Protein–RNA interactions for Protein: Q6TFL3

CCDC171, Coiled-coil domain-containing protein 171, humanhuman

Predictions only

Length 1,326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171Q6TFL3 AP001506.1-201ENST00000615444 211 ntBASIC-1.05□□□□□ -2.58
CCDC171Q6TFL3 AC073534.2-201ENST00000620377 381 ntBASIC-1.05□□□□□ -2.58
CCDC171Q6TFL3 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC-1.05□□□□□ -2.58
CCDC171Q6TFL3 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC-1.05□□□□□ -2.58
CCDC171Q6TFL3 MIR409-201ENST00000362237 79 ntBASIC-1.06□□□□□ -2.58
CCDC171Q6TFL3 U8.6-201ENST00000364939 135 ntBASIC-1.06□□□□□ -2.58
CCDC171Q6TFL3 RNU6-996P-201ENST00000365438 107 ntBASIC-1.06□□□□□ -2.58
CCDC171Q6TFL3 RNU6-708P-201ENST00000384217 107 ntBASIC-1.06□□□□□ -2.58
CCDC171Q6TFL3 RNU6-906P-201ENST00000384700 70 ntBASIC-1.06□□□□□ -2.58
CCDC171Q6TFL3 MTCO2P8-201ENST00000412213 658 ntBASIC-1.06□□□□□ -2.58
CCDC171Q6TFL3 MTND3P23-201ENST00000431980 347 ntBASIC-1.06□□□□□ -2.58
CCDC171Q6TFL3 AL033528.1-201ENST00000453780 140 ntBASIC-1.06□□□□□ -2.58
CCDC171Q6TFL3 PCMTD1P1-201ENST00000455560 355 ntBASIC-1.06□□□□□ -2.58
CCDC171Q6TFL3 snoU109.3-201ENST00000459477 145 ntBASIC-1.06□□□□□ -2.58
CCDC171Q6TFL3 RNU6-1012P-201ENST00000516606 109 ntBASIC-1.06□□□□□ -2.58
CCDC171Q6TFL3 RNU6-765P-201ENST00000516916 99 ntBASIC-1.06□□□□□ -2.58
CCDC171Q6TFL3 MIR5696-201ENST00000578474 85 ntBASIC-1.06□□□□□ -2.58
CCDC171Q6TFL3 AC006441.5-201ENST00000612680 209 ntBASIC-1.06□□□□□ -2.58
CCDC171Q6TFL3 Y_RNA.49-201ENST00000362714 112 ntBASIC-1.07□□□□□ -2.58
CCDC171Q6TFL3 Y_RNA.125-201ENST00000363371 111 ntBASIC-1.07□□□□□ -2.58
CCDC171Q6TFL3 Y_RNA.450-201ENST00000384198 113 ntBASIC-1.07□□□□□ -2.58
CCDC171Q6TFL3 SNORA40.3-201ENST00000390964 122 ntBASIC-1.07□□□□□ -2.58
CCDC171Q6TFL3 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC-1.07□□□□□ -2.58
CCDC171Q6TFL3 CYCSP46-201ENST00000423569 204 ntBASIC-1.07□□□□□ -2.58
CCDC171Q6TFL3 SNORA19.2-201ENST00000516013 114 ntBASIC-1.07□□□□□ -2.58
CCDC171Q6TFL3 Y_RNA.697-201ENST00000516776 113 ntBASIC-1.07□□□□□ -2.58
CCDC171Q6TFL3 AC011458.1-201ENST00000604034 617 ntBASIC-1.07□□□□□ -2.58
CCDC171Q6TFL3 AL391262.2-201ENST00000622466 494 ntBASIC-1.07□□□□□ -2.58
CCDC171Q6TFL3 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC-1.07□□□□□ -2.58
CCDC171Q6TFL3 SNORD115-30-201ENST00000364117 82 ntBASIC-1.08□□□□□ -2.58
CCDC171Q6TFL3 Y_RNA.378-201ENST00000365652 113 ntBASIC-1.08□□□□□ -2.58
CCDC171Q6TFL3 SNORA1-201ENST00000384107 130 ntBASIC-1.08□□□□□ -2.58
CCDC171Q6TFL3 Y_RNA.539-201ENST00000384635 107 ntBASIC-1.08□□□□□ -2.58
CCDC171Q6TFL3 Y_RNA.588-201ENST00000391254 102 ntBASIC-1.08□□□□□ -2.58
CCDC171Q6TFL3 USP9YP16-201ENST00000430287 407 ntBASIC-1.08□□□□□ -2.58
CCDC171Q6TFL3 USP9YP23-201ENST00000455085 407 ntBASIC-1.08□□□□□ -2.58
CCDC171Q6TFL3 RNU2-11P-201ENST00000459191 187 ntBASIC-1.08□□□□□ -2.58
CCDC171Q6TFL3 RNU6-625P-201ENST00000459412 107 ntBASIC-1.08□□□□□ -2.58
CCDC171Q6TFL3 RNA5SP169-201ENST00000517268 117 ntBASIC-1.08□□□□□ -2.58
CCDC171Q6TFL3 MIR4491-201ENST00000581087 68 ntBASIC-1.08□□□□□ -2.58
CCDC171Q6TFL3 AC109347.2-201ENST00000610220 349 ntBASIC-1.08□□□□□ -2.58
CCDC171Q6TFL3 SNORD113-6-201ENST00000363345 75 ntBASIC-1.09□□□□□ -2.58
CCDC171Q6TFL3 SNORA69-201ENST00000383895 132 ntBASIC-1.09□□□□□ -2.58
CCDC171Q6TFL3 RNU6-1162P-201ENST00000384443 104 ntBASIC-1.09□□□□□ -2.58
CCDC171Q6TFL3 RNU6ATAC42P-201ENST00000408637 95 ntBASIC-1.09□□□□□ -2.58
CCDC171Q6TFL3 MTATP6P23-201ENST00000440153 476 ntBASIC-1.09□□□□□ -2.58
CCDC171Q6TFL3 RPL39P25-201ENST00000449384 154 ntBASIC-1.09□□□□□ -2.58
CCDC171Q6TFL3 RNA5SP66-201ENST00000517178 101 ntBASIC-1.09□□□□□ -2.58
CCDC171Q6TFL3 ELOCP32-201ENST00000548625 324 ntBASIC-1.09□□□□□ -2.58
CCDC171Q6TFL3 AL118558.2-201ENST00000556294 238 ntBASIC-1.09□□□□□ -2.58
CCDC171Q6TFL3 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC-1.09□□□□□ -2.58
CCDC171Q6TFL3 MIR4509-3-201ENST00000578671 94 ntBASIC-1.09□□□□□ -2.58
CCDC171Q6TFL3 MIR4509-2-201ENST00000583920 94 ntBASIC-1.09□□□□□ -2.58
CCDC171Q6TFL3 AL391834.2-201ENST00000609982 546 ntBASIC-1.09□□□□□ -2.58
CCDC171Q6TFL3 AL354950.2-201ENST00000617939 290 ntBASIC-1.09□□□□□ -2.58
CCDC171Q6TFL3 MIR4509-1-201ENST00000618224 94 ntBASIC-1.09□□□□□ -2.58
CCDC171Q6TFL3 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC-1.1□□□□□ -2.59
CCDC171Q6TFL3 RNY1P16-201ENST00000363063 111 ntBASIC-1.1□□□□□ -2.59
CCDC171Q6TFL3 RNA5SP245-201ENST00000364239 121 ntBASIC-1.1□□□□□ -2.59
CCDC171Q6TFL3 MIR516B1-201ENST00000385211 90 ntBASIC-1.1□□□□□ -2.59
CCDC171Q6TFL3 MIR196A1-201ENST00000388006 70 ntBASIC-1.1□□□□□ -2.59
CCDC171Q6TFL3 U8.15-201ENST00000390947 134 ntBASIC-1.1□□□□□ -2.59
CCDC171Q6TFL3 EIF1P2-201ENST00000428233 350 ntBASIC-1.1□□□□□ -2.59
CCDC171Q6TFL3 RNU7-63P-201ENST00000459054 62 ntBASIC-1.1□□□□□ -2.59
CCDC171Q6TFL3 AC131281.1-201ENST00000522984 164 ntBASIC-1.1□□□□□ -2.59
CCDC171Q6TFL3 AC008507.4-201ENST00000585464 127 ntBASIC-1.1□□□□□ -2.59
CCDC171Q6TFL3 RNU6-490P-201ENST00000362985 107 ntBASIC-1.11□□□□□ -2.59
CCDC171Q6TFL3 Y_RNA.106-201ENST00000363189 100 ntBASIC-1.11□□□□□ -2.59
CCDC171Q6TFL3 Y_RNA.241-201ENST00000364470 117 ntBASIC-1.11□□□□□ -2.59
CCDC171Q6TFL3 Y_RNA.371-201ENST00000365591 113 ntBASIC-1.11□□□□□ -2.59
CCDC171Q6TFL3 RNU6-1310P-201ENST00000384153 107 ntBASIC-1.11□□□□□ -2.59
CCDC171Q6TFL3 USMG5P1-201ENST00000425964 177 ntBASIC-1.11□□□□□ -2.59
CCDC171Q6TFL3 CEP57L1P1-201ENST00000430943 1201 ntBASIC-1.11□□□□□ -2.59
CCDC171Q6TFL3 AC108059.2-201ENST00000434626 151 ntBASIC-1.11□□□□□ -2.59
CCDC171Q6TFL3 SNORA18.6-201ENST00000516792 115 ntBASIC-1.11□□□□□ -2.59
CCDC171Q6TFL3 AP003168.1-201ENST00000530091 307 ntBASIC-1.11□□□□□ -2.59
CCDC171Q6TFL3 JPX_2.1-201ENST00000614161 69 ntBASIC-1.11□□□□□ -2.59
CCDC171Q6TFL3 AC005609.4-201ENST00000625071 447 ntBASIC-1.11□□□□□ -2.59
CCDC171Q6TFL3 RNU6-1209P-201ENST00000363655 107 ntBASIC-1.12□□□□□ -2.59
CCDC171Q6TFL3 Y_RNA.203-201ENST00000364106 102 ntBASIC-1.12□□□□□ -2.59
CCDC171Q6TFL3 Y_RNA.246-201ENST00000364495 108 ntBASIC-1.12□□□□□ -2.59
CCDC171Q6TFL3 RNU4-75P-201ENST00000364621 146 ntBASIC-1.12□□□□□ -2.59
CCDC171Q6TFL3 RNU6-1144P-201ENST00000384247 104 ntBASIC-1.12□□□□□ -2.59
CCDC171Q6TFL3 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC-1.12□□□□□ -2.59
CCDC171Q6TFL3 ACA59.1-201ENST00000515966 143 ntBASIC-1.12□□□□□ -2.59
CCDC171Q6TFL3 SCARNA20.2-201ENST00000516052 116 ntBASIC-1.12□□□□□ -2.59
CCDC171Q6TFL3 AC024405.2-202ENST00000532731 184 ntBASIC-1.12□□□□□ -2.59
CCDC171Q6TFL3 AC073869.9-201ENST00000641610 120 ntBASIC-1.12□□□□□ -2.59
CCDC171Q6TFL3 SNORD115-34-201ENST00000362441 82 ntBASIC-1.13□□□□□ -2.59
CCDC171Q6TFL3 SNORD115-12-201ENST00000362583 82 ntBASIC-1.13□□□□□ -2.59
CCDC171Q6TFL3 SNORD115-29-201ENST00000362834 82 ntBASIC-1.13□□□□□ -2.59
CCDC171Q6TFL3 SNORD115-9-201ENST00000362912 82 ntBASIC-1.13□□□□□ -2.59
CCDC171Q6TFL3 SNORD115-21-201ENST00000362963 81 ntBASIC-1.13□□□□□ -2.59
CCDC171Q6TFL3 SNORD115-14-201ENST00000363090 81 ntBASIC-1.13□□□□□ -2.59
CCDC171Q6TFL3 SNORD115-13-201ENST00000363358 82 ntBASIC-1.13□□□□□ -2.59
CCDC171Q6TFL3 SNORD115-41-201ENST00000363608 82 ntBASIC-1.13□□□□□ -2.59
CCDC171Q6TFL3 SNORD115-11-201ENST00000363616 82 ntBASIC-1.13□□□□□ -2.59
CCDC171Q6TFL3 SNORD115-5-201ENST00000363633 82 ntBASIC-1.13□□□□□ -2.59
CCDC171Q6TFL3 SNORD115-39-201ENST00000363694 82 ntBASIC-1.13□□□□□ -2.59
CCDC171Q6TFL3 SNORD115-4-201ENST00000363810 82 ntBASIC-1.13□□□□□ -2.59
Retrieved 100 of 98,524 protein–RNA pairs in 178.9 ms