Protein–RNA interactions for Protein: Q96DB2

HDAC11, Histone deacetylase 11, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11Q96DB2 MIR548F4-201ENST00000408515 105 ntBASIC1.15□□□□□ -2.23
HDAC11Q96DB2 MIR1285-1-201ENST00000408593 84 ntBASIC1.15□□□□□ -2.23
HDAC11Q96DB2 MIR548J-201ENST00000408833 112 ntBASIC1.15□□□□□ -2.23
HDAC11Q96DB2 HSPE1P25-201ENST00000455484 251 ntBASIC1.15□□□□□ -2.23
HDAC11Q96DB2 RPS29P1-201ENST00000465274 159 ntBASIC1.15□□□□□ -2.23
HDAC11Q96DB2 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.15□□□□□ -2.23
HDAC11Q96DB2 RNU6-496P-201ENST00000516145 99 ntBASIC1.15□□□□□ -2.23
HDAC11Q96DB2 RNU7-115P-201ENST00000516433 55 ntBASIC1.15□□□□□ -2.23
HDAC11Q96DB2 AC127455.1-201ENST00000565496 145 ntBASIC1.15□□□□□ -2.23
HDAC11Q96DB2 MIR376A1-201ENST00000616574 68 ntBASIC1.15□□□□□ -2.23
HDAC11Q96DB2 MIR548AY-201ENST00000617669 107 ntBASIC1.15□□□□□ -2.23
HDAC11Q96DB2 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
HDAC11Q96DB2 MIR96-201ENST00000362288 78 ntBASIC1.14□□□□□ -2.23
HDAC11Q96DB2 Y_RNA.136-201ENST00000363444 102 ntBASIC1.14□□□□□ -2.23
HDAC11Q96DB2 RNU6-770P-201ENST00000363929 105 ntBASIC1.14□□□□□ -2.23
HDAC11Q96DB2 Y_RNA.203-201ENST00000364106 102 ntBASIC1.14□□□□□ -2.23
HDAC11Q96DB2 SNORD50B-201ENST00000364995 70 ntBASIC1.14□□□□□ -2.23
HDAC11Q96DB2 MIR136-201ENST00000385207 82 ntBASIC1.14□□□□□ -2.23
HDAC11Q96DB2 Y_RNA.581-201ENST00000391017 97 ntBASIC1.14□□□□□ -2.23
HDAC11Q96DB2 RNU6ATAC19P-201ENST00000408096 110 ntBASIC1.14□□□□□ -2.23
HDAC11Q96DB2 AC113618.1-201ENST00000416747 285 ntBASIC1.14□□□□□ -2.23
HDAC11Q96DB2 AC131281.1-201ENST00000522984 164 ntBASIC1.14□□□□□ -2.23
HDAC11Q96DB2 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
HDAC11Q96DB2 Y_RNA.26-201ENST00000362539 101 ntBASIC1.13□□□□□ -2.23
HDAC11Q96DB2 snoU2_19.2-201ENST00000363024 80 ntBASIC1.13□□□□□ -2.23
HDAC11Q96DB2 SNORA63-201ENST00000363450 132 ntBASIC1.13□□□□□ -2.23
HDAC11Q96DB2 SNORD113-8-201ENST00000363497 74 ntBASIC1.13□□□□□ -2.23
HDAC11Q96DB2 Y_RNA.363-201ENST00000365529 113 ntBASIC1.13□□□□□ -2.23
HDAC11Q96DB2 Y_RNA.518-201ENST00000384552 113 ntBASIC1.13□□□□□ -2.23
HDAC11Q96DB2 MIR606-201ENST00000384851 96 ntBASIC1.13□□□□□ -2.23
HDAC11Q96DB2 RNU6-1109P-201ENST00000391187 107 ntBASIC1.13□□□□□ -2.23
HDAC11Q96DB2 Y_RNA.602-201ENST00000410535 92 ntBASIC1.13□□□□□ -2.23
HDAC11Q96DB2 MRPL35P3-201ENST00000421557 364 ntBASIC1.13□□□□□ -2.23
HDAC11Q96DB2 HMGN2P32-201ENST00000444648 269 ntBASIC1.13□□□□□ -2.23
HDAC11Q96DB2 AC087343.1-201ENST00000477341 475 ntBASIC1.13□□□□□ -2.23
HDAC11Q96DB2 SNORD116-28-201ENST00000516123 91 ntBASIC1.13□□□□□ -2.23
HDAC11Q96DB2 AC090142.3-201ENST00000519012 385 ntBASIC1.13□□□□□ -2.23
HDAC11Q96DB2 AC006504.6-201ENST00000590142 199 ntBASIC1.13□□□□□ -2.23
HDAC11Q96DB2 JPX_2.1-201ENST00000614161 69 ntBASIC1.13□□□□□ -2.23
HDAC11Q96DB2 Y_RNA.145-201ENST00000363527 102 ntBASIC1.12□□□□□ -2.23
HDAC11Q96DB2 RNU6-1048P-201ENST00000364054 107 ntBASIC1.12□□□□□ -2.23
HDAC11Q96DB2 RNU6-806P-201ENST00000365147 105 ntBASIC1.12□□□□□ -2.23
HDAC11Q96DB2 Y_RNA.374-201ENST00000365606 101 ntBASIC1.12□□□□□ -2.23
HDAC11Q96DB2 RNU6-102P-201ENST00000384485 104 ntBASIC1.12□□□□□ -2.23
HDAC11Q96DB2 RNU6-1248P-201ENST00000391096 64 ntBASIC1.12□□□□□ -2.23
HDAC11Q96DB2 AL731563.1-201ENST00000442202 214 ntBASIC1.12□□□□□ -2.23
HDAC11Q96DB2 SNORD79.1-201ENST00000516069 84 ntBASIC1.12□□□□□ -2.23
HDAC11Q96DB2 RNU6-1143P-201ENST00000516125 104 ntBASIC1.12□□□□□ -2.23
HDAC11Q96DB2 SCARNA15.1-201ENST00000516384 125 ntBASIC1.12□□□□□ -2.23
HDAC11Q96DB2 RNU6-113P-201ENST00000516653 101 ntBASIC1.12□□□□□ -2.23
HDAC11Q96DB2 Y_RNA.720-201ENST00000517166 92 ntBASIC1.12□□□□□ -2.23
HDAC11Q96DB2 AC136628.3-201ENST00000521868 290 ntBASIC1.12□□□□□ -2.23
HDAC11Q96DB2 MIR4295-201ENST00000585286 85 ntBASIC1.12□□□□□ -2.23
HDAC11Q96DB2 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.12□□□□□ -2.23
HDAC11Q96DB2 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.12□□□□□ -2.23
HDAC11Q96DB2 Y_RNA.152-201ENST00000363578 100 ntBASIC1.11□□□□□ -2.23
HDAC11Q96DB2 RNU1-124P-201ENST00000363861 145 ntBASIC1.11□□□□□ -2.23
HDAC11Q96DB2 Y_RNA.210-201ENST00000364161 110 ntBASIC1.11□□□□□ -2.23
HDAC11Q96DB2 Y_RNA.418-201ENST00000384029 102 ntBASIC1.11□□□□□ -2.23
HDAC11Q96DB2 AC063976.4-201ENST00000421971 163 ntBASIC1.11□□□□□ -2.23
HDAC11Q96DB2 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.11□□□□□ -2.23
HDAC11Q96DB2 RPS29P28-201ENST00000446439 141 ntBASIC1.11□□□□□ -2.23
HDAC11Q96DB2 RNU7-141P-201ENST00000459304 62 ntBASIC1.11□□□□□ -2.23
HDAC11Q96DB2 AC098869.1-201ENST00000481627 292 ntBASIC1.11□□□□□ -2.23
HDAC11Q96DB2 MRPS35P2-201ENST00000508242 191 ntBASIC1.11□□□□□ -2.23
HDAC11Q96DB2 SNORA74.3-201ENST00000517108 154 ntBASIC1.11□□□□□ -2.23
HDAC11Q96DB2 AL117187.1-201ENST00000555482 181 ntBASIC1.11□□□□□ -2.23
HDAC11Q96DB2 RN7SL793P-201ENST00000583259 296 ntBASIC1.11□□□□□ -2.23
HDAC11Q96DB2 MIR3192-201ENST00000584920 77 ntBASIC1.11□□□□□ -2.23
HDAC11Q96DB2 AC007742.2-201ENST00000618226 398 ntBASIC1.11□□□□□ -2.23
HDAC11Q96DB2 AC099654.10-201ENST00000640395 161 ntBASIC1.11□□□□□ -2.23
HDAC11Q96DB2 Y_RNA.19-201ENST00000362462 99 ntBASIC1.1□□□□□ -2.23
HDAC11Q96DB2 RNU6-1209P-201ENST00000363655 107 ntBASIC1.1□□□□□ -2.23
HDAC11Q96DB2 SNORD14E-201ENST00000364009 85 ntBASIC1.1□□□□□ -2.23
HDAC11Q96DB2 SNORA80D-201ENST00000384488 135 ntBASIC1.1□□□□□ -2.23
HDAC11Q96DB2 MIR15B-201ENST00000385045 98 ntBASIC1.1□□□□□ -2.23
HDAC11Q96DB2 SNORD12-201ENST00000391002 90 ntBASIC1.1□□□□□ -2.23
HDAC11Q96DB2 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.1□□□□□ -2.23
HDAC11Q96DB2 SNORA36B-201ENST00000410438 131 ntBASIC1.1□□□□□ -2.23
HDAC11Q96DB2 RNU2-14P-201ENST00000411053 191 ntBASIC1.1□□□□□ -2.23
HDAC11Q96DB2 AL358176.2-201ENST00000425769 204 ntBASIC1.1□□□□□ -2.23
HDAC11Q96DB2 MTND5P22-201ENST00000458380 195 ntBASIC1.1□□□□□ -2.23
HDAC11Q96DB2 OR2A41P-201ENST00000473586 105 ntBASIC1.1□□□□□ -2.23
HDAC11Q96DB2 SNORA18.7-201ENST00000516910 131 ntBASIC1.1□□□□□ -2.23
HDAC11Q96DB2 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC1.1□□□□□ -2.23
HDAC11Q96DB2 RNU4-90P-201ENST00000362773 141 ntBASIC1.09□□□□□ -2.23
HDAC11Q96DB2 Y_RNA.64-201ENST00000362845 102 ntBASIC1.09□□□□□ -2.23
HDAC11Q96DB2 RNU6-801P-201ENST00000364087 105 ntBASIC1.09□□□□□ -2.23
HDAC11Q96DB2 SNORA72.4-201ENST00000384174 132 ntBASIC1.09□□□□□ -2.23
HDAC11Q96DB2 Y_RNA.541-201ENST00000384640 113 ntBASIC1.09□□□□□ -2.23
HDAC11Q96DB2 MIR215-201ENST00000384858 110 ntBASIC1.09□□□□□ -2.23
HDAC11Q96DB2 MIR520C-201ENST00000385005 87 ntBASIC1.09□□□□□ -2.23
HDAC11Q96DB2 RPL21P38-201ENST00000418090 167 ntBASIC1.09□□□□□ -2.23
HDAC11Q96DB2 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC1.09□□□□□ -2.23
HDAC11Q96DB2 AC002429.1-201ENST00000437672 148 ntBASIC1.09□□□□□ -2.23
HDAC11Q96DB2 AC245047.8-201ENST00000456455 284 ntBASIC1.09□□□□□ -2.23
HDAC11Q96DB2 snoU13.25-201ENST00000458945 104 ntBASIC1.09□□□□□ -2.23
HDAC11Q96DB2 RNU6-437P-201ENST00000459408 95 ntBASIC1.09□□□□□ -2.23
HDAC11Q96DB2 RPS23P4-201ENST00000487908 423 ntBASIC1.09□□□□□ -2.23
HDAC11Q96DB2 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.09□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 202.7 ms