Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 Y_RNA.363-201ENST00000365529 113 ntBASIC0.87□□□□□ -2.27
CCDC71LQ8N9Z2 AC091959.1-201ENST00000495857 238 ntBASIC0.87□□□□□ -2.27
CCDC71LQ8N9Z2 SNORD111.1-201ENST00000516421 86 ntBASIC0.87□□□□□ -2.27
CCDC71LQ8N9Z2 SNORA18.7-201ENST00000516910 131 ntBASIC0.87□□□□□ -2.27
CCDC71LQ8N9Z2 AC090142.3-201ENST00000519012 385 ntBASIC0.87□□□□□ -2.27
CCDC71LQ8N9Z2 MIR2681-201ENST00000581814 105 ntBASIC0.87□□□□□ -2.27
CCDC71LQ8N9Z2 Y_RNA.84-201ENST00000363011 104 ntBASIC0.86□□□□□ -2.27
CCDC71LQ8N9Z2 Y_RNA.238-201ENST00000364441 102 ntBASIC0.86□□□□□ -2.27
CCDC71LQ8N9Z2 RNU6-1187P-201ENST00000364771 110 ntBASIC0.86□□□□□ -2.27
CCDC71LQ8N9Z2 RNU6-392P-201ENST00000364926 101 ntBASIC0.86□□□□□ -2.27
CCDC71LQ8N9Z2 Y_RNA.512-201ENST00000384518 102 ntBASIC0.86□□□□□ -2.27
CCDC71LQ8N9Z2 BTF3P11-201ENST00000426582 477 ntBASIC0.86□□□□□ -2.27
CCDC71LQ8N9Z2 AC245047.7-201ENST00000440265 293 ntBASIC0.86□□□□□ -2.27
CCDC71LQ8N9Z2 AL731563.1-201ENST00000442202 214 ntBASIC0.86□□□□□ -2.27
CCDC71LQ8N9Z2 HMGN2P32-201ENST00000444648 269 ntBASIC0.86□□□□□ -2.27
CCDC71LQ8N9Z2 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC0.86□□□□□ -2.27
CCDC71LQ8N9Z2 Y_RNA.637-201ENST00000459424 114 ntBASIC0.86□□□□□ -2.27
CCDC71LQ8N9Z2 MTATP8P1-201ENST00000467115 207 ntBASIC0.86□□□□□ -2.27
CCDC71LQ8N9Z2 NDUFA4P2-201ENST00000489989 244 ntBASIC0.86□□□□□ -2.27
CCDC71LQ8N9Z2 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC0.86□□□□□ -2.27
CCDC71LQ8N9Z2 SNORA31.4-201ENST00000516049 129 ntBASIC0.86□□□□□ -2.27
CCDC71LQ8N9Z2 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.86□□□□□ -2.27
CCDC71LQ8N9Z2 MIR4781-201ENST00000585250 76 ntBASIC0.86□□□□□ -2.27
CCDC71LQ8N9Z2 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.86□□□□□ -2.27
CCDC71LQ8N9Z2 AC007742.2-201ENST00000618226 398 ntBASIC0.86□□□□□ -2.27
CCDC71LQ8N9Z2 AL391516.1-201ENST00000554380 2449 ntBASIC0.86□□□□□ -2.27
CCDC71LQ8N9Z2 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.86□□□□□ -2.27
CCDC71LQ8N9Z2 RNU6-238P-201ENST00000363313 106 ntBASIC0.85□□□□□ -2.27
CCDC71LQ8N9Z2 Y_RNA.293-201ENST00000364908 93 ntBASIC0.85□□□□□ -2.27
CCDC71LQ8N9Z2 Y_RNA.327-201ENST00000365201 102 ntBASIC0.85□□□□□ -2.27
CCDC71LQ8N9Z2 RNU6-969P-201ENST00000383900 105 ntBASIC0.85□□□□□ -2.27
CCDC71LQ8N9Z2 Y_RNA.422-201ENST00000384054 114 ntBASIC0.85□□□□□ -2.27
CCDC71LQ8N9Z2 RNU6-383P-201ENST00000410864 94 ntBASIC0.85□□□□□ -2.27
CCDC71LQ8N9Z2 RNA5SP247-201ENST00000411181 105 ntBASIC0.85□□□□□ -2.27
CCDC71LQ8N9Z2 MTND4LP30-201ENST00000454092 297 ntBASIC0.85□□□□□ -2.27
CCDC71LQ8N9Z2 AC005840.1-201ENST00000498412 377 ntBASIC0.85□□□□□ -2.27
CCDC71LQ8N9Z2 RNU6-1338P-201ENST00000516328 91 ntBASIC0.85□□□□□ -2.27
CCDC71LQ8N9Z2 AC006504.6-201ENST00000590142 199 ntBASIC0.85□□□□□ -2.27
CCDC71LQ8N9Z2 AL096861.1-201ENST00000610899 123 ntBASIC0.85□□□□□ -2.27
CCDC71LQ8N9Z2 AC013791.1-201ENST00000616619 62 ntBASIC0.85□□□□□ -2.27
CCDC71LQ8N9Z2 AL353770.2-201ENST00000620024 78 ntBASIC0.85□□□□□ -2.27
CCDC71LQ8N9Z2 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC0.85□□□□□ -2.27
CCDC71LQ8N9Z2 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
CCDC71LQ8N9Z2 RNU6-1272P-201ENST00000362776 107 ntBASIC0.84□□□□□ -2.27
CCDC71LQ8N9Z2 Y_RNA.164-201ENST00000363709 102 ntBASIC0.84□□□□□ -2.27
CCDC71LQ8N9Z2 RNU6-674P-201ENST00000363831 107 ntBASIC0.84□□□□□ -2.27
CCDC71LQ8N9Z2 Y_RNA.326-201ENST00000365176 113 ntBASIC0.84□□□□□ -2.27
CCDC71LQ8N9Z2 RNU6-442P-201ENST00000383968 104 ntBASIC0.84□□□□□ -2.27
CCDC71LQ8N9Z2 MIR520C-201ENST00000385005 87 ntBASIC0.84□□□□□ -2.27
CCDC71LQ8N9Z2 RNU6-1109P-201ENST00000391187 107 ntBASIC0.84□□□□□ -2.27
CCDC71LQ8N9Z2 RNU6-1054P-201ENST00000411293 104 ntBASIC0.84□□□□□ -2.27
CCDC71LQ8N9Z2 RPS23P4-201ENST00000487908 423 ntBASIC0.84□□□□□ -2.27
CCDC71LQ8N9Z2 SNORA27.4-201ENST00000516650 95 ntBASIC0.84□□□□□ -2.27
CCDC71LQ8N9Z2 RNU6-635P-201ENST00000516651 102 ntBASIC0.84□□□□□ -2.27
CCDC71LQ8N9Z2 SNORA74.3-201ENST00000517108 154 ntBASIC0.84□□□□□ -2.27
CCDC71LQ8N9Z2 DEFB108E-201ENST00000524692 240 ntBASIC0.84□□□□□ -2.27
CCDC71LQ8N9Z2 MIR5692C2-201ENST00000577959 77 ntBASIC0.84□□□□□ -2.27
CCDC71LQ8N9Z2 MIR4661-201ENST00000582720 75 ntBASIC0.84□□□□□ -2.27
CCDC71LQ8N9Z2 MIR3192-201ENST00000584920 77 ntBASIC0.84□□□□□ -2.27
CCDC71LQ8N9Z2 SNORD114-21-201ENST00000606412 72 ntBASIC0.84□□□□□ -2.27
CCDC71LQ8N9Z2 MIR6078-201ENST00000611069 100 ntBASIC0.84□□□□□ -2.27
CCDC71LQ8N9Z2 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.84□□□□□ -2.28
CCDC71LQ8N9Z2 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC0.84□□□□□ -2.28
CCDC71LQ8N9Z2 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
CCDC71LQ8N9Z2 AC068700.1-201ENST00000565862 3754 ntBASIC0.83□□□□□ -2.28
CCDC71LQ8N9Z2 SNORA63-201ENST00000363450 132 ntBASIC0.83□□□□□ -2.28
CCDC71LQ8N9Z2 RNU1-124P-201ENST00000363861 145 ntBASIC0.83□□□□□ -2.28
CCDC71LQ8N9Z2 RNU6-144P-201ENST00000383951 107 ntBASIC0.83□□□□□ -2.28
CCDC71LQ8N9Z2 SNORD38C-201ENST00000384381 69 ntBASIC0.83□□□□□ -2.28
CCDC71LQ8N9Z2 RNU6-713P-201ENST00000384761 107 ntBASIC0.83□□□□□ -2.28
CCDC71LQ8N9Z2 SNORD72-201ENST00000390994 80 ntBASIC0.83□□□□□ -2.28
CCDC71LQ8N9Z2 RNU6-1203P-201ENST00000410703 110 ntBASIC0.83□□□□□ -2.28
CCDC71LQ8N9Z2 AC002429.1-201ENST00000437672 148 ntBASIC0.83□□□□□ -2.28
CCDC71LQ8N9Z2 snoU13.25-201ENST00000458945 104 ntBASIC0.83□□□□□ -2.28
CCDC71LQ8N9Z2 SNORD123-201ENST00000459473 70 ntBASIC0.83□□□□□ -2.28
CCDC71LQ8N9Z2 SNORD124-201ENST00000459577 104 ntBASIC0.83□□□□□ -2.28
CCDC71LQ8N9Z2 RPL39P28-201ENST00000465655 155 ntBASIC0.83□□□□□ -2.28
CCDC71LQ8N9Z2 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC0.83□□□□□ -2.28
CCDC71LQ8N9Z2 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC0.83□□□□□ -2.28
CCDC71LQ8N9Z2 SERF1AP1-201ENST00000514575 187 ntBASIC0.83□□□□□ -2.28
CCDC71LQ8N9Z2 RNU6-1007P-201ENST00000516586 107 ntBASIC0.83□□□□□ -2.28
CCDC71LQ8N9Z2 Y_RNA.720-201ENST00000517166 92 ntBASIC0.83□□□□□ -2.28
CCDC71LQ8N9Z2 AC087685.1-201ENST00000587507 141 ntBASIC0.83□□□□□ -2.28
CCDC71LQ8N9Z2 AL157834.3-201ENST00000615543 103 ntBASIC0.83□□□□□ -2.28
CCDC71LQ8N9Z2 snoU18.1-201ENST00000629629 71 ntBASIC0.83□□□□□ -2.28
CCDC71LQ8N9Z2 AC008163.1-202ENST00000636004 2889 ntBASIC0.83□□□□□ -2.28
CCDC71LQ8N9Z2 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.82□□□□□ -2.28
CCDC71LQ8N9Z2 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.82□□□□□ -2.28
CCDC71LQ8N9Z2 MIR367-201ENST00000362299 68 ntBASIC0.82□□□□□ -2.28
CCDC71LQ8N9Z2 RNU6-694P-201ENST00000364071 147 ntBASIC0.82□□□□□ -2.28
CCDC71LQ8N9Z2 RNU4-10P-201ENST00000364383 140 ntBASIC0.82□□□□□ -2.28
CCDC71LQ8N9Z2 SNORA25.9-201ENST00000365087 128 ntBASIC0.82□□□□□ -2.28
CCDC71LQ8N9Z2 MIR606-201ENST00000384851 96 ntBASIC0.82□□□□□ -2.28
CCDC71LQ8N9Z2 MIR499A-201ENST00000384903 122 ntBASIC0.82□□□□□ -2.28
CCDC71LQ8N9Z2 AC063976.4-201ENST00000421971 163 ntBASIC0.82□□□□□ -2.28
CCDC71LQ8N9Z2 AC023449.1-201ENST00000454464 154 ntBASIC0.82□□□□□ -2.28
CCDC71LQ8N9Z2 SNORD11-201ENST00000459124 84 ntBASIC0.82□□□□□ -2.28
CCDC71LQ8N9Z2 TRBVB-201ENST00000477100 408 ntBASIC0.82□□□□□ -2.28
CCDC71LQ8N9Z2 AC087343.1-201ENST00000477341 475 ntBASIC0.82□□□□□ -2.28
CCDC71LQ8N9Z2 RPS26P48-201ENST00000491713 339 ntBASIC0.82□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 178.5 ms