Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 AC091932.4-201ENST00000623386 200 ntBASIC2.79□□□□□ -1.96
PCDH1Q08174 AC027279.3-201ENST00000625055 122 ntBASIC2.79□□□□□ -1.96
PCDH1Q08174 MIR6733-201ENST00000635723 61 ntBASIC2.79□□□□□ -1.96
PCDH1Q08174 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.79□□□□□ -1.96
PCDH1Q08174 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
PCDH1Q08174 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
PCDH1Q08174 AL596211.1-201ENST00000569873 2277 ntBASIC2.79□□□□□ -1.96
PCDH1Q08174 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
PCDH1Q08174 MIR512-1-201ENST00000384913 84 ntBASIC2.78□□□□□ -1.96
PCDH1Q08174 RNY4P30-201ENST00000410216 95 ntBASIC2.78□□□□□ -1.96
PCDH1Q08174 RNA5SP492-201ENST00000411330 114 ntBASIC2.78□□□□□ -1.96
PCDH1Q08174 AC069257.2-201ENST00000441819 155 ntBASIC2.78□□□□□ -1.96
PCDH1Q08174 RNU6-830P-201ENST00000516353 107 ntBASIC2.78□□□□□ -1.96
PCDH1Q08174 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.78□□□□□ -1.96
PCDH1Q08174 IGKV3-31-201ENST00000523109 329 ntBASIC2.78□□□□□ -1.96
PCDH1Q08174 MIR4778-201ENST00000577635 80 ntBASIC2.78□□□□□ -1.96
PCDH1Q08174 MIR5094-201ENST00000578766 85 ntBASIC2.78□□□□□ -1.96
PCDH1Q08174 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC2.78□□□□□ -1.96
PCDH1Q08174 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.78□□□□□ -1.96
PCDH1Q08174 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.78□□□□□ -1.96
PCDH1Q08174 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.78□□□□□ -1.96
PCDH1Q08174 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
PCDH1Q08174 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.77□□□□□ -1.97
PCDH1Q08174 SNORD56.5-201ENST00000364281 72 ntBASIC2.77□□□□□ -1.97
PCDH1Q08174 Y_RNA.369-201ENST00000365568 117 ntBASIC2.77□□□□□ -1.97
PCDH1Q08174 RNU1-148P-201ENST00000384472 162 ntBASIC2.77□□□□□ -1.97
PCDH1Q08174 MT-TI-201ENST00000387365 69 ntBASIC2.77□□□□□ -1.97
PCDH1Q08174 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
PCDH1Q08174 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.77□□□□□ -1.97
PCDH1Q08174 RNU7-26P-201ENST00000458980 63 ntBASIC2.77□□□□□ -1.97
PCDH1Q08174 S100A11P2-201ENST00000467589 312 ntBASIC2.77□□□□□ -1.97
PCDH1Q08174 RNU7-123P-201ENST00000515911 60 ntBASIC2.77□□□□□ -1.97
PCDH1Q08174 RNA5SP281-201ENST00000516504 135 ntBASIC2.77□□□□□ -1.97
PCDH1Q08174 MIR4305-201ENST00000583252 102 ntBASIC2.77□□□□□ -1.97
PCDH1Q08174 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
PCDH1Q08174 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
PCDH1Q08174 Y_RNA.348-201ENST00000365403 103 ntBASIC2.76□□□□□ -1.97
PCDH1Q08174 RN7SKP200-201ENST00000410564 320 ntBASIC2.76□□□□□ -1.97
PCDH1Q08174 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC2.76□□□□□ -1.97
PCDH1Q08174 COTL1P1-201ENST00000422309 375 ntBASIC2.76□□□□□ -1.97
PCDH1Q08174 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC2.76□□□□□ -1.97
PCDH1Q08174 HSPE1P9-201ENST00000440046 311 ntBASIC2.76□□□□□ -1.97
PCDH1Q08174 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.75□□□□□ -1.97
PCDH1Q08174 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
PCDH1Q08174 MIR342-201ENST00000362212 99 ntBASIC2.75□□□□□ -1.97
PCDH1Q08174 SNORA25.6-201ENST00000364121 118 ntBASIC2.75□□□□□ -1.97
PCDH1Q08174 RNU6-1113P-201ENST00000384348 107 ntBASIC2.75□□□□□ -1.97
PCDH1Q08174 RNU6-905P-201ENST00000384434 107 ntBASIC2.75□□□□□ -1.97
PCDH1Q08174 Y_RNA.500-201ENST00000384466 111 ntBASIC2.75□□□□□ -1.97
PCDH1Q08174 UBE2DNL-203ENST00000474922 222 ntBASIC2.75□□□□□ -1.97
PCDH1Q08174 MIR3683-201ENST00000580847 82 ntBASIC2.75□□□□□ -1.97
PCDH1Q08174 MIR3605-201ENST00000583214 100 ntBASIC2.75□□□□□ -1.97
PCDH1Q08174 AC078899.2-201ENST00000595282 212 ntBASIC2.75□□□□□ -1.97
PCDH1Q08174 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.75□□□□□ -1.97
PCDH1Q08174 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.75□□□□□ -1.97
PCDH1Q08174 AP001318.4-201ENST00000616637 121 ntBASIC2.75□□□□□ -1.97
PCDH1Q08174 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.75□□□□□ -1.97
PCDH1Q08174 AL161431.1-201ENST00000618966 4205 ntBASIC2.75□□□□□ -1.97
PCDH1Q08174 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
PCDH1Q08174 MIR26A1-201ENST00000362205 77 ntBASIC2.74□□□□□ -1.97
PCDH1Q08174 Y_RNA.241-201ENST00000364470 117 ntBASIC2.74□□□□□ -1.97
PCDH1Q08174 U8.6-201ENST00000364939 135 ntBASIC2.74□□□□□ -1.97
PCDH1Q08174 SNORA27-201ENST00000384323 126 ntBASIC2.74□□□□□ -1.97
PCDH1Q08174 RNU6-424P-201ENST00000384367 105 ntBASIC2.74□□□□□ -1.97
PCDH1Q08174 RNU6-1104P-201ENST00000384723 104 ntBASIC2.74□□□□□ -1.97
PCDH1Q08174 MIR597-201ENST00000384968 97 ntBASIC2.74□□□□□ -1.97
PCDH1Q08174 RNU11-3P-201ENST00000391111 133 ntBASIC2.74□□□□□ -1.97
PCDH1Q08174 AL034345.1-201ENST00000407768 123 ntBASIC2.74□□□□□ -1.97
PCDH1Q08174 SNX2P2-201ENST00000424553 323 ntBASIC2.74□□□□□ -1.97
PCDH1Q08174 AL139132.1-201ENST00000431587 344 ntBASIC2.74□□□□□ -1.97
PCDH1Q08174 AC015922.2-201ENST00000435593 184 ntBASIC2.74□□□□□ -1.97
PCDH1Q08174 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.74□□□□□ -1.97
PCDH1Q08174 RNA5SP137-201ENST00000516833 135 ntBASIC2.74□□□□□ -1.97
PCDH1Q08174 HSPE1P19-201ENST00000603327 295 ntBASIC2.74□□□□□ -1.97
PCDH1Q08174 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.74□□□□□ -1.97
PCDH1Q08174 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
PCDH1Q08174 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.73□□□□□ -1.97
PCDH1Q08174 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.73□□□□□ -1.97
PCDH1Q08174 RNU4-16P-201ENST00000364737 141 ntBASIC2.73□□□□□ -1.97
PCDH1Q08174 RNU6-950P-201ENST00000384651 107 ntBASIC2.73□□□□□ -1.97
PCDH1Q08174 MIR548D2-201ENST00000384955 97 ntBASIC2.73□□□□□ -1.97
PCDH1Q08174 U8.16-201ENST00000391279 133 ntBASIC2.73□□□□□ -1.97
PCDH1Q08174 AL035398.1-201ENST00000430869 322 ntBASIC2.73□□□□□ -1.97
PCDH1Q08174 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.73□□□□□ -1.97
PCDH1Q08174 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.73□□□□□ -1.97
PCDH1Q08174 SNORA9.3-201ENST00000516383 129 ntBASIC2.73□□□□□ -1.97
PCDH1Q08174 RNU2-35P-201ENST00000516446 142 ntBASIC2.73□□□□□ -1.97
PCDH1Q08174 AC068339.1-201ENST00000526965 141 ntBASIC2.73□□□□□ -1.97
PCDH1Q08174 AC022523.2-201ENST00000561045 150 ntBASIC2.73□□□□□ -1.97
PCDH1Q08174 MIR5009-201ENST00000578736 100 ntBASIC2.73□□□□□ -1.97
PCDH1Q08174 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
PCDH1Q08174 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
PCDH1Q08174 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.72□□□□□ -1.97
PCDH1Q08174 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
PCDH1Q08174 RNU6-833P-201ENST00000363486 107 ntBASIC2.72□□□□□ -1.97
PCDH1Q08174 RNU6-640P-201ENST00000363693 105 ntBASIC2.72□□□□□ -1.97
PCDH1Q08174 Y_RNA.344-201ENST00000365381 112 ntBASIC2.72□□□□□ -1.97
PCDH1Q08174 RNU1-109P-201ENST00000383960 147 ntBASIC2.72□□□□□ -1.97
PCDH1Q08174 AC090821.2-201ENST00000523552 176 ntBASIC2.72□□□□□ -1.97
PCDH1Q08174 MIR3163-201ENST00000581592 73 ntBASIC2.72□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms