Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 Y_RNA.676-201ENST00000516393 96 ntBASIC0.63□□□□□ -2.31
RFX4Q33E94 AC109810.1-201ENST00000534066 224 ntBASIC0.63□□□□□ -2.31
RFX4Q33E94 MIR4300-201ENST00000581016 96 ntBASIC0.63□□□□□ -2.31
RFX4Q33E94 AC008507.4-201ENST00000585464 127 ntBASIC0.63□□□□□ -2.31
RFX4Q33E94 AC005357.1-201ENST00000588399 301 ntBASIC0.63□□□□□ -2.31
RFX4Q33E94 JPX_2.1-201ENST00000614161 69 ntBASIC0.63□□□□□ -2.31
RFX4Q33E94 AC007742.2-201ENST00000618226 398 ntBASIC0.63□□□□□ -2.31
RFX4Q33E94 AC008133.2-201ENST00000624540 351 ntBASIC0.63□□□□□ -2.31
RFX4Q33E94 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.62□□□□□ -2.31
RFX4Q33E94 AC068700.1-201ENST00000565862 3754 ntBASIC0.62□□□□□ -2.31
RFX4Q33E94 RNU6-268P-201ENST00000364174 107 ntBASIC0.62□□□□□ -2.31
RFX4Q33E94 Y_RNA.222-201ENST00000364264 102 ntBASIC0.62□□□□□ -2.31
RFX4Q33E94 RNU6-654P-201ENST00000364373 107 ntBASIC0.62□□□□□ -2.31
RFX4Q33E94 SNORD114-22-201ENST00000365423 72 ntBASIC0.62□□□□□ -2.31
RFX4Q33E94 Y_RNA.526-201ENST00000384572 110 ntBASIC0.62□□□□□ -2.31
RFX4Q33E94 HSPE1P25-201ENST00000455484 251 ntBASIC0.62□□□□□ -2.31
RFX4Q33E94 SNORD11-201ENST00000459124 84 ntBASIC0.62□□□□□ -2.31
RFX4Q33E94 RNU6-437P-201ENST00000459408 95 ntBASIC0.62□□□□□ -2.31
RFX4Q33E94 RNU6-397P-201ENST00000516226 104 ntBASIC0.62□□□□□ -2.31
RFX4Q33E94 RNU6-191P-201ENST00000516295 94 ntBASIC0.62□□□□□ -2.31
RFX4Q33E94 Y_RNA.713-201ENST00000517013 96 ntBASIC0.62□□□□□ -2.31
RFX4Q33E94 MIR4452-201ENST00000583004 71 ntBASIC0.62□□□□□ -2.31
RFX4Q33E94 AC087685.1-201ENST00000587507 141 ntBASIC0.62□□□□□ -2.31
RFX4Q33E94 SNORD113-5-201ENST00000607261 78 ntBASIC0.62□□□□□ -2.31
RFX4Q33E94 RNU6-94P-201ENST00000607728 107 ntBASIC0.62□□□□□ -2.31
RFX4Q33E94 RNU6-674P-201ENST00000363831 107 ntBASIC0.61□□□□□ -2.31
RFX4Q33E94 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.61□□□□□ -2.31
RFX4Q33E94 PMCHL1-202ENST00000423102 261 ntBASIC0.61□□□□□ -2.31
RFX4Q33E94 Y_RNA.639-201ENST00000458981 102 ntBASIC0.61□□□□□ -2.31
RFX4Q33E94 SEPT14P8-201ENST00000508026 178 ntBASIC0.61□□□□□ -2.31
RFX4Q33E94 RNU6-830P-201ENST00000516353 107 ntBASIC0.61□□□□□ -2.31
RFX4Q33E94 AC036111.3-201ENST00000526389 112 ntBASIC0.61□□□□□ -2.31
RFX4Q33E94 RPL23AP91-201ENST00000569211 455 ntBASIC0.61□□□□□ -2.31
RFX4Q33E94 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC0.61□□□□□ -2.31
RFX4Q33E94 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.61□□□□□ -2.31
RFX4Q33E94 RAC1P9-201ENST00000604990 392 ntBASIC0.61□□□□□ -2.31
RFX4Q33E94 MIR6835-201ENST00000621552 64 ntBASIC0.61□□□□□ -2.31
RFX4Q33E94 MIR6516-201ENST00000630554 81 ntBASIC0.61□□□□□ -2.31
RFX4Q33E94 MIR4251-201ENST00000635819 61 ntBASIC0.61□□□□□ -2.31
RFX4Q33E94 AC023934.1-201ENST00000574529 2389 ntBASIC0.61□□□□□ -2.31
RFX4Q33E94 Y_RNA.105-201ENST00000363182 111 ntBASIC0.6□□□□□ -2.31
RFX4Q33E94 SNORD113-8-201ENST00000363497 74 ntBASIC0.6□□□□□ -2.31
RFX4Q33E94 RNU6-450P-201ENST00000364654 107 ntBASIC0.6□□□□□ -2.31
RFX4Q33E94 RNU6-442P-201ENST00000383968 104 ntBASIC0.6□□□□□ -2.31
RFX4Q33E94 SNORD38C-201ENST00000384381 69 ntBASIC0.6□□□□□ -2.31
RFX4Q33E94 Y_RNA.509-201ENST00000384506 99 ntBASIC0.6□□□□□ -2.31
RFX4Q33E94 MT-TD-201ENST00000387419 68 ntBASIC0.6□□□□□ -2.31
RFX4Q33E94 RNU6ATAC3P-201ENST00000387974 126 ntBASIC0.6□□□□□ -2.31
RFX4Q33E94 RNA5SP95-201ENST00000410319 137 ntBASIC0.6□□□□□ -2.31
RFX4Q33E94 FABP5P4-201ENST00000437203 171 ntBASIC0.6□□□□□ -2.31
RFX4Q33E94 MTATP6P23-201ENST00000440153 476 ntBASIC0.6□□□□□ -2.31
RFX4Q33E94 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC0.6□□□□□ -2.31
RFX4Q33E94 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC0.6□□□□□ -2.31
RFX4Q33E94 AL353765.1-201ENST00000605514 183 ntBASIC0.6□□□□□ -2.31
RFX4Q33E94 Pinc.1-201ENST00000616452 154 ntBASIC0.6□□□□□ -2.31
RFX4Q33E94 MIR520E-201ENST00000384867 87 ntBASIC0.59□□□□□ -2.31
RFX4Q33E94 MIR92A1-201ENST00000385233 78 ntBASIC0.59□□□□□ -2.31
RFX4Q33E94 MIR802-201ENST00000390235 94 ntBASIC0.59□□□□□ -2.31
RFX4Q33E94 U8.17-201ENST00000391292 132 ntBASIC0.59□□□□□ -2.31
RFX4Q33E94 MTCO2P33-201ENST00000402100 465 ntBASIC0.59□□□□□ -2.31
RFX4Q33E94 Y_RNA.602-201ENST00000410535 92 ntBASIC0.59□□□□□ -2.31
RFX4Q33E94 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.59□□□□□ -2.31
RFX4Q33E94 RNU6-496P-201ENST00000516145 99 ntBASIC0.59□□□□□ -2.31
RFX4Q33E94 RNU6-764P-201ENST00000516396 105 ntBASIC0.59□□□□□ -2.31
RFX4Q33E94 RNU7-181P-201ENST00000517234 74 ntBASIC0.59□□□□□ -2.31
RFX4Q33E94 AC104695.3-201ENST00000604052 296 ntBASIC0.59□□□□□ -2.31
RFX4Q33E94 AL590095.2-201ENST00000604136 117 ntBASIC0.59□□□□□ -2.31
RFX4Q33E94 AC124312.5-201ENST00000604451 268 ntBASIC0.59□□□□□ -2.31
RFX4Q33E94 MIR376A1-201ENST00000616574 68 ntBASIC0.59□□□□□ -2.31
RFX4Q33E94 MTND4P29-201ENST00000503122 1372 ntBASIC0.58□□□□□ -2.32
RFX4Q33E94 Y_RNA.136-201ENST00000363444 102 ntBASIC0.58□□□□□ -2.32
RFX4Q33E94 Y_RNA.394-201ENST00000383942 103 ntBASIC0.58□□□□□ -2.32
RFX4Q33E94 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC0.58□□□□□ -2.32
RFX4Q33E94 RNU6-763P-201ENST00000390865 106 ntBASIC0.58□□□□□ -2.32
RFX4Q33E94 SNORD115-46-201ENST00000390982 71 ntBASIC0.58□□□□□ -2.32
RFX4Q33E94 RNU6-823P-201ENST00000391042 103 ntBASIC0.58□□□□□ -2.32
RFX4Q33E94 RNU6-121P-201ENST00000410525 99 ntBASIC0.58□□□□□ -2.32
RFX4Q33E94 RNU6-733P-201ENST00000410759 104 ntBASIC0.58□□□□□ -2.32
RFX4Q33E94 RPS26P5-201ENST00000418544 335 ntBASIC0.58□□□□□ -2.32
RFX4Q33E94 RNU6-1170P-201ENST00000515974 106 ntBASIC0.58□□□□□ -2.32
RFX4Q33E94 RNU4-57P-201ENST00000515980 135 ntBASIC0.58□□□□□ -2.32
RFX4Q33E94 RNU11-2P-201ENST00000516898 142 ntBASIC0.58□□□□□ -2.32
RFX4Q33E94 Y_RNA.715-201ENST00000517082 110 ntBASIC0.58□□□□□ -2.32
RFX4Q33E94 RNU6-897P-201ENST00000517135 105 ntBASIC0.58□□□□□ -2.32
RFX4Q33E94 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC0.58□□□□□ -2.32
RFX4Q33E94 CYP3A137P-201ENST00000562436 69 ntBASIC0.58□□□□□ -2.32
RFX4Q33E94 AC006441.5-201ENST00000612680 209 ntBASIC0.58□□□□□ -2.32
RFX4Q33E94 Y_RNA.424-201ENST00000384063 103 ntBASIC0.57□□□□□ -2.32
RFX4Q33E94 Y_RNA.445-201ENST00000384168 102 ntBASIC0.57□□□□□ -2.32
RFX4Q33E94 RNU6-474P-201ENST00000384243 107 ntBASIC0.57□□□□□ -2.32
RFX4Q33E94 SNORD89-201ENST00000390981 114 ntBASIC0.57□□□□□ -2.32
RFX4Q33E94 MTCO1P5-201ENST00000433573 344 ntBASIC0.57□□□□□ -2.32
RFX4Q33E94 RPS29P1-201ENST00000465274 159 ntBASIC0.57□□□□□ -2.32
RFX4Q33E94 MRPS35P2-201ENST00000508242 191 ntBASIC0.57□□□□□ -2.32
RFX4Q33E94 AL117351.2-201ENST00000513571 157 ntBASIC0.57□□□□□ -2.32
RFX4Q33E94 RNU6-1007P-201ENST00000516586 107 ntBASIC0.57□□□□□ -2.32
RFX4Q33E94 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC0.57□□□□□ -2.32
RFX4Q33E94 DEFB108E-201ENST00000524692 240 ntBASIC0.57□□□□□ -2.32
RFX4Q33E94 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC0.57□□□□□ -2.32
RFX4Q33E94 AC133485.1-201ENST00000567176 124 ntBASIC0.57□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 540.5 ms