Protein–RNA interactions for Protein: Q8N3C7

CLIP4, CAP-Gly domain-containing linker protein 4, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4Q8N3C7 RNU6-112P-201ENST00000363599 104 ntBASIC1.69□□□□□ -2.14
CLIP4Q8N3C7 SNORA63D-201ENST00000364359 132 ntBASIC1.69□□□□□ -2.14
CLIP4Q8N3C7 Y_RNA.337-201ENST00000365312 102 ntBASIC1.69□□□□□ -2.14
CLIP4Q8N3C7 RNU6-484P-201ENST00000384016 107 ntBASIC1.69□□□□□ -2.14
CLIP4Q8N3C7 RNA5SP482-201ENST00000391269 118 ntBASIC1.69□□□□□ -2.14
CLIP4Q8N3C7 FTH1P12-201ENST00000432137 551 ntBASIC1.69□□□□□ -2.14
CLIP4Q8N3C7 AC003989.2-201ENST00000440224 169 ntBASIC1.69□□□□□ -2.14
CLIP4Q8N3C7 RNU6-346P-201ENST00000516288 111 ntBASIC1.69□□□□□ -2.14
CLIP4Q8N3C7 SNORA31.10-201ENST00000516482 106 ntBASIC1.69□□□□□ -2.14
CLIP4Q8N3C7 RNU7-28P-201ENST00000516759 62 ntBASIC1.69□□□□□ -2.14
CLIP4Q8N3C7 Y_RNA.703-201ENST00000516846 111 ntBASIC1.69□□□□□ -2.14
CLIP4Q8N3C7 DEFB122-202ENST00000569013 197 ntBASIC1.69□□□□□ -2.14
CLIP4Q8N3C7 MIR4299-201ENST00000577899 72 ntBASIC1.69□□□□□ -2.14
CLIP4Q8N3C7 AL773524.1-201ENST00000614065 229 ntBASIC1.69□□□□□ -2.14
CLIP4Q8N3C7 RNU6-1084P-201ENST00000362498 107 ntBASIC1.68□□□□□ -2.14
CLIP4Q8N3C7 RNU6-151P-201ENST00000364158 107 ntBASIC1.68□□□□□ -2.14
CLIP4Q8N3C7 RNU6-818P-201ENST00000364837 108 ntBASIC1.68□□□□□ -2.14
CLIP4Q8N3C7 SNORA4.2-201ENST00000365313 147 ntBASIC1.68□□□□□ -2.14
CLIP4Q8N3C7 RNU6-1138P-201ENST00000365359 106 ntBASIC1.68□□□□□ -2.14
CLIP4Q8N3C7 RNU6-187P-201ENST00000384139 106 ntBASIC1.68□□□□□ -2.14
CLIP4Q8N3C7 Y_RNA.521-201ENST00000384560 114 ntBASIC1.68□□□□□ -2.14
CLIP4Q8N3C7 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
CLIP4Q8N3C7 RN7SKP200-201ENST00000410564 320 ntBASIC1.68□□□□□ -2.14
CLIP4Q8N3C7 RNU2-70P-201ENST00000410718 179 ntBASIC1.68□□□□□ -2.14
CLIP4Q8N3C7 STAG3L5P-204ENST00000443759 179 ntBASIC1.68□□□□□ -2.14
CLIP4Q8N3C7 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.68□□□□□ -2.14
CLIP4Q8N3C7 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.68□□□□□ -2.14
CLIP4Q8N3C7 RNU6-197P-201ENST00000516680 100 ntBASIC1.68□□□□□ -2.14
CLIP4Q8N3C7 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.68□□□□□ -2.14
CLIP4Q8N3C7 AC022254.1-201ENST00000567857 235 ntBASIC1.68□□□□□ -2.14
CLIP4Q8N3C7 MIR4419B-201ENST00000577260 68 ntBASIC1.68□□□□□ -2.14
CLIP4Q8N3C7 MIR378D2-201ENST00000580636 98 ntBASIC1.68□□□□□ -2.14
CLIP4Q8N3C7 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC1.68□□□□□ -2.14
CLIP4Q8N3C7 MTND1P7-201ENST00000632801 297 ntBASIC1.68□□□□□ -2.14
CLIP4Q8N3C7 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
CLIP4Q8N3C7 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.67□□□□□ -2.14
CLIP4Q8N3C7 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
CLIP4Q8N3C7 Y_RNA.634-201ENST00000364811 113 ntBASIC1.67□□□□□ -2.14
CLIP4Q8N3C7 RNY1P5-201ENST00000383890 115 ntBASIC1.67□□□□□ -2.14
CLIP4Q8N3C7 Y_RNA.486-201ENST00000384398 107 ntBASIC1.67□□□□□ -2.14
CLIP4Q8N3C7 RNU6-296P-201ENST00000384608 107 ntBASIC1.67□□□□□ -2.14
CLIP4Q8N3C7 SNORD72-201ENST00000390994 80 ntBASIC1.67□□□□□ -2.14
CLIP4Q8N3C7 AC244636.1-201ENST00000421152 228 ntBASIC1.67□□□□□ -2.14
CLIP4Q8N3C7 HSPE1P9-201ENST00000440046 311 ntBASIC1.67□□□□□ -2.14
CLIP4Q8N3C7 RPS29P11-201ENST00000496507 171 ntBASIC1.67□□□□□ -2.14
CLIP4Q8N3C7 RPL23AP63-201ENST00000498752 471 ntBASIC1.67□□□□□ -2.14
CLIP4Q8N3C7 MRPS17P9-201ENST00000511924 393 ntBASIC1.67□□□□□ -2.14
CLIP4Q8N3C7 AC024614.2-201ENST00000577584 372 ntBASIC1.67□□□□□ -2.14
CLIP4Q8N3C7 MIR4662B-201ENST00000579498 81 ntBASIC1.67□□□□□ -2.14
CLIP4Q8N3C7 AC104984.5-201ENST00000586878 94 ntBASIC1.67□□□□□ -2.14
CLIP4Q8N3C7 DNAJC19P2-201ENST00000593340 302 ntBASIC1.67□□□□□ -2.14
CLIP4Q8N3C7 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.67□□□□□ -2.14
CLIP4Q8N3C7 SNORA28-201ENST00000606769 126 ntBASIC1.67□□□□□ -2.14
CLIP4Q8N3C7 AL627230.6-201ENST00000611129 280 ntBASIC1.67□□□□□ -2.14
CLIP4Q8N3C7 MIR6715A-201ENST00000615929 79 ntBASIC1.67□□□□□ -2.14
CLIP4Q8N3C7 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.67□□□□□ -2.14
CLIP4Q8N3C7 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
CLIP4Q8N3C7 ICE2P2-201ENST00000483823 2787 ntBASIC1.66□□□□□ -2.14
CLIP4Q8N3C7 AC092881.1-201ENST00000638218 2733 ntBASIC1.66□□□□□ -2.14
CLIP4Q8N3C7 Y_RNA.91-201ENST00000363042 107 ntBASIC1.66□□□□□ -2.14
CLIP4Q8N3C7 SNORD50B-201ENST00000364995 70 ntBASIC1.66□□□□□ -2.14
CLIP4Q8N3C7 RNU6-950P-201ENST00000384651 107 ntBASIC1.66□□□□□ -2.14
CLIP4Q8N3C7 AC019129.1-201ENST00000403786 261 ntBASIC1.66□□□□□ -2.14
CLIP4Q8N3C7 AL445685.2-201ENST00000422551 342 ntBASIC1.66□□□□□ -2.14
CLIP4Q8N3C7 RNA5SP153-201ENST00000516498 76 ntBASIC1.66□□□□□ -2.14
CLIP4Q8N3C7 SNORD116-25-201ENST00000516517 92 ntBASIC1.66□□□□□ -2.14
CLIP4Q8N3C7 RNA5SP437-201ENST00000517249 129 ntBASIC1.66□□□□□ -2.14
CLIP4Q8N3C7 AL160236.1-201ENST00000556317 195 ntBASIC1.66□□□□□ -2.14
CLIP4Q8N3C7 MIR4762-201ENST00000585261 75 ntBASIC1.66□□□□□ -2.14
CLIP4Q8N3C7 AC008507.4-201ENST00000585464 127 ntBASIC1.66□□□□□ -2.14
CLIP4Q8N3C7 Y_RNA.778-201ENST00000620203 90 ntBASIC1.66□□□□□ -2.14
CLIP4Q8N3C7 MIR3658-201ENST00000636291 56 ntBASIC1.66□□□□□ -2.14
CLIP4Q8N3C7 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
CLIP4Q8N3C7 U8.5-201ENST00000364528 136 ntBASIC1.65□□□□□ -2.15
CLIP4Q8N3C7 Y_RNA.400-201ENST00000383963 111 ntBASIC1.65□□□□□ -2.15
CLIP4Q8N3C7 RNU6-768P-201ENST00000384683 107 ntBASIC1.65□□□□□ -2.15
CLIP4Q8N3C7 SNORA26-201ENST00000391286 122 ntBASIC1.65□□□□□ -2.15
CLIP4Q8N3C7 AL034345.1-201ENST00000407768 123 ntBASIC1.65□□□□□ -2.15
CLIP4Q8N3C7 RNU4-61P-201ENST00000411243 107 ntBASIC1.65□□□□□ -2.15
CLIP4Q8N3C7 snoU13.26-201ENST00000459452 105 ntBASIC1.65□□□□□ -2.15
CLIP4Q8N3C7 RNA5SP57-201ENST00000459463 123 ntBASIC1.65□□□□□ -2.15
CLIP4Q8N3C7 RNU6-126P-201ENST00000516685 103 ntBASIC1.65□□□□□ -2.15
CLIP4Q8N3C7 SNORA31.17-201ENST00000516953 127 ntBASIC1.65□□□□□ -2.15
CLIP4Q8N3C7 RNU6-365P-201ENST00000517113 106 ntBASIC1.65□□□□□ -2.15
CLIP4Q8N3C7 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC1.65□□□□□ -2.15
CLIP4Q8N3C7 AC087685.1-201ENST00000587507 141 ntBASIC1.65□□□□□ -2.15
CLIP4Q8N3C7 Y_RNA.215-201ENST00000364204 112 ntBASIC1.64□□□□□ -2.15
CLIP4Q8N3C7 SNORD48-201ENST00000364953 64 ntBASIC1.64□□□□□ -2.15
CLIP4Q8N3C7 snoU2-30.1-201ENST00000365012 70 ntBASIC1.64□□□□□ -2.15
CLIP4Q8N3C7 MIR9-3-201ENST00000385084 90 ntBASIC1.64□□□□□ -2.15
CLIP4Q8N3C7 MIR802-201ENST00000390235 94 ntBASIC1.64□□□□□ -2.15
CLIP4Q8N3C7 SNORD37.2-201ENST00000391075 66 ntBASIC1.64□□□□□ -2.15
CLIP4Q8N3C7 RNA5SP212-201ENST00000391223 107 ntBASIC1.64□□□□□ -2.15
CLIP4Q8N3C7 SNORD45.4-201ENST00000516629 73 ntBASIC1.64□□□□□ -2.15
CLIP4Q8N3C7 RNU6-1116P-201ENST00000517269 99 ntBASIC1.64□□□□□ -2.15
CLIP4Q8N3C7 MIR3124-201ENST00000582636 67 ntBASIC1.64□□□□□ -2.15
CLIP4Q8N3C7 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.64□□□□□ -2.15
CLIP4Q8N3C7 MIR6844-201ENST00000637122 62 ntBASIC1.64□□□□□ -2.15
CLIP4Q8N3C7 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.64□□□□□ -2.15
CLIP4Q8N3C7 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 169.5 ms