Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.97□□□□□ -2.09
HPS3Q969F9 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.97□□□□□ -2.09
HPS3Q969F9 SNORD45.4-201ENST00000516629 73 ntBASIC1.97□□□□□ -2.09
HPS3Q969F9 AC130289.1-201ENST00000577321 73 ntBASIC1.97□□□□□ -2.09
HPS3Q969F9 AL049861.1-201ENST00000603130 150 ntBASIC1.97□□□□□ -2.09
HPS3Q969F9 AL021707.8-201ENST00000609428 183 ntBASIC1.97□□□□□ -2.09
HPS3Q969F9 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.97□□□□□ -2.09
HPS3Q969F9 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.97□□□□□ -2.09
HPS3Q969F9 MIR411-201ENST00000362239 96 ntBASIC1.96□□□□□ -2.1
HPS3Q969F9 RNU6-833P-201ENST00000363486 107 ntBASIC1.96□□□□□ -2.1
HPS3Q969F9 RNU6-923P-201ENST00000364753 107 ntBASIC1.96□□□□□ -2.1
HPS3Q969F9 RNY3P5-201ENST00000384127 102 ntBASIC1.96□□□□□ -2.1
HPS3Q969F9 Y_RNA.572-201ENST00000384757 98 ntBASIC1.96□□□□□ -2.1
HPS3Q969F9 Y_RNA.587-201ENST00000391210 103 ntBASIC1.96□□□□□ -2.1
HPS3Q969F9 RNU6-381P-201ENST00000391259 108 ntBASIC1.96□□□□□ -2.1
HPS3Q969F9 RNU6-493P-201ENST00000391321 108 ntBASIC1.96□□□□□ -2.1
HPS3Q969F9 PIGPP3-201ENST00000425307 415 ntBASIC1.96□□□□□ -2.1
HPS3Q969F9 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.96□□□□□ -2.1
HPS3Q969F9 AC114811.1-201ENST00000507207 168 ntBASIC1.96□□□□□ -2.1
HPS3Q969F9 RNY3P16-201ENST00000516338 101 ntBASIC1.96□□□□□ -2.1
HPS3Q969F9 SNORA77B-201ENST00000578179 125 ntBASIC1.96□□□□□ -2.1
HPS3Q969F9 AL391903.3-201ENST00000612158 163 ntBASIC1.96□□□□□ -2.1
HPS3Q969F9 AC095038.3-201ENST00000634439 195 ntBASIC1.96□□□□□ -2.1
HPS3Q969F9 Y_RNA.7-201ENST00000362352 102 ntBASIC1.95□□□□□ -2.1
HPS3Q969F9 RNU6-200P-201ENST00000364743 107 ntBASIC1.95□□□□□ -2.1
HPS3Q969F9 SNORD50B-201ENST00000364995 70 ntBASIC1.95□□□□□ -2.1
HPS3Q969F9 Y_RNA.336-201ENST00000365307 109 ntBASIC1.95□□□□□ -2.1
HPS3Q969F9 AL161935.2-201ENST00000414627 60 ntBASIC1.95□□□□□ -2.1
HPS3Q969F9 AL138752.1-201ENST00000452964 351 ntBASIC1.95□□□□□ -2.1
HPS3Q969F9 AC245047.8-201ENST00000456455 284 ntBASIC1.95□□□□□ -2.1
HPS3Q969F9 NDUFA4P2-201ENST00000489989 244 ntBASIC1.95□□□□□ -2.1
HPS3Q969F9 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC1.95□□□□□ -2.1
HPS3Q969F9 RNU6-126P-201ENST00000516685 103 ntBASIC1.95□□□□□ -2.1
HPS3Q969F9 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
HPS3Q969F9 AC090425.1-201ENST00000610007 140 ntBASIC1.95□□□□□ -2.1
HPS3Q969F9 ICE2P2-201ENST00000483823 2787 ntBASIC1.95□□□□□ -2.1
HPS3Q969F9 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
HPS3Q969F9 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.94□□□□□ -2.1
HPS3Q969F9 RNU1-17P-201ENST00000363022 152 ntBASIC1.94□□□□□ -2.1
HPS3Q969F9 RNU6-1020P-201ENST00000363684 107 ntBASIC1.94□□□□□ -2.1
HPS3Q969F9 snoU2_19.4-201ENST00000364329 80 ntBASIC1.94□□□□□ -2.1
HPS3Q969F9 Y_RNA.297-201ENST00000364950 91 ntBASIC1.94□□□□□ -2.1
HPS3Q969F9 RNU6-1318P-201ENST00000365389 103 ntBASIC1.94□□□□□ -2.1
HPS3Q969F9 RNU6-442P-201ENST00000383968 104 ntBASIC1.94□□□□□ -2.1
HPS3Q969F9 MIR513A1-201ENST00000385138 129 ntBASIC1.94□□□□□ -2.1
HPS3Q969F9 RNU6-1228P-201ENST00000391014 107 ntBASIC1.94□□□□□ -2.1
HPS3Q969F9 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC1.94□□□□□ -2.1
HPS3Q969F9 Y_RNA.700-201ENST00000516806 100 ntBASIC1.94□□□□□ -2.1
HPS3Q969F9 RNU6-1116P-201ENST00000517269 99 ntBASIC1.94□□□□□ -2.1
HPS3Q969F9 SUMO2P16-201ENST00000519475 264 ntBASIC1.94□□□□□ -2.1
HPS3Q969F9 MIR4778-201ENST00000577635 80 ntBASIC1.94□□□□□ -2.1
HPS3Q969F9 MIR4662B-201ENST00000579498 81 ntBASIC1.94□□□□□ -2.1
HPS3Q969F9 AC008507.4-201ENST00000585464 127 ntBASIC1.94□□□□□ -2.1
HPS3Q969F9 AC084768.2-201ENST00000622736 221 ntBASIC1.94□□□□□ -2.1
HPS3Q969F9 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.94□□□□□ -2.1
HPS3Q969F9 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
HPS3Q969F9 Y_RNA.4-201ENST00000362333 112 ntBASIC1.93□□□□□ -2.1
HPS3Q969F9 Y_RNA.121-201ENST00000363309 113 ntBASIC1.93□□□□□ -2.1
HPS3Q969F9 RNA5SP259-201ENST00000365541 109 ntBASIC1.93□□□□□ -2.1
HPS3Q969F9 CYCSP49-201ENST00000420810 319 ntBASIC1.93□□□□□ -2.1
HPS3Q969F9 AC008834.1-201ENST00000511612 175 ntBASIC1.93□□□□□ -2.1
HPS3Q969F9 AC107393.1-201ENST00000512403 346 ntBASIC1.93□□□□□ -2.1
HPS3Q969F9 RNU7-149P-201ENST00000516739 59 ntBASIC1.93□□□□□ -2.1
HPS3Q969F9 RNU6-794P-201ENST00000517261 64 ntBASIC1.93□□□□□ -2.1
HPS3Q969F9 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.93□□□□□ -2.1
HPS3Q969F9 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.93□□□□□ -2.1
HPS3Q969F9 MIR4498-201ENST00000577599 66 ntBASIC1.93□□□□□ -2.1
HPS3Q969F9 Pinc.1-201ENST00000616452 154 ntBASIC1.93□□□□□ -2.1
HPS3Q969F9 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC1.93□□□□□ -2.1
HPS3Q969F9 RNU6-199P-201ENST00000362954 107 ntBASIC1.92□□□□□ -2.1
HPS3Q969F9 RNU4-70P-201ENST00000384579 139 ntBASIC1.92□□□□□ -2.1
HPS3Q969F9 AL606845.1-201ENST00000404881 255 ntBASIC1.92□□□□□ -2.1
HPS3Q969F9 RN7SKP51-201ENST00000410781 304 ntBASIC1.92□□□□□ -2.1
HPS3Q969F9 RNU2-55P-201ENST00000411146 174 ntBASIC1.92□□□□□ -2.1
HPS3Q969F9 HSPE1P24-201ENST00000450782 238 ntBASIC1.92□□□□□ -2.1
HPS3Q969F9 RNU6-1053P-201ENST00000515930 101 ntBASIC1.92□□□□□ -2.1
HPS3Q969F9 MIR4744-201ENST00000581563 82 ntBASIC1.92□□□□□ -2.1
HPS3Q969F9 MIR8063-201ENST00000621930 81 ntBASIC1.92□□□□□ -2.1
HPS3Q969F9 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
HPS3Q969F9 SNORD33-201ENST00000362761 85 ntBASIC1.91□□□□□ -2.1
HPS3Q969F9 Y_RNA.274-201ENST00000364714 101 ntBASIC1.91□□□□□ -2.1
HPS3Q969F9 RNU6-1138P-201ENST00000365359 106 ntBASIC1.91□□□□□ -2.1
HPS3Q969F9 MIR452-201ENST00000385020 85 ntBASIC1.91□□□□□ -2.1
HPS3Q969F9 Y_RNA.793-201ENST00000411222 111 ntBASIC1.91□□□□□ -2.1
HPS3Q969F9 Y_RNA.644-201ENST00000459006 113 ntBASIC1.91□□□□□ -2.1
HPS3Q969F9 RNU6-138P-201ENST00000515952 107 ntBASIC1.91□□□□□ -2.1
HPS3Q969F9 SNORD77.4-201ENST00000516158 81 ntBASIC1.91□□□□□ -2.1
HPS3Q969F9 Y_RNA.674-201ENST00000516362 113 ntBASIC1.91□□□□□ -2.1
HPS3Q969F9 RNU6-453P-201ENST00000516819 85 ntBASIC1.91□□□□□ -2.1
HPS3Q969F9 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.1
HPS3Q969F9 Y_RNA.164-201ENST00000363709 102 ntBASIC1.9□□□□□ -2.11
HPS3Q969F9 RNU6-728P-201ENST00000365375 104 ntBASIC1.9□□□□□ -2.11
HPS3Q969F9 Y_RNA.571-201ENST00000384753 98 ntBASIC1.9□□□□□ -2.11
HPS3Q969F9 MT-TT-201ENST00000387460 66 ntBASIC1.9□□□□□ -2.11
HPS3Q969F9 SNORA26-201ENST00000391286 122 ntBASIC1.9□□□□□ -2.11
HPS3Q969F9 AC093850.1-201ENST00000454121 251 ntBASIC1.9□□□□□ -2.11
HPS3Q969F9 SCARNA8-201ENST00000515924 131 ntBASIC1.9□□□□□ -2.11
HPS3Q969F9 Y_RNA.797-201ENST00000515977 94 ntBASIC1.9□□□□□ -2.11
HPS3Q969F9 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.9□□□□□ -2.11
HPS3Q969F9 AC024614.2-201ENST00000577584 372 ntBASIC1.9□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 175.6 ms