Protein–RNA interactions for Protein: Q969G2

LHX4, LIM/homeobox protein Lhx4, humanhuman

Predictions only

Length 390 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX4Q969G2 Y_RNA.535-201ENST00000384612 99 ntBASIC0.84□□□□□ -2.27
LHX4Q969G2 MIR200A-201ENST00000384875 90 ntBASIC0.84□□□□□ -2.27
LHX4Q969G2 RNU6-988P-201ENST00000519081 107 ntBASIC0.84□□□□□ -2.27
LHX4Q969G2 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.84□□□□□ -2.27
LHX4Q969G2 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC0.84□□□□□ -2.27
LHX4Q969G2 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC0.84□□□□□ -2.27
LHX4Q969G2 MIR4452-201ENST00000583004 71 ntBASIC0.84□□□□□ -2.27
LHX4Q969G2 AC008507.4-201ENST00000585464 127 ntBASIC0.84□□□□□ -2.27
LHX4Q969G2 Y_RNA.61-201ENST00000362835 102 ntBASIC0.83□□□□□ -2.28
LHX4Q969G2 Y_RNA.105-201ENST00000363182 111 ntBASIC0.83□□□□□ -2.28
LHX4Q969G2 SNORA25.3-201ENST00000363205 127 ntBASIC0.83□□□□□ -2.28
LHX4Q969G2 Y_RNA.128-201ENST00000363391 112 ntBASIC0.83□□□□□ -2.28
LHX4Q969G2 RNU6-1187P-201ENST00000364771 110 ntBASIC0.83□□□□□ -2.28
LHX4Q969G2 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC0.83□□□□□ -2.28
LHX4Q969G2 Y_RNA.581-201ENST00000391017 97 ntBASIC0.83□□□□□ -2.28
LHX4Q969G2 MIR1185-1-201ENST00000408598 86 ntBASIC0.83□□□□□ -2.28
LHX4Q969G2 MIR1278-201ENST00000408753 81 ntBASIC0.83□□□□□ -2.28
LHX4Q969G2 SNORD11-201ENST00000459124 84 ntBASIC0.83□□□□□ -2.28
LHX4Q969G2 RN7SKP164-201ENST00000516138 266 ntBASIC0.83□□□□□ -2.28
LHX4Q969G2 Y_RNA.673-201ENST00000516306 88 ntBASIC0.83□□□□□ -2.28
LHX4Q969G2 RNU6-764P-201ENST00000516396 105 ntBASIC0.83□□□□□ -2.28
LHX4Q969G2 RPL23AP91-201ENST00000569211 455 ntBASIC0.83□□□□□ -2.28
LHX4Q969G2 AC134503.1-201ENST00000633048 54 ntBASIC0.83□□□□□ -2.28
LHX4Q969G2 SNORA22B-201ENST00000383876 138 ntBASIC0.82□□□□□ -2.28
LHX4Q969G2 Y_RNA.569-201ENST00000384749 103 ntBASIC0.82□□□□□ -2.28
LHX4Q969G2 MIR802-201ENST00000390235 94 ntBASIC0.82□□□□□ -2.28
LHX4Q969G2 RNU6-121P-201ENST00000410525 99 ntBASIC0.82□□□□□ -2.28
LHX4Q969G2 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC0.82□□□□□ -2.28
LHX4Q969G2 MTCO1P5-201ENST00000433573 344 ntBASIC0.82□□□□□ -2.28
LHX4Q969G2 RPL39P28-201ENST00000465655 155 ntBASIC0.82□□□□□ -2.28
LHX4Q969G2 RNU6-830P-201ENST00000516353 107 ntBASIC0.82□□□□□ -2.28
LHX4Q969G2 RNU6-113P-201ENST00000516653 101 ntBASIC0.82□□□□□ -2.28
LHX4Q969G2 Y_RNA.711-201ENST00000516993 102 ntBASIC0.82□□□□□ -2.28
LHX4Q969G2 SEPT14P17-201ENST00000617978 177 ntBASIC0.82□□□□□ -2.28
LHX4Q969G2 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.82□□□□□ -2.28
LHX4Q969G2 AC134026.1-201ENST00000623249 2239 ntBASIC0.82□□□□□ -2.28
LHX4Q969G2 Y_RNA.138-201ENST00000363462 102 ntBASIC0.81□□□□□ -2.28
LHX4Q969G2 RNU6-899P-201ENST00000363947 107 ntBASIC0.81□□□□□ -2.28
LHX4Q969G2 RNU6-268P-201ENST00000364174 107 ntBASIC0.81□□□□□ -2.28
LHX4Q969G2 RNU4-38P-201ENST00000364472 129 ntBASIC0.81□□□□□ -2.28
LHX4Q969G2 Y_RNA.380-201ENST00000365663 111 ntBASIC0.81□□□□□ -2.28
LHX4Q969G2 RNU6-763P-201ENST00000390865 106 ntBASIC0.81□□□□□ -2.28
LHX4Q969G2 SNORD28B-201ENST00000390993 75 ntBASIC0.81□□□□□ -2.28
LHX4Q969G2 SNORD72-201ENST00000390994 80 ntBASIC0.81□□□□□ -2.28
LHX4Q969G2 MTCO2P33-201ENST00000402100 465 ntBASIC0.81□□□□□ -2.28
LHX4Q969G2 AL603910.2-201ENST00000407268 136 ntBASIC0.81□□□□□ -2.28
LHX4Q969G2 MIR548P-201ENST00000408336 84 ntBASIC0.81□□□□□ -2.28
LHX4Q969G2 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.81□□□□□ -2.28
LHX4Q969G2 AC008133.2-201ENST00000624540 351 ntBASIC0.81□□□□□ -2.28
LHX4Q969G2 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
LHX4Q969G2 RNU6-290P-201ENST00000365212 101 ntBASIC0.8□□□□□ -2.28
LHX4Q969G2 Y_RNA.330-201ENST00000365230 109 ntBASIC0.8□□□□□ -2.28
LHX4Q969G2 RNU2-64P-201ENST00000411315 191 ntBASIC0.8□□□□□ -2.28
LHX4Q969G2 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC0.8□□□□□ -2.28
LHX4Q969G2 PDCD5P2-201ENST00000507570 312 ntBASIC0.8□□□□□ -2.28
LHX4Q969G2 MRPS35P2-201ENST00000508242 191 ntBASIC0.8□□□□□ -2.28
LHX4Q969G2 MIR548AR-201ENST00000582191 57 ntBASIC0.8□□□□□ -2.28
LHX4Q969G2 AC211469.2-201ENST00000605461 205 ntBASIC0.8□□□□□ -2.28
LHX4Q969G2 Pinc.1-201ENST00000616452 154 ntBASIC0.8□□□□□ -2.28
LHX4Q969G2 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.79□□□□□ -2.28
LHX4Q969G2 Y_RNA.116-201ENST00000363292 103 ntBASIC0.79□□□□□ -2.28
LHX4Q969G2 Y_RNA.158-201ENST00000363651 101 ntBASIC0.79□□□□□ -2.28
LHX4Q969G2 RNU1-93P-201ENST00000364704 169 ntBASIC0.79□□□□□ -2.28
LHX4Q969G2 MIR520E-201ENST00000384867 87 ntBASIC0.79□□□□□ -2.28
LHX4Q969G2 MIR518E-201ENST00000385252 88 ntBASIC0.79□□□□□ -2.28
LHX4Q969G2 MIR942-201ENST00000401111 86 ntBASIC0.79□□□□□ -2.28
LHX4Q969G2 MTCO2P12-201ENST00000427426 682 ntBASIC0.79□□□□□ -2.28
LHX4Q969G2 SNORA40.15-201ENST00000516884 107 ntBASIC0.79□□□□□ -2.28
LHX4Q969G2 AL078603.1-201ENST00000603824 313 ntBASIC0.79□□□□□ -2.28
LHX4Q969G2 AC006441.5-201ENST00000612680 209 ntBASIC0.79□□□□□ -2.28
LHX4Q969G2 MIR4251-201ENST00000635819 61 ntBASIC0.79□□□□□ -2.28
LHX4Q969G2 RNU6-1205P-201ENST00000363625 106 ntBASIC0.78□□□□□ -2.28
LHX4Q969G2 Y_RNA.242-201ENST00000364473 110 ntBASIC0.78□□□□□ -2.28
LHX4Q969G2 Y_RNA.276-201ENST00000364732 109 ntBASIC0.78□□□□□ -2.28
LHX4Q969G2 RNU6-144P-201ENST00000383951 107 ntBASIC0.78□□□□□ -2.28
LHX4Q969G2 Y_RNA.455-201ENST00000384230 98 ntBASIC0.78□□□□□ -2.28
LHX4Q969G2 ELOCP20-201ENST00000422460 345 ntBASIC0.78□□□□□ -2.28
LHX4Q969G2 MTND4LP30-201ENST00000454092 297 ntBASIC0.78□□□□□ -2.28
LHX4Q969G2 Y_RNA.637-201ENST00000459424 114 ntBASIC0.78□□□□□ -2.28
LHX4Q969G2 RPS29P1-201ENST00000465274 159 ntBASIC0.78□□□□□ -2.28
LHX4Q969G2 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC0.78□□□□□ -2.28
LHX4Q969G2 RNU6-1007P-201ENST00000516586 107 ntBASIC0.78□□□□□ -2.28
LHX4Q969G2 AC131281.1-201ENST00000522984 164 ntBASIC0.78□□□□□ -2.28
LHX4Q969G2 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC0.78□□□□□ -2.28
LHX4Q969G2 AC113195.1-201ENST00000579952 141 ntBASIC0.78□□□□□ -2.28
LHX4Q969G2 AC131055.1-201ENST00000584626 316 ntBASIC0.78□□□□□ -2.28
LHX4Q969G2 AL355297.3-201ENST00000604082 446 ntBASIC0.78□□□□□ -2.28
LHX4Q969G2 MIR6767-201ENST00000637302 66 ntBASIC0.78□□□□□ -2.28
LHX4Q969G2 RNU6-1272P-201ENST00000362776 107 ntBASIC0.77□□□□□ -2.29
LHX4Q969G2 snoU2_19.2-201ENST00000363024 80 ntBASIC0.77□□□□□ -2.29
LHX4Q969G2 Y_RNA.214-201ENST00000364201 112 ntBASIC0.77□□□□□ -2.29
LHX4Q969G2 Y_RNA.216-201ENST00000364205 93 ntBASIC0.77□□□□□ -2.29
LHX4Q969G2 Y_RNA.269-201ENST00000364685 89 ntBASIC0.77□□□□□ -2.29
LHX4Q969G2 Y_RNA.541-201ENST00000384640 113 ntBASIC0.77□□□□□ -2.29
LHX4Q969G2 U8.17-201ENST00000391292 132 ntBASIC0.77□□□□□ -2.29
LHX4Q969G2 MIR1302-7-201ENST00000408841 72 ntBASIC0.77□□□□□ -2.29
LHX4Q969G2 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.77□□□□□ -2.29
LHX4Q969G2 AL392103.1-201ENST00000447000 198 ntBASIC0.77□□□□□ -2.29
LHX4Q969G2 ACA64.5-201ENST00000516207 127 ntBASIC0.77□□□□□ -2.29
LHX4Q969G2 RNA5SP255-201ENST00000516370 107 ntBASIC0.77□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 298.7 ms