Protein–RNA interactions for Protein: Q8NDV3

SMC1B, Structural maintenance of chromosomes protein 1B, humanhuman

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1BQ8NDV3 RNU6-312P-201ENST00000364629 107 ntBASIC2.34□□□□□ -2.03
SMC1BQ8NDV3 RNU6-728P-201ENST00000365375 104 ntBASIC2.34□□□□□ -2.03
SMC1BQ8NDV3 MT-TT-201ENST00000387460 66 ntBASIC2.34□□□□□ -2.03
SMC1BQ8NDV3 MLLT10P1-201ENST00000418346 262 ntBASIC2.34□□□□□ -2.03
SMC1BQ8NDV3 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC2.34□□□□□ -2.03
SMC1BQ8NDV3 STAG3L5P-204ENST00000443759 179 ntBASIC2.34□□□□□ -2.03
SMC1BQ8NDV3 RNA5SP57-201ENST00000459463 123 ntBASIC2.34□□□□□ -2.03
SMC1BQ8NDV3 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC2.34□□□□□ -2.03
SMC1BQ8NDV3 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC2.34□□□□□ -2.03
SMC1BQ8NDV3 AC087685.1-201ENST00000587507 141 ntBASIC2.34□□□□□ -2.03
SMC1BQ8NDV3 AL049861.1-201ENST00000603130 150 ntBASIC2.34□□□□□ -2.03
SMC1BQ8NDV3 AC108706.1-201ENST00000611053 297 ntBASIC2.34□□□□□ -2.03
SMC1BQ8NDV3 AL591926.4-201ENST00000616895 298 ntBASIC2.34□□□□□ -2.03
SMC1BQ8NDV3 AC008555.8-201ENST00000623602 2168 ntBASIC2.34□□□□□ -2.04
SMC1BQ8NDV3 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.33□□□□□ -2.04
SMC1BQ8NDV3 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
SMC1BQ8NDV3 Y_RNA.23-201ENST00000362496 106 ntBASIC2.33□□□□□ -2.04
SMC1BQ8NDV3 SNORD68-201ENST00000363214 84 ntBASIC2.33□□□□□ -2.04
SMC1BQ8NDV3 Y_RNA.180-201ENST00000363867 113 ntBASIC2.33□□□□□ -2.04
SMC1BQ8NDV3 Y_RNA.242-201ENST00000364473 110 ntBASIC2.33□□□□□ -2.04
SMC1BQ8NDV3 Y_RNA.412-201ENST00000384001 104 ntBASIC2.33□□□□□ -2.04
SMC1BQ8NDV3 RNU6-131P-201ENST00000391144 107 ntBASIC2.33□□□□□ -2.04
SMC1BQ8NDV3 AL034345.1-201ENST00000407768 123 ntBASIC2.33□□□□□ -2.04
SMC1BQ8NDV3 AL121914.1-201ENST00000450188 156 ntBASIC2.33□□□□□ -2.04
SMC1BQ8NDV3 SNORD11-201ENST00000459124 84 ntBASIC2.33□□□□□ -2.04
SMC1BQ8NDV3 AC109810.1-201ENST00000534066 224 ntBASIC2.33□□□□□ -2.04
SMC1BQ8NDV3 uc_338.4-201ENST00000616635 176 ntBASIC2.33□□□□□ -2.04
SMC1BQ8NDV3 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
SMC1BQ8NDV3 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
SMC1BQ8NDV3 RNU6-296P-201ENST00000384608 107 ntBASIC2.32□□□□□ -2.04
SMC1BQ8NDV3 SNORA79-201ENST00000408376 140 ntBASIC2.32□□□□□ -2.04
SMC1BQ8NDV3 AC004965.1-201ENST00000413033 213 ntBASIC2.32□□□□□ -2.04
SMC1BQ8NDV3 RNU6-126P-201ENST00000516685 103 ntBASIC2.32□□□□□ -2.04
SMC1BQ8NDV3 RNA5SP437-201ENST00000517249 129 ntBASIC2.32□□□□□ -2.04
SMC1BQ8NDV3 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC2.32□□□□□ -2.04
SMC1BQ8NDV3 ZNF702P-202ENST00000434269 1966 ntBASIC2.32□□□□□ -2.04
SMC1BQ8NDV3 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.32□□□□□ -2.04
SMC1BQ8NDV3 Y_RNA.357-201ENST00000365487 109 ntBASIC2.31□□□□□ -2.04
SMC1BQ8NDV3 RNA5SP212-201ENST00000391223 107 ntBASIC2.31□□□□□ -2.04
SMC1BQ8NDV3 RNA5SP100-201ENST00000410903 110 ntBASIC2.31□□□□□ -2.04
SMC1BQ8NDV3 RNA5SP59-201ENST00000410922 110 ntBASIC2.31□□□□□ -2.04
SMC1BQ8NDV3 RNU2-55P-201ENST00000411146 174 ntBASIC2.31□□□□□ -2.04
SMC1BQ8NDV3 AC003989.2-201ENST00000440224 169 ntBASIC2.31□□□□□ -2.04
SMC1BQ8NDV3 AC104435.1-201ENST00000483483 166 ntBASIC2.31□□□□□ -2.04
SMC1BQ8NDV3 RPS27P21-201ENST00000486977 252 ntBASIC2.31□□□□□ -2.04
SMC1BQ8NDV3 OR9P1P-201ENST00000496431 281 ntBASIC2.31□□□□□ -2.04
SMC1BQ8NDV3 SNORA31.10-201ENST00000516482 106 ntBASIC2.31□□□□□ -2.04
SMC1BQ8NDV3 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.31□□□□□ -2.04
SMC1BQ8NDV3 MIR4709-201ENST00000577272 72 ntBASIC2.31□□□□□ -2.04
SMC1BQ8NDV3 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.31□□□□□ -2.04
SMC1BQ8NDV3 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.31□□□□□ -2.04
SMC1BQ8NDV3 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.31□□□□□ -2.04
SMC1BQ8NDV3 AP000553.5-201ENST00000641933 54 ntBASIC2.31□□□□□ -2.04
SMC1BQ8NDV3 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.3□□□□□ -2.04
SMC1BQ8NDV3 RNA5SP276-201ENST00000362580 94 ntBASIC2.3□□□□□ -2.04
SMC1BQ8NDV3 MIR15B-201ENST00000385045 98 ntBASIC2.3□□□□□ -2.04
SMC1BQ8NDV3 MIR802-201ENST00000390235 94 ntBASIC2.3□□□□□ -2.04
SMC1BQ8NDV3 SNORA12.1-201ENST00000390873 148 ntBASIC2.3□□□□□ -2.04
SMC1BQ8NDV3 RN7SKP51-201ENST00000410781 304 ntBASIC2.3□□□□□ -2.04
SMC1BQ8NDV3 AL158823.1-201ENST00000418441 478 ntBASIC2.3□□□□□ -2.04
SMC1BQ8NDV3 HSPE1P9-201ENST00000440046 311 ntBASIC2.3□□□□□ -2.04
SMC1BQ8NDV3 snoU13.27-201ENST00000459278 104 ntBASIC2.3□□□□□ -2.04
SMC1BQ8NDV3 RNU7-34P-201ENST00000459394 64 ntBASIC2.3□□□□□ -2.04
SMC1BQ8NDV3 RNU6-250P-201ENST00000516958 103 ntBASIC2.3□□□□□ -2.04
SMC1BQ8NDV3 MIR4662B-201ENST00000579498 81 ntBASIC2.3□□□□□ -2.04
SMC1BQ8NDV3 U8.5-201ENST00000364528 136 ntBASIC2.29□□□□□ -2.04
SMC1BQ8NDV3 SNORA4.2-201ENST00000365313 147 ntBASIC2.29□□□□□ -2.04
SMC1BQ8NDV3 MIR522-201ENST00000385071 87 ntBASIC2.29□□□□□ -2.04
SMC1BQ8NDV3 PCNPP3-201ENST00000393579 471 ntBASIC2.29□□□□□ -2.04
SMC1BQ8NDV3 Y_RNA.622-201ENST00000411091 108 ntBASIC2.29□□□□□ -2.04
SMC1BQ8NDV3 FTH1P12-201ENST00000432137 551 ntBASIC2.29□□□□□ -2.04
SMC1BQ8NDV3 SNORD77.4-201ENST00000516158 81 ntBASIC2.29□□□□□ -2.04
SMC1BQ8NDV3 RNU6-1299P-201ENST00000516316 100 ntBASIC2.29□□□□□ -2.04
SMC1BQ8NDV3 MIR4287-201ENST00000579398 78 ntBASIC2.29□□□□□ -2.04
SMC1BQ8NDV3 MIR4762-201ENST00000585261 75 ntBASIC2.29□□□□□ -2.04
SMC1BQ8NDV3 MIR8081-201ENST00000611533 95 ntBASIC2.29□□□□□ -2.04
SMC1BQ8NDV3 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC2.29□□□□□ -2.04
SMC1BQ8NDV3 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.28□□□□□ -2.04
SMC1BQ8NDV3 Y_RNA.432-201ENST00000384087 111 ntBASIC2.28□□□□□ -2.04
SMC1BQ8NDV3 AC074198.2-201ENST00000508153 258 ntBASIC2.28□□□□□ -2.04
SMC1BQ8NDV3 RNU7-149P-201ENST00000516739 59 ntBASIC2.28□□□□□ -2.04
SMC1BQ8NDV3 MIR4431-201ENST00000579990 94 ntBASIC2.28□□□□□ -2.04
SMC1BQ8NDV3 MIR4448-201ENST00000584360 86 ntBASIC2.28□□□□□ -2.04
SMC1BQ8NDV3 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
SMC1BQ8NDV3 RNU6-1084P-201ENST00000362498 107 ntBASIC2.27□□□□□ -2.05
SMC1BQ8NDV3 snoU2-30.1-201ENST00000365012 70 ntBASIC2.27□□□□□ -2.05
SMC1BQ8NDV3 Y_RNA.464-201ENST00000384282 110 ntBASIC2.27□□□□□ -2.05
SMC1BQ8NDV3 RNU6-1031P-201ENST00000384773 107 ntBASIC2.27□□□□□ -2.05
SMC1BQ8NDV3 SNORA26-201ENST00000391286 122 ntBASIC2.27□□□□□ -2.05
SMC1BQ8NDV3 RPL30P13-201ENST00000418873 348 ntBASIC2.27□□□□□ -2.05
SMC1BQ8NDV3 SEPT7P4-201ENST00000437076 306 ntBASIC2.27□□□□□ -2.05
SMC1BQ8NDV3 NDUFA4P2-201ENST00000489989 244 ntBASIC2.27□□□□□ -2.05
SMC1BQ8NDV3 SNORA31.17-201ENST00000516953 127 ntBASIC2.27□□□□□ -2.05
SMC1BQ8NDV3 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.27□□□□□ -2.05
SMC1BQ8NDV3 Pinc.1-201ENST00000616452 154 ntBASIC2.27□□□□□ -2.05
SMC1BQ8NDV3 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
SMC1BQ8NDV3 SNORD45.3-201ENST00000363836 72 ntBASIC2.26□□□□□ -2.05
SMC1BQ8NDV3 SNORA16B-201ENST00000364674 135 ntBASIC2.26□□□□□ -2.05
SMC1BQ8NDV3 RNU6-1138P-201ENST00000365359 106 ntBASIC2.26□□□□□ -2.05
SMC1BQ8NDV3 Y_RNA.374-201ENST00000365606 101 ntBASIC2.26□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 117.8 ms