Protein–RNA interactions for Protein: Q02388

COL7A1, Collagen alpha-1(VII) chain, humanhuman

Predictions only

Length 2,944 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1Q02388 MIR5591-201ENST00000578248 65 ntBASIC-0.17□□□□□ -2.44
COL7A1Q02388 MIR3179-1-201ENST00000578940 84 ntBASIC-0.17□□□□□ -2.44
COL7A1Q02388 MIR3179-2-201ENST00000579107 84 ntBASIC-0.17□□□□□ -2.44
COL7A1Q02388 MIR3179-3-201ENST00000579566 84 ntBASIC-0.17□□□□□ -2.44
COL7A1Q02388 MIR4499-201ENST00000584834 69 ntBASIC-0.17□□□□□ -2.44
COL7A1Q02388 RNU6-85P-201ENST00000605989 107 ntBASIC-0.17□□□□□ -2.44
COL7A1Q02388 MIR3179-4-201ENST00000617599 84 ntBASIC-0.17□□□□□ -2.44
COL7A1Q02388 MTND1P7-201ENST00000632801 297 ntBASIC-0.17□□□□□ -2.44
COL7A1Q02388 MIR6079-201ENST00000635807 62 ntBASIC-0.17□□□□□ -2.44
COL7A1Q02388 RNU6-1115P-201ENST00000362490 106 ntBASIC-0.17□□□□□ -2.44
COL7A1Q02388 RNU6-873P-201ENST00000363833 107 ntBASIC-0.17□□□□□ -2.44
COL7A1Q02388 RNU1-141P-201ENST00000364623 158 ntBASIC-0.17□□□□□ -2.44
COL7A1Q02388 RNU6-934P-201ENST00000365154 107 ntBASIC-0.17□□□□□ -2.44
COL7A1Q02388 RNU6-715P-201ENST00000365204 103 ntBASIC-0.17□□□□□ -2.44
COL7A1Q02388 RNU6-117P-201ENST00000365415 107 ntBASIC-0.17□□□□□ -2.44
COL7A1Q02388 RNU6-442P-201ENST00000383968 104 ntBASIC-0.17□□□□□ -2.44
COL7A1Q02388 Y_RNA.497-201ENST00000384447 98 ntBASIC-0.17□□□□□ -2.44
COL7A1Q02388 SNORD28-201ENST00000384706 75 ntBASIC-0.17□□□□□ -2.44
COL7A1Q02388 MIR106A-201ENST00000384870 81 ntBASIC-0.17□□□□□ -2.44
COL7A1Q02388 MT-TY-201ENST00000387409 66 ntBASIC-0.17□□□□□ -2.44
COL7A1Q02388 U8.15-201ENST00000390947 134 ntBASIC-0.17□□□□□ -2.44
COL7A1Q02388 AL590002.1-201ENST00000406554 418 ntBASIC-0.17□□□□□ -2.44
COL7A1Q02388 MTCO3P19-201ENST00000415864 321 ntBASIC-0.17□□□□□ -2.44
COL7A1Q02388 RPL30P16-201ENST00000419341 429 ntBASIC-0.17□□□□□ -2.44
COL7A1Q02388 CYCSP46-201ENST00000423569 204 ntBASIC-0.17□□□□□ -2.44
COL7A1Q02388 UBE2D3P4-201ENST00000441973 436 ntBASIC-0.17□□□□□ -2.44
COL7A1Q02388 snoU13.6-201ENST00000458785 104 ntBASIC-0.17□□□□□ -2.44
COL7A1Q02388 RNU7-66P-201ENST00000459469 62 ntBASIC-0.17□□□□□ -2.44
COL7A1Q02388 MTCO2P29-201ENST00000465212 189 ntBASIC-0.17□□□□□ -2.44
COL7A1Q02388 RNU6-1114P-201ENST00000516022 107 ntBASIC-0.17□□□□□ -2.44
COL7A1Q02388 RNU7-25P-201ENST00000516544 62 ntBASIC-0.17□□□□□ -2.44
COL7A1Q02388 RNU6-980P-201ENST00000516925 103 ntBASIC-0.17□□□□□ -2.44
COL7A1Q02388 AC109479.2-201ENST00000517842 174 ntBASIC-0.17□□□□□ -2.44
COL7A1Q02388 MTND2P32-201ENST00000521584 1038 ntBASIC-0.17□□□□□ -2.44
COL7A1Q02388 AP003357.1-201ENST00000604497 148 ntBASIC-0.17□□□□□ -2.44
COL7A1Q02388 AL670379.3-201ENST00000605040 251 ntBASIC-0.17□□□□□ -2.44
COL7A1Q02388 AC104010.1-201ENST00000616889 150 ntBASIC-0.17□□□□□ -2.44
COL7A1Q02388 MIR6851-201ENST00000617060 67 ntBASIC-0.17□□□□□ -2.44
COL7A1Q02388 AC005562.2-201ENST00000618264 111 ntBASIC-0.17□□□□□ -2.44
COL7A1Q02388 U4.1-201ENST00000620349 87 ntBASIC-0.17□□□□□ -2.44
COL7A1Q02388 AC006435.5-201ENST00000624486 112 ntBASIC-0.17□□□□□ -2.44
COL7A1Q02388 AC008873.1-201ENST00000625051 138 ntBASIC-0.17□□□□□ -2.44
COL7A1Q02388 RNU5E-5P-201ENST00000365379 116 ntBASIC-0.17□□□□□ -2.44
COL7A1Q02388 RNU6-47P-201ENST00000383866 107 ntBASIC-0.17□□□□□ -2.44
COL7A1Q02388 RNU6-157P-201ENST00000383957 107 ntBASIC-0.17□□□□□ -2.44
COL7A1Q02388 Y_RNA.539-201ENST00000384635 107 ntBASIC-0.17□□□□□ -2.44
COL7A1Q02388 MIR517A-201ENST00000385001 87 ntBASIC-0.17□□□□□ -2.44
COL7A1Q02388 RNU6-1242P-201ENST00000391052 103 ntBASIC-0.17□□□□□ -2.44
COL7A1Q02388 Y_RNA.588-201ENST00000391254 102 ntBASIC-0.17□□□□□ -2.44
COL7A1Q02388 SNORA36B-201ENST00000410438 131 ntBASIC-0.17□□□□□ -2.44
COL7A1Q02388 RNU4-55P-201ENST00000410731 137 ntBASIC-0.17□□□□□ -2.44
COL7A1Q02388 RNU6-284P-201ENST00000411105 106 ntBASIC-0.17□□□□□ -2.44
COL7A1Q02388 AC096949.1-201ENST00000412047 152 ntBASIC-0.17□□□□□ -2.44
COL7A1Q02388 AL008987.1-201ENST00000415528 237 ntBASIC-0.17□□□□□ -2.44
COL7A1Q02388 MTATP6P18-201ENST00000417994 673 ntBASIC-0.17□□□□□ -2.44
COL7A1Q02388 AC236972.2-201ENST00000434979 310 ntBASIC-0.17□□□□□ -2.44
COL7A1Q02388 RNA5SP20-201ENST00000515976 84 ntBASIC-0.17□□□□□ -2.44
COL7A1Q02388 RNU6-881P-201ENST00000516813 102 ntBASIC-0.17□□□□□ -2.44
COL7A1Q02388 DEFB131E-201ENST00000532329 154 ntBASIC-0.17□□□□□ -2.44
COL7A1Q02388 MTND1P8-201ENST00000571424 950 ntBASIC-0.17□□□□□ -2.44
COL7A1Q02388 MIR3672-201ENST00000584290 82 ntBASIC-0.17□□□□□ -2.44
COL7A1Q02388 5S_rRNA.15-201ENST00000611169 127 ntBASIC-0.17□□□□□ -2.44
COL7A1Q02388 AC022306.2-201ENST00000617563 647 ntBASIC-0.17□□□□□ -2.44
COL7A1Q02388 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC-0.17□□□□□ -2.44
COL7A1Q02388 U6.114-201ENST00000636407 96 ntBASIC-0.17□□□□□ -2.44
COL7A1Q02388 AC099654.13-201ENST00000639774 207 ntBASIC-0.17□□□□□ -2.44
COL7A1Q02388 MIR30D-201ENST00000362283 70 ntBASIC-0.18□□□□□ -2.44
COL7A1Q02388 SNORD56.2-201ENST00000363242 71 ntBASIC-0.18□□□□□ -2.44
COL7A1Q02388 Y_RNA.135-201ENST00000363439 95 ntBASIC-0.18□□□□□ -2.44
COL7A1Q02388 RNY3P3-201ENST00000363816 102 ntBASIC-0.18□□□□□ -2.44
COL7A1Q02388 Y_RNA.221-201ENST00000364248 96 ntBASIC-0.18□□□□□ -2.44
COL7A1Q02388 Y_RNA.313-201ENST00000365095 103 ntBASIC-0.18□□□□□ -2.44
COL7A1Q02388 Y_RNA.315-201ENST00000365117 102 ntBASIC-0.18□□□□□ -2.44
COL7A1Q02388 RNU6-108P-201ENST00000365558 107 ntBASIC-0.18□□□□□ -2.44
COL7A1Q02388 Y_RNA.383-201ENST00000383855 97 ntBASIC-0.18□□□□□ -2.44
COL7A1Q02388 SNORA22B-201ENST00000383876 138 ntBASIC-0.18□□□□□ -2.44
COL7A1Q02388 RNU6-949P-201ENST00000384040 107 ntBASIC-0.18□□□□□ -2.44
COL7A1Q02388 Y_RNA.436-201ENST00000384097 102 ntBASIC-0.18□□□□□ -2.44
COL7A1Q02388 RNU6-455P-201ENST00000384681 107 ntBASIC-0.18□□□□□ -2.44
COL7A1Q02388 RNY3P9-201ENST00000384727 106 ntBASIC-0.18□□□□□ -2.44
COL7A1Q02388 SNORD12C-201ENST00000386307 89 ntBASIC-0.18□□□□□ -2.44
COL7A1Q02388 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC-0.18□□□□□ -2.44
COL7A1Q02388 RNU6-131P-201ENST00000391144 107 ntBASIC-0.18□□□□□ -2.44
COL7A1Q02388 AL031003.1-201ENST00000404229 172 ntBASIC-0.18□□□□□ -2.44
COL7A1Q02388 MIR1284-201ENST00000408337 120 ntBASIC-0.18□□□□□ -2.44
COL7A1Q02388 RNU5E-9P-201ENST00000411164 104 ntBASIC-0.18□□□□□ -2.44
COL7A1Q02388 RNU6-938P-201ENST00000411285 103 ntBASIC-0.18□□□□□ -2.44
COL7A1Q02388 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC-0.18□□□□□ -2.44
COL7A1Q02388 AL365203.2-201ENST00000423444 196 ntBASIC-0.18□□□□□ -2.44
COL7A1Q02388 EIF1P2-201ENST00000428233 350 ntBASIC-0.18□□□□□ -2.44
COL7A1Q02388 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC-0.18□□□□□ -2.44
COL7A1Q02388 AL137792.2-201ENST00000443484 235 ntBASIC-0.18□□□□□ -2.44
COL7A1Q02388 SNORD18.2-201ENST00000459604 70 ntBASIC-0.18□□□□□ -2.44
COL7A1Q02388 RNU6-107P-201ENST00000516643 102 ntBASIC-0.18□□□□□ -2.44
COL7A1Q02388 AP002963.1-201ENST00000530590 184 ntBASIC-0.18□□□□□ -2.44
COL7A1Q02388 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC-0.18□□□□□ -2.44
COL7A1Q02388 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC-0.18□□□□□ -2.44
COL7A1Q02388 MTND4LP25-201ENST00000570218 163 ntBASIC-0.18□□□□□ -2.44
COL7A1Q02388 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC-0.18□□□□□ -2.44
COL7A1Q02388 AC022140.2-201ENST00000623500 188 ntBASIC-0.18□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 323 ms