Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 RNU6-842P-201ENST00000384269 107 ntBASIC-0.07□□□□□ -2.42
SYNE1Q8NF91 MIRLET7F2-201ENST00000385277 83 ntBASIC-0.07□□□□□ -2.42
SYNE1Q8NF91 Y_RNA.587-201ENST00000391210 103 ntBASIC-0.07□□□□□ -2.42
SYNE1Q8NF91 RNU6ATAC42P-201ENST00000408637 95 ntBASIC-0.07□□□□□ -2.42
SYNE1Q8NF91 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC-0.07□□□□□ -2.42
SYNE1Q8NF91 MTATP6P13-201ENST00000438531 667 ntBASIC-0.07□□□□□ -2.42
SYNE1Q8NF91 AL009048.1-201ENST00000450437 298 ntBASIC-0.07□□□□□ -2.42
SYNE1Q8NF91 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC-0.07□□□□□ -2.42
SYNE1Q8NF91 RNU6-320P-201ENST00000516511 106 ntBASIC-0.07□□□□□ -2.42
SYNE1Q8NF91 MTND1P24-201ENST00000552175 861 ntBASIC-0.07□□□□□ -2.42
SYNE1Q8NF91 Y_RNA.212-201ENST00000364177 102 ntBASIC-0.07□□□□□ -2.42
SYNE1Q8NF91 RNU6-767P-201ENST00000384132 107 ntBASIC-0.07□□□□□ -2.42
SYNE1Q8NF91 Y_RNA.530-201ENST00000384587 101 ntBASIC-0.07□□□□□ -2.42
SYNE1Q8NF91 RNU6-192P-201ENST00000391253 100 ntBASIC-0.07□□□□□ -2.42
SYNE1Q8NF91 SNORD111-201ENST00000408139 94 ntBASIC-0.07□□□□□ -2.42
SYNE1Q8NF91 AC133104.1-201ENST00000429100 218 ntBASIC-0.07□□□□□ -2.42
SYNE1Q8NF91 RNU7-66P-201ENST00000459469 62 ntBASIC-0.07□□□□□ -2.42
SYNE1Q8NF91 AC138749.4-201ENST00000563970 127 ntBASIC-0.07□□□□□ -2.42
SYNE1Q8NF91 AC023827.1-201ENST00000569247 97 ntBASIC-0.07□□□□□ -2.42
SYNE1Q8NF91 AC092747.3-201ENST00000603769 301 ntBASIC-0.07□□□□□ -2.42
SYNE1Q8NF91 AC010332.2-201ENST00000613083 1904 ntBASIC-0.07□□□□□ -2.42
SYNE1Q8NF91 Y_RNA.32-201ENST00000362589 110 ntBASIC-0.07□□□□□ -2.42
SYNE1Q8NF91 RNY3P3-201ENST00000363816 102 ntBASIC-0.07□□□□□ -2.42
SYNE1Q8NF91 RNU6-1335P-201ENST00000365426 107 ntBASIC-0.07□□□□□ -2.42
SYNE1Q8NF91 Y_RNA.359-201ENST00000365498 102 ntBASIC-0.07□□□□□ -2.42
SYNE1Q8NF91 Y_RNA.539-201ENST00000384635 107 ntBASIC-0.07□□□□□ -2.42
SYNE1Q8NF91 Y_RNA.616-201ENST00000410835 95 ntBASIC-0.07□□□□□ -2.42
SYNE1Q8NF91 Y_RNA.617-201ENST00000410920 90 ntBASIC-0.07□□□□□ -2.42
SYNE1Q8NF91 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC-0.07□□□□□ -2.42
SYNE1Q8NF91 ZNF736P8Y-201ENST00000451913 669 ntBASIC-0.07□□□□□ -2.42
SYNE1Q8NF91 SNORD123-201ENST00000459473 70 ntBASIC-0.07□□□□□ -2.42
SYNE1Q8NF91 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC-0.07□□□□□ -2.42
SYNE1Q8NF91 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC-0.07□□□□□ -2.42
SYNE1Q8NF91 RNU6-1007P-201ENST00000516586 107 ntBASIC-0.07□□□□□ -2.42
SYNE1Q8NF91 RN7SKP299-201ENST00000606679 301 ntBASIC-0.07□□□□□ -2.42
SYNE1Q8NF91 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC-0.07□□□□□ -2.42
SYNE1Q8NF91 Y_RNA.42-201ENST00000362660 108 ntBASIC-0.07□□□□□ -2.42
SYNE1Q8NF91 SNORD50.1-201ENST00000362987 71 ntBASIC-0.07□□□□□ -2.42
SYNE1Q8NF91 Y_RNA.179-201ENST00000363844 90 ntBASIC-0.07□□□□□ -2.42
SYNE1Q8NF91 RNY3P14-201ENST00000384309 102 ntBASIC-0.07□□□□□ -2.42
SYNE1Q8NF91 MIR122-201ENST00000385044 85 ntBASIC-0.07□□□□□ -2.42
SYNE1Q8NF91 Z82188.1-201ENST00000436709 154 ntBASIC-0.07□□□□□ -2.42
SYNE1Q8NF91 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC-0.07□□□□□ -2.42
SYNE1Q8NF91 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC-0.07□□□□□ -2.42
SYNE1Q8NF91 AC127455.1-201ENST00000565496 145 ntBASIC-0.07□□□□□ -2.42
SYNE1Q8NF91 NAMPTP3-201ENST00000569273 224 ntBASIC-0.07□□□□□ -2.42
SYNE1Q8NF91 5S_rRNA.13-201ENST00000622298 123 ntBASIC-0.07□□□□□ -2.42
SYNE1Q8NF91 RNU6-259P-201ENST00000383999 107 ntBASIC-0.07□□□□□ -2.42
SYNE1Q8NF91 MIR517A-201ENST00000385001 87 ntBASIC-0.07□□□□□ -2.42
SYNE1Q8NF91 MIR450B-201ENST00000401182 78 ntBASIC-0.07□□□□□ -2.42
SYNE1Q8NF91 AL512326.2-201ENST00000426359 151 ntBASIC-0.07□□□□□ -2.42
SYNE1Q8NF91 RNU7-141P-201ENST00000459304 62 ntBASIC-0.07□□□□□ -2.42
SYNE1Q8NF91 RNU6-180P-201ENST00000516697 61 ntBASIC-0.07□□□□□ -2.42
SYNE1Q8NF91 AL355375.2-201ENST00000574825 175 ntBASIC-0.07□□□□□ -2.42
SYNE1Q8NF91 AC133104.2-201ENST00000615272 193 ntBASIC-0.07□□□□□ -2.42
SYNE1Q8NF91 AF246928.1-201ENST00000623768 87 ntBASIC-0.07□□□□□ -2.42
SYNE1Q8NF91 RNU6-692P-201ENST00000384496 107 ntBASIC-0.08□□□□□ -2.42
SYNE1Q8NF91 RNU6-602P-201ENST00000411155 105 ntBASIC-0.08□□□□□ -2.42
SYNE1Q8NF91 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC-0.08□□□□□ -2.42
SYNE1Q8NF91 AC006380.1-201ENST00000603598 186 ntBASIC-0.08□□□□□ -2.42
SYNE1Q8NF91 5S_rRNA.15-201ENST00000611169 127 ntBASIC-0.08□□□□□ -2.42
SYNE1Q8NF91 Y_RNA.172-201ENST00000363765 102 ntBASIC-0.08□□□□□ -2.42
SYNE1Q8NF91 RNU6-961P-201ENST00000363893 105 ntBASIC-0.08□□□□□ -2.42
SYNE1Q8NF91 Y_RNA.242-201ENST00000364473 110 ntBASIC-0.08□□□□□ -2.42
SYNE1Q8NF91 SNORD50B-201ENST00000364995 70 ntBASIC-0.08□□□□□ -2.42
SYNE1Q8NF91 MIR145-201ENST00000384967 88 ntBASIC-0.08□□□□□ -2.42
SYNE1Q8NF91 PCNPP3-201ENST00000393579 471 ntBASIC-0.08□□□□□ -2.42
SYNE1Q8NF91 PIGPP3-201ENST00000425307 415 ntBASIC-0.08□□□□□ -2.42
SYNE1Q8NF91 AC005002.2-201ENST00000438228 269 ntBASIC-0.08□□□□□ -2.42
SYNE1Q8NF91 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC-0.08□□□□□ -2.42
SYNE1Q8NF91 AL080274.1-201ENST00000605565 220 ntBASIC-0.08□□□□□ -2.42
SYNE1Q8NF91 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC-0.08□□□□□ -2.42
SYNE1Q8NF91 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC-0.08□□□□□ -2.42
SYNE1Q8NF91 SNORD114-14-201ENST00000362723 75 ntBASIC-0.08□□□□□ -2.42
SYNE1Q8NF91 SNORA18.1-201ENST00000363418 128 ntBASIC-0.08□□□□□ -2.42
SYNE1Q8NF91 MIR3165-201ENST00000579874 75 ntBASIC-0.08□□□□□ -2.42
SYNE1Q8NF91 AL049861.1-201ENST00000603130 150 ntBASIC-0.08□□□□□ -2.42
SYNE1Q8NF91 RNU6-727P-201ENST00000363592 107 ntBASIC-0.08□□□□□ -2.42
SYNE1Q8NF91 RNU6-1214P-201ENST00000363650 109 ntBASIC-0.08□□□□□ -2.42
SYNE1Q8NF91 MIR643-201ENST00000385267 97 ntBASIC-0.08□□□□□ -2.42
SYNE1Q8NF91 RNU6-1068P-201ENST00000410958 103 ntBASIC-0.08□□□□□ -2.42
SYNE1Q8NF91 RNU6-1016P-201ENST00000516689 94 ntBASIC-0.08□□□□□ -2.42
SYNE1Q8NF91 AL356055.1-201ENST00000602528 446 ntBASIC-0.08□□□□□ -2.42
SYNE1Q8NF91 DISC2.1-201ENST00000612827 205 ntBASIC-0.08□□□□□ -2.42
SYNE1Q8NF91 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-0.08□□□□□ -2.42
SYNE1Q8NF91 MIR4788-201ENST00000639104 80 ntBASIC-0.08□□□□□ -2.42
SYNE1Q8NF91 AL596211.1-201ENST00000569873 2277 ntBASIC-0.08□□□□□ -2.42
SYNE1Q8NF91 RNU5B-2P-201ENST00000363036 113 ntBASIC-0.08□□□□□ -2.42
SYNE1Q8NF91 Y_RNA.230-201ENST00000364348 109 ntBASIC-0.08□□□□□ -2.42
SYNE1Q8NF91 RNU6-63P-201ENST00000516690 95 ntBASIC-0.08□□□□□ -2.42
SYNE1Q8NF91 AC073648.5-201ENST00000603502 305 ntBASIC-0.08□□□□□ -2.42
SYNE1Q8NF91 RN7SL660P-201ENST00000614852 299 ntBASIC-0.08□□□□□ -2.42
SYNE1Q8NF91 AL354751.2-201ENST00000415471 210 ntBASIC-0.08□□□□□ -2.42
SYNE1Q8NF91 MTCO2P19-201ENST00000427513 598 ntBASIC-0.08□□□□□ -2.42
SYNE1Q8NF91 RNU6-158P-201ENST00000517104 100 ntBASIC-0.08□□□□□ -2.42
SYNE1Q8NF91 AC022306.2-201ENST00000617563 647 ntBASIC-0.08□□□□□ -2.42
SYNE1Q8NF91 AL354950.2-201ENST00000617939 290 ntBASIC-0.08□□□□□ -2.42
SYNE1Q8NF91 Y_RNA.446-201ENST00000384178 104 ntBASIC-0.08□□□□□ -2.42
SYNE1Q8NF91 AL358934.1-201ENST00000432346 324 ntBASIC-0.08□□□□□ -2.42
SYNE1Q8NF91 AL138752.1-201ENST00000452964 351 ntBASIC-0.08□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 179.8 ms