Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 RNU6-1337P-201ENST00000516525 95 ntBASIC-0.52□□□□□ -2.49
HSPG2P98160 RNU7-181P-201ENST00000517234 74 ntBASIC-0.52□□□□□ -2.49
HSPG2P98160 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC-0.52□□□□□ -2.49
HSPG2P98160 MTND1P24-201ENST00000552175 861 ntBASIC-0.52□□□□□ -2.49
HSPG2P98160 AC127459.3-201ENST00000624328 466 ntBASIC-0.52□□□□□ -2.49
HSPG2P98160 Y_RNA.184-201ENST00000363884 108 ntBASIC-0.52□□□□□ -2.49
HSPG2P98160 AL603914.1-201ENST00000401964 204 ntBASIC-0.52□□□□□ -2.49
HSPG2P98160 SNORD18.2-201ENST00000459604 70 ntBASIC-0.52□□□□□ -2.49
HSPG2P98160 AC010587.1-201ENST00000505809 469 ntBASIC-0.52□□□□□ -2.49
HSPG2P98160 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC-0.52□□□□□ -2.49
HSPG2P98160 MTND5P34-201ENST00000568888 325 ntBASIC-0.52□□□□□ -2.49
HSPG2P98160 AC080013.3-201ENST00000606839 578 ntBASIC-0.52□□□□□ -2.49
HSPG2P98160 AL391834.2-201ENST00000609982 546 ntBASIC-0.52□□□□□ -2.49
HSPG2P98160 SNORA72.3-201ENST00000365074 132 ntBASIC-0.53□□□□□ -2.49
HSPG2P98160 MIR181B2-201ENST00000385004 89 ntBASIC-0.53□□□□□ -2.49
HSPG2P98160 RNU6-576P-201ENST00000390854 102 ntBASIC-0.53□□□□□ -2.49
HSPG2P98160 SNORD115.1-201ENST00000391109 76 ntBASIC-0.53□□□□□ -2.49
HSPG2P98160 RNU6-855P-201ENST00000410395 104 ntBASIC-0.53□□□□□ -2.49
HSPG2P98160 AL117351.1-201ENST00000438864 766 ntBASIC-0.53□□□□□ -2.49
HSPG2P98160 AL359672.1-201ENST00000442302 409 ntBASIC-0.53□□□□□ -2.49
HSPG2P98160 MTATP6P15-201ENST00000527233 835 ntBASIC-0.53□□□□□ -2.49
HSPG2P98160 AC123904.2-201ENST00000548059 300 ntBASIC-0.53□□□□□ -2.49
HSPG2P98160 AL442663.2-201ENST00000554385 511 ntBASIC-0.53□□□□□ -2.49
HSPG2P98160 AC004223.4-201ENST00000612426 332 ntBASIC-0.53□□□□□ -2.49
HSPG2P98160 MIR8084-201ENST00000614105 89 ntBASIC-0.53□□□□□ -2.49
HSPG2P98160 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC-0.53□□□□□ -2.49
HSPG2P98160 AL445984.1-201ENST00000637834 659 ntBASIC-0.53□□□□□ -2.49
HSPG2P98160 Y_RNA.46-201ENST00000362695 102 ntBASIC-0.53□□□□□ -2.49
HSPG2P98160 SNORD50B-201ENST00000364995 70 ntBASIC-0.53□□□□□ -2.49
HSPG2P98160 Y_RNA.408-201ENST00000383987 102 ntBASIC-0.53□□□□□ -2.49
HSPG2P98160 RNU6-949P-201ENST00000384040 107 ntBASIC-0.53□□□□□ -2.49
HSPG2P98160 RNU6-207P-201ENST00000384137 107 ntBASIC-0.53□□□□□ -2.49
HSPG2P98160 RNU6-602P-201ENST00000411155 105 ntBASIC-0.53□□□□□ -2.49
HSPG2P98160 MTND4P3-201ENST00000417829 541 ntBASIC-0.53□□□□□ -2.49
HSPG2P98160 USP9YP16-201ENST00000430287 407 ntBASIC-0.53□□□□□ -2.49
HSPG2P98160 snoU13.6-201ENST00000458785 104 ntBASIC-0.53□□□□□ -2.49
HSPG2P98160 SCARNA18B-201ENST00000458806 135 ntBASIC-0.53□□□□□ -2.49
HSPG2P98160 RNU6-966P-201ENST00000516479 104 ntBASIC-0.53□□□□□ -2.49
HSPG2P98160 SNORA25.17-201ENST00000517184 124 ntBASIC-0.53□□□□□ -2.49
HSPG2P98160 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC-0.53□□□□□ -2.49
HSPG2P98160 RNU6-85P-201ENST00000605989 107 ntBASIC-0.53□□□□□ -2.49
HSPG2P98160 RMST_3.1-201ENST00000611651 109 ntBASIC-0.53□□□□□ -2.49
HSPG2P98160 MIR6854-201ENST00000614935 69 ntBASIC-0.53□□□□□ -2.49
HSPG2P98160 AL354950.2-201ENST00000617939 290 ntBASIC-0.53□□□□□ -2.49
HSPG2P98160 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC-0.53□□□□□ -2.49
HSPG2P98160 Y_RNA.1-201ENST00000352915 104 ntBASIC-0.53□□□□□ -2.49
HSPG2P98160 Y_RNA.263-201ENST00000364659 114 ntBASIC-0.53□□□□□ -2.49
HSPG2P98160 RNU6-541P-201ENST00000384709 110 ntBASIC-0.53□□□□□ -2.49
HSPG2P98160 SNORD12C-201ENST00000386307 89 ntBASIC-0.53□□□□□ -2.49
HSPG2P98160 ELOCP4-201ENST00000420090 333 ntBASIC-0.53□□□□□ -2.49
HSPG2P98160 MTATP6P26-201ENST00000445926 662 ntBASIC-0.53□□□□□ -2.49
HSPG2P98160 USP9YP12-201ENST00000450481 570 ntBASIC-0.53□□□□□ -2.49
HSPG2P98160 AC010655.3-201ENST00000478818 450 ntBASIC-0.53□□□□□ -2.49
HSPG2P98160 SNORD27.1-201ENST00000516319 72 ntBASIC-0.53□□□□□ -2.49
HSPG2P98160 AC002044.1-201ENST00000606707 158 ntBASIC-0.53□□□□□ -2.49
HSPG2P98160 MTND1P7-201ENST00000632801 297 ntBASIC-0.53□□□□□ -2.49
HSPG2P98160 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC-0.54□□□□□ -2.5
HSPG2P98160 SNORD115-25-201ENST00000362619 82 ntBASIC-0.54□□□□□ -2.5
HSPG2P98160 SNORA69-201ENST00000383895 132 ntBASIC-0.54□□□□□ -2.5
HSPG2P98160 SNORD64-201ENST00000386683 67 ntBASIC-0.54□□□□□ -2.5
HSPG2P98160 AL445193.1-201ENST00000441183 141 ntBASIC-0.54□□□□□ -2.5
HSPG2P98160 MTCO1P29-201ENST00000496868 288 ntBASIC-0.54□□□□□ -2.5
HSPG2P98160 RNA5SP20-201ENST00000515976 84 ntBASIC-0.54□□□□□ -2.5
HSPG2P98160 RNU4ATAC4P-201ENST00000516307 126 ntBASIC-0.54□□□□□ -2.5
HSPG2P98160 RNU7-188P-201ENST00000517063 64 ntBASIC-0.54□□□□□ -2.5
HSPG2P98160 AC005972.2-201ENST00000604690 348 ntBASIC-0.54□□□□□ -2.5
HSPG2P98160 AC018714.1-201ENST00000605028 208 ntBASIC-0.54□□□□□ -2.5
HSPG2P98160 Y_RNA.38-201ENST00000362617 102 ntBASIC-0.54□□□□□ -2.5
HSPG2P98160 SNORD56.2-201ENST00000363242 71 ntBASIC-0.54□□□□□ -2.5
HSPG2P98160 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-0.54□□□□□ -2.5
HSPG2P98160 RNU6-1250P-201ENST00000391218 107 ntBASIC-0.54□□□□□ -2.5
HSPG2P98160 AL008987.1-201ENST00000415528 237 ntBASIC-0.54□□□□□ -2.5
HSPG2P98160 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC-0.54□□□□□ -2.5
HSPG2P98160 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC-0.54□□□□□ -2.5
HSPG2P98160 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC-0.54□□□□□ -2.5
HSPG2P98160 MRPS18CP4-201ENST00000535821 231 ntBASIC-0.54□□□□□ -2.5
HSPG2P98160 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC-0.54□□□□□ -2.5
HSPG2P98160 AL450270.1-201ENST00000606160 391 ntBASIC-0.54□□□□□ -2.5
HSPG2P98160 AC072046.2-201ENST00000618366 268 ntBASIC-0.54□□□□□ -2.5
HSPG2P98160 SNORD115-34-201ENST00000362441 82 ntBASIC-0.54□□□□□ -2.5
HSPG2P98160 Y_RNA.22-201ENST00000362492 102 ntBASIC-0.54□□□□□ -2.5
HSPG2P98160 SNORD115-12-201ENST00000362583 82 ntBASIC-0.54□□□□□ -2.5
HSPG2P98160 SNORD115-29-201ENST00000362834 82 ntBASIC-0.54□□□□□ -2.5
HSPG2P98160 SNORD115-9-201ENST00000362912 82 ntBASIC-0.54□□□□□ -2.5
HSPG2P98160 SNORD115-21-201ENST00000362963 81 ntBASIC-0.54□□□□□ -2.5
HSPG2P98160 SNORD115-14-201ENST00000363090 81 ntBASIC-0.54□□□□□ -2.5
HSPG2P98160 SNORD115-13-201ENST00000363358 82 ntBASIC-0.54□□□□□ -2.5
HSPG2P98160 SNORD115-11-201ENST00000363616 82 ntBASIC-0.54□□□□□ -2.5
HSPG2P98160 SNORD115-5-201ENST00000363633 82 ntBASIC-0.54□□□□□ -2.5
HSPG2P98160 SNORD115-39-201ENST00000363694 82 ntBASIC-0.54□□□□□ -2.5
HSPG2P98160 SNORD115-4-201ENST00000363810 82 ntBASIC-0.54□□□□□ -2.5
HSPG2P98160 SNORD115-16-201ENST00000363887 82 ntBASIC-0.54□□□□□ -2.5
HSPG2P98160 SNORD115-6-201ENST00000363942 82 ntBASIC-0.54□□□□□ -2.5
HSPG2P98160 SNORD115-15-201ENST00000364809 81 ntBASIC-0.54□□□□□ -2.5
HSPG2P98160 SNORD115-1-201ENST00000364961 82 ntBASIC-0.54□□□□□ -2.5
HSPG2P98160 SNORD115-26-201ENST00000365067 82 ntBASIC-0.54□□□□□ -2.5
HSPG2P98160 SNORD115-10-201ENST00000365073 81 ntBASIC-0.54□□□□□ -2.5
HSPG2P98160 SNORD115-43-201ENST00000365503 82 ntBASIC-0.54□□□□□ -2.5
HSPG2P98160 SNORD115-36-201ENST00000365629 82 ntBASIC-0.54□□□□□ -2.5
HSPG2P98160 RNU6-551P-201ENST00000516661 103 ntBASIC-0.54□□□□□ -2.5
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms