Protein–RNA interactions for Protein: Q96DD7

SHISA4, Protein shisa-4, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4Q96DD7 Y_RNA.267-201ENST00000364679 109 ntBASIC2.73□□□□□ -1.97
SHISA4Q96DD7 RNU1-51P-201ENST00000365345 176 ntBASIC2.73□□□□□ -1.97
SHISA4Q96DD7 MIR802-201ENST00000390235 94 ntBASIC2.73□□□□□ -1.97
SHISA4Q96DD7 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
SHISA4Q96DD7 RPL23AP42-201ENST00000471152 471 ntBASIC2.73□□□□□ -1.97
SHISA4Q96DD7 COX6CP6-201ENST00000490840 228 ntBASIC2.73□□□□□ -1.97
SHISA4Q96DD7 AC023141.11-201ENST00000508864 202 ntBASIC2.73□□□□□ -1.97
SHISA4Q96DD7 RNU6-1053P-201ENST00000515930 101 ntBASIC2.73□□□□□ -1.97
SHISA4Q96DD7 RNU1-142P-201ENST00000516682 145 ntBASIC2.73□□□□□ -1.97
SHISA4Q96DD7 RPPH1-2P-201ENST00000516688 293 ntBASIC2.73□□□□□ -1.97
SHISA4Q96DD7 AC022217.4-201ENST00000604389 163 ntBASIC2.73□□□□□ -1.97
SHISA4Q96DD7 AC010297.1-201ENST00000623948 149 ntBASIC2.73□□□□□ -1.97
SHISA4Q96DD7 ZNF271P-202ENST00000465539 1970 ntBASIC2.72□□□□□ -1.97
SHISA4Q96DD7 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
SHISA4Q96DD7 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
SHISA4Q96DD7 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
SHISA4Q96DD7 MIR340-201ENST00000362125 95 ntBASIC2.72□□□□□ -1.97
SHISA4Q96DD7 SNORD73B-201ENST00000364394 72 ntBASIC2.72□□□□□ -1.97
SHISA4Q96DD7 RNU1-91P-201ENST00000364746 163 ntBASIC2.72□□□□□ -1.97
SHISA4Q96DD7 DEFA7P-201ENST00000382676 285 ntBASIC2.72□□□□□ -1.97
SHISA4Q96DD7 Y_RNA.508-201ENST00000384502 114 ntBASIC2.72□□□□□ -1.97
SHISA4Q96DD7 SNORA64-201ENST00000384674 134 ntBASIC2.72□□□□□ -1.97
SHISA4Q96DD7 MIR627-201ENST00000384979 97 ntBASIC2.72□□□□□ -1.97
SHISA4Q96DD7 MIR561-201ENST00000385216 97 ntBASIC2.72□□□□□ -1.97
SHISA4Q96DD7 SNORD12C-201ENST00000386307 89 ntBASIC2.72□□□□□ -1.97
SHISA4Q96DD7 SNORD77.3-201ENST00000391113 65 ntBASIC2.72□□□□□ -1.97
SHISA4Q96DD7 RNY4P30-201ENST00000410216 95 ntBASIC2.72□□□□□ -1.97
SHISA4Q96DD7 CALM2P4-201ENST00000430810 426 ntBASIC2.72□□□□□ -1.97
SHISA4Q96DD7 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.72□□□□□ -1.97
SHISA4Q96DD7 AC108729.3-201ENST00000513484 108 ntBASIC2.72□□□□□ -1.97
SHISA4Q96DD7 MIR4781-201ENST00000585250 76 ntBASIC2.72□□□□□ -1.97
SHISA4Q96DD7 AL355297.2-201ENST00000604792 129 ntBASIC2.72□□□□□ -1.97
SHISA4Q96DD7 AL137847.3-201ENST00000611521 109 ntBASIC2.72□□□□□ -1.97
SHISA4Q96DD7 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.72□□□□□ -1.97
SHISA4Q96DD7 Y_RNA.85-201ENST00000363014 111 ntBASIC2.71□□□□□ -1.98
SHISA4Q96DD7 Y_RNA.388-201ENST00000383919 113 ntBASIC2.71□□□□□ -1.98
SHISA4Q96DD7 RNU1-109P-201ENST00000383960 147 ntBASIC2.71□□□□□ -1.98
SHISA4Q96DD7 SNORA80E-201ENST00000384744 137 ntBASIC2.71□□□□□ -1.98
SHISA4Q96DD7 RNA5SP467-201ENST00000391274 118 ntBASIC2.71□□□□□ -1.98
SHISA4Q96DD7 RNU6-554P-201ENST00000410466 106 ntBASIC2.71□□□□□ -1.98
SHISA4Q96DD7 RNA5SP492-201ENST00000411330 114 ntBASIC2.71□□□□□ -1.98
SHISA4Q96DD7 EDDM3CP-201ENST00000415977 425 ntBASIC2.71□□□□□ -1.98
SHISA4Q96DD7 AL353689.1-201ENST00000438895 199 ntBASIC2.71□□□□□ -1.98
SHISA4Q96DD7 RNU6-1041P-201ENST00000516254 102 ntBASIC2.71□□□□□ -1.98
SHISA4Q96DD7 RNU7-128P-201ENST00000517247 62 ntBASIC2.71□□□□□ -1.98
SHISA4Q96DD7 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.71□□□□□ -1.98
SHISA4Q96DD7 AC004486.1-201ENST00000546846 233 ntBASIC2.71□□□□□ -1.98
SHISA4Q96DD7 AC092881.1-201ENST00000638218 2733 ntBASIC2.71□□□□□ -1.98
SHISA4Q96DD7 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.71□□□□□ -1.98
SHISA4Q96DD7 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
SHISA4Q96DD7 MIR6073-201ENST00000352083 89 ntBASIC2.7□□□□□ -1.98
SHISA4Q96DD7 MIR1302-5-201ENST00000408164 150 ntBASIC2.7□□□□□ -1.98
SHISA4Q96DD7 RNU2-48P-201ENST00000410694 191 ntBASIC2.7□□□□□ -1.98
SHISA4Q96DD7 FTH1P12-201ENST00000432137 551 ntBASIC2.7□□□□□ -1.98
SHISA4Q96DD7 RNU7-94P-201ENST00000459576 63 ntBASIC2.7□□□□□ -1.98
SHISA4Q96DD7 AL049830.1-201ENST00000468034 425 ntBASIC2.7□□□□□ -1.98
SHISA4Q96DD7 SCARNA15-202ENST00000516881 127 ntBASIC2.7□□□□□ -1.98
SHISA4Q96DD7 MIR3670-2-201ENST00000582974 65 ntBASIC2.7□□□□□ -1.98
SHISA4Q96DD7 MIR3670-1-201ENST00000584160 65 ntBASIC2.7□□□□□ -1.98
SHISA4Q96DD7 MIR3670-3-201ENST00000584855 65 ntBASIC2.7□□□□□ -1.98
SHISA4Q96DD7 MIR3670-4-201ENST00000612260 65 ntBASIC2.7□□□□□ -1.98
SHISA4Q96DD7 AL591926.4-201ENST00000616895 298 ntBASIC2.7□□□□□ -1.98
SHISA4Q96DD7 MIR338-201ENST00000636369 67 ntBASIC2.7□□□□□ -1.98
SHISA4Q96DD7 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC2.7□□□□□ -1.98
SHISA4Q96DD7 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
SHISA4Q96DD7 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.69□□□□□ -1.98
SHISA4Q96DD7 RNU6-766P-201ENST00000362478 107 ntBASIC2.69□□□□□ -1.98
SHISA4Q96DD7 Y_RNA.366-201ENST00000365540 102 ntBASIC2.69□□□□□ -1.98
SHISA4Q96DD7 MIR548A2-201ENST00000384956 97 ntBASIC2.69□□□□□ -1.98
SHISA4Q96DD7 RNA5SP323-201ENST00000391094 133 ntBASIC2.69□□□□□ -1.98
SHISA4Q96DD7 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.69□□□□□ -1.98
SHISA4Q96DD7 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC2.69□□□□□ -1.98
SHISA4Q96DD7 AP002004.2-201ENST00000531656 154 ntBASIC2.69□□□□□ -1.98
SHISA4Q96DD7 MIR5197-201ENST00000583721 112 ntBASIC2.69□□□□□ -1.98
SHISA4Q96DD7 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.69□□□□□ -1.98
SHISA4Q96DD7 AL353149.1-201ENST00000610667 244 ntBASIC2.69□□□□□ -1.98
SHISA4Q96DD7 AC134878.1-201ENST00000619901 243 ntBASIC2.69□□□□□ -1.98
SHISA4Q96DD7 MIR6873-201ENST00000622788 63 ntBASIC2.69□□□□□ -1.98
SHISA4Q96DD7 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
SHISA4Q96DD7 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.69□□□□□ -1.98
SHISA4Q96DD7 Y_RNA.49-201ENST00000362714 112 ntBASIC2.68□□□□□ -1.98
SHISA4Q96DD7 Y_RNA.410-201ENST00000383992 113 ntBASIC2.68□□□□□ -1.98
SHISA4Q96DD7 MIR515-2-201ENST00000384883 83 ntBASIC2.68□□□□□ -1.98
SHISA4Q96DD7 MIR515-1-201ENST00000384884 83 ntBASIC2.68□□□□□ -1.98
SHISA4Q96DD7 MIR518F-201ENST00000384973 87 ntBASIC2.68□□□□□ -1.98
SHISA4Q96DD7 MIR522-201ENST00000385071 87 ntBASIC2.68□□□□□ -1.98
SHISA4Q96DD7 MIR1302-4-201ENST00000408701 150 ntBASIC2.68□□□□□ -1.98
SHISA4Q96DD7 RPS26P48-201ENST00000491713 339 ntBASIC2.68□□□□□ -1.98
SHISA4Q96DD7 RNU6-667P-201ENST00000517186 102 ntBASIC2.68□□□□□ -1.98
SHISA4Q96DD7 AC009831.4-201ENST00000620744 325 ntBASIC2.68□□□□□ -1.98
SHISA4Q96DD7 AL589743.1-201ENST00000551932 2712 ntBASIC2.67□□□□□ -1.98
SHISA4Q96DD7 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
SHISA4Q96DD7 VTRNA1-1-201ENST00000363120 99 ntBASIC2.67□□□□□ -1.98
SHISA4Q96DD7 Y_RNA.163-201ENST00000363702 113 ntBASIC2.67□□□□□ -1.98
SHISA4Q96DD7 Y_RNA.355-201ENST00000365462 98 ntBASIC2.67□□□□□ -1.98
SHISA4Q96DD7 RNU6-756P-201ENST00000383997 107 ntBASIC2.67□□□□□ -1.98
SHISA4Q96DD7 RNU6-1113P-201ENST00000384348 107 ntBASIC2.67□□□□□ -1.98
SHISA4Q96DD7 MIR759-201ENST00000390224 91 ntBASIC2.67□□□□□ -1.98
SHISA4Q96DD7 SRIP3-201ENST00000413200 219 ntBASIC2.67□□□□□ -1.98
SHISA4Q96DD7 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.67□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 184 ms