Protein–RNA interactions for Protein: Q86UA6

RPAIN, RPA-interacting protein, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAINQ86UA6 Y_RNA.16-201ENST00000362421 102 ntBASIC1.23□□□□□ -2.21
RPAINQ86UA6 SNORA72.4-201ENST00000384174 132 ntBASIC1.23□□□□□ -2.21
RPAINQ86UA6 Y_RNA.459-201ENST00000384251 102 ntBASIC1.23□□□□□ -2.21
RPAINQ86UA6 RNU6-1105P-201ENST00000384774 107 ntBASIC1.23□□□□□ -2.21
RPAINQ86UA6 MIR660-201ENST00000385235 97 ntBASIC1.23□□□□□ -2.21
RPAINQ86UA6 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.23□□□□□ -2.21
RPAINQ86UA6 RNU2-14P-201ENST00000411053 191 ntBASIC1.23□□□□□ -2.21
RPAINQ86UA6 MTND4LP30-201ENST00000454092 297 ntBASIC1.23□□□□□ -2.21
RPAINQ86UA6 U8.19-201ENST00000459095 133 ntBASIC1.23□□□□□ -2.21
RPAINQ86UA6 RPS23P4-201ENST00000487908 423 ntBASIC1.23□□□□□ -2.21
RPAINQ86UA6 UBL5P1-201ENST00000507979 193 ntBASIC1.23□□□□□ -2.21
RPAINQ86UA6 RNU6-327P-201ENST00000516270 127 ntBASIC1.23□□□□□ -2.21
RPAINQ86UA6 RNU6-1338P-201ENST00000516328 91 ntBASIC1.23□□□□□ -2.21
RPAINQ86UA6 RNU6-570P-201ENST00000517051 105 ntBASIC1.23□□□□□ -2.21
RPAINQ86UA6 AL512310.8-201ENST00000550183 120 ntBASIC1.23□□□□□ -2.21
RPAINQ86UA6 AL512605.2-201ENST00000592972 256 ntBASIC1.23□□□□□ -2.21
RPAINQ86UA6 AC037487.3-201ENST00000606668 112 ntBASIC1.23□□□□□ -2.21
RPAINQ86UA6 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
RPAINQ86UA6 MIRLET7C-201ENST00000362160 84 ntBASIC1.22□□□□□ -2.21
RPAINQ86UA6 Y_RNA.162-201ENST00000363683 102 ntBASIC1.22□□□□□ -2.21
RPAINQ86UA6 RNU6-1048P-201ENST00000364054 107 ntBASIC1.22□□□□□ -2.21
RPAINQ86UA6 RNA5SP259-201ENST00000365541 109 ntBASIC1.22□□□□□ -2.21
RPAINQ86UA6 Y_RNA.374-201ENST00000365606 101 ntBASIC1.22□□□□□ -2.21
RPAINQ86UA6 Y_RNA.376-201ENST00000365638 108 ntBASIC1.22□□□□□ -2.21
RPAINQ86UA6 RNU6-713P-201ENST00000384761 107 ntBASIC1.22□□□□□ -2.21
RPAINQ86UA6 SNORA26.5-201ENST00000391215 123 ntBASIC1.22□□□□□ -2.21
RPAINQ86UA6 RNU6-1203P-201ENST00000410703 110 ntBASIC1.22□□□□□ -2.21
RPAINQ86UA6 RNU7-141P-201ENST00000459304 62 ntBASIC1.22□□□□□ -2.21
RPAINQ86UA6 RNU7-12P-201ENST00000516030 62 ntBASIC1.22□□□□□ -2.21
RPAINQ86UA6 AL117187.1-201ENST00000555482 181 ntBASIC1.22□□□□□ -2.21
RPAINQ86UA6 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC1.22□□□□□ -2.21
RPAINQ86UA6 AL591926.4-201ENST00000616895 298 ntBASIC1.22□□□□□ -2.21
RPAINQ86UA6 MIR548AY-201ENST00000617669 107 ntBASIC1.22□□□□□ -2.21
RPAINQ86UA6 AL391516.1-201ENST00000554380 2449 ntBASIC1.22□□□□□ -2.21
RPAINQ86UA6 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
RPAINQ86UA6 SNORA25.1-201ENST00000362326 128 ntBASIC1.21□□□□□ -2.22
RPAINQ86UA6 SNORD68-201ENST00000363214 84 ntBASIC1.21□□□□□ -2.22
RPAINQ86UA6 Y_RNA.176-201ENST00000363815 109 ntBASIC1.21□□□□□ -2.22
RPAINQ86UA6 Y_RNA.253-201ENST00000364562 112 ntBASIC1.21□□□□□ -2.22
RPAINQ86UA6 Y_RNA.574-201ENST00000384766 95 ntBASIC1.21□□□□□ -2.22
RPAINQ86UA6 AL591704.2-201ENST00000421658 181 ntBASIC1.21□□□□□ -2.22
RPAINQ86UA6 MTND2P23-201ENST00000422990 651 ntBASIC1.21□□□□□ -2.22
RPAINQ86UA6 AL358176.2-201ENST00000425769 204 ntBASIC1.21□□□□□ -2.22
RPAINQ86UA6 TRBVB-201ENST00000477100 408 ntBASIC1.21□□□□□ -2.22
RPAINQ86UA6 RPL23AP54-201ENST00000495129 419 ntBASIC1.21□□□□□ -2.22
RPAINQ86UA6 SERF1AP1-201ENST00000514575 187 ntBASIC1.21□□□□□ -2.22
RPAINQ86UA6 SNORA27.4-201ENST00000516650 95 ntBASIC1.21□□□□□ -2.22
RPAINQ86UA6 AC127455.1-201ENST00000565496 145 ntBASIC1.21□□□□□ -2.22
RPAINQ86UA6 MIR4762-201ENST00000585261 75 ntBASIC1.21□□□□□ -2.22
RPAINQ86UA6 AL353621.2-201ENST00000605340 133 ntBASIC1.21□□□□□ -2.22
RPAINQ86UA6 MIR8062-201ENST00000621515 85 ntBASIC1.21□□□□□ -2.22
RPAINQ86UA6 AC134026.1-201ENST00000623249 2239 ntBASIC1.21□□□□□ -2.22
RPAINQ86UA6 RNU1-124P-201ENST00000363861 145 ntBASIC1.2□□□□□ -2.22
RPAINQ86UA6 Y_RNA.203-201ENST00000364106 102 ntBASIC1.2□□□□□ -2.22
RPAINQ86UA6 RNU6-514P-201ENST00000384208 107 ntBASIC1.2□□□□□ -2.22
RPAINQ86UA6 RNU6-763P-201ENST00000390865 106 ntBASIC1.2□□□□□ -2.22
RPAINQ86UA6 MTCO2P33-201ENST00000402100 465 ntBASIC1.2□□□□□ -2.22
RPAINQ86UA6 SNORA36B-201ENST00000410438 131 ntBASIC1.2□□□□□ -2.22
RPAINQ86UA6 POLR2J4-204ENST00000418424 324 ntBASIC1.2□□□□□ -2.22
RPAINQ86UA6 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.2□□□□□ -2.22
RPAINQ86UA6 AC093850.1-201ENST00000454121 251 ntBASIC1.2□□□□□ -2.22
RPAINQ86UA6 Y_RNA.637-201ENST00000459424 114 ntBASIC1.2□□□□□ -2.22
RPAINQ86UA6 AC091959.1-201ENST00000495857 238 ntBASIC1.2□□□□□ -2.22
RPAINQ86UA6 SCARNA24.2-201ENST00000516968 130 ntBASIC1.2□□□□□ -2.22
RPAINQ86UA6 RNU6-1116P-201ENST00000517269 99 ntBASIC1.2□□□□□ -2.22
RPAINQ86UA6 DEFB108E-201ENST00000524692 240 ntBASIC1.2□□□□□ -2.22
RPAINQ86UA6 MIR4778-201ENST00000577635 80 ntBASIC1.2□□□□□ -2.22
RPAINQ86UA6 AP001282.2-201ENST00000616149 309 ntBASIC1.2□□□□□ -2.22
RPAINQ86UA6 AC099654.10-201ENST00000640395 161 ntBASIC1.2□□□□□ -2.22
RPAINQ86UA6 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
RPAINQ86UA6 Y_RNA.47-201ENST00000362697 108 ntBASIC1.19□□□□□ -2.22
RPAINQ86UA6 RNU6-899P-201ENST00000363947 107 ntBASIC1.19□□□□□ -2.22
RPAINQ86UA6 U8.5-201ENST00000364528 136 ntBASIC1.19□□□□□ -2.22
RPAINQ86UA6 RNU6-662P-201ENST00000384253 104 ntBASIC1.19□□□□□ -2.22
RPAINQ86UA6 RNU6-163P-201ENST00000384396 106 ntBASIC1.19□□□□□ -2.22
RPAINQ86UA6 MIR522-201ENST00000385071 87 ntBASIC1.19□□□□□ -2.22
RPAINQ86UA6 MIR1302-6-201ENST00000408466 90 ntBASIC1.19□□□□□ -2.22
RPAINQ86UA6 MLLT10P1-201ENST00000418346 262 ntBASIC1.19□□□□□ -2.22
RPAINQ86UA6 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.19□□□□□ -2.22
RPAINQ86UA6 SNORD116-28-201ENST00000516123 91 ntBASIC1.19□□□□□ -2.22
RPAINQ86UA6 RNU6-1045P-201ENST00000516321 107 ntBASIC1.19□□□□□ -2.22
RPAINQ86UA6 RN7SKP88-201ENST00000516847 250 ntBASIC1.19□□□□□ -2.22
RPAINQ86UA6 MIR5000-201ENST00000577717 103 ntBASIC1.19□□□□□ -2.22
RPAINQ86UA6 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.19□□□□□ -2.22
RPAINQ86UA6 RN7SL793P-201ENST00000583259 296 ntBASIC1.19□□□□□ -2.22
RPAINQ86UA6 AL365434.2-201ENST00000607979 234 ntBASIC1.19□□□□□ -2.22
RPAINQ86UA6 7SK.8-201ENST00000612110 250 ntBASIC1.19□□□□□ -2.22
RPAINQ86UA6 7SK.11-201ENST00000615477 250 ntBASIC1.19□□□□□ -2.22
RPAINQ86UA6 7SK.13-201ENST00000622040 250 ntBASIC1.19□□□□□ -2.22
RPAINQ86UA6 AC106754.2-201ENST00000623006 233 ntBASIC1.19□□□□□ -2.22
RPAINQ86UA6 AC027279.3-201ENST00000625055 122 ntBASIC1.19□□□□□ -2.22
RPAINQ86UA6 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.19□□□□□ -2.22
RPAINQ86UA6 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
RPAINQ86UA6 UBE2WP1-201ENST00000362030 340 ntBASIC1.18□□□□□ -2.22
RPAINQ86UA6 RNU6-199P-201ENST00000362954 107 ntBASIC1.18□□□□□ -2.22
RPAINQ86UA6 RNU6-833P-201ENST00000363486 107 ntBASIC1.18□□□□□ -2.22
RPAINQ86UA6 Y_RNA.217-201ENST00000364214 105 ntBASIC1.18□□□□□ -2.22
RPAINQ86UA6 Y_RNA.237-201ENST00000364439 102 ntBASIC1.18□□□□□ -2.22
RPAINQ86UA6 MT-TW-201ENST00000387382 68 ntBASIC1.18□□□□□ -2.22
RPAINQ86UA6 SNRPGP10-201ENST00000432323 225 ntBASIC1.18□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 179.4 ms