Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 RNU6-1007P-201ENST00000516586 107 ntBASIC0.37□□□□□ -2.35
CBX1P83916 RNU6-699P-201ENST00000517081 110 ntBASIC0.37□□□□□ -2.35
CBX1P83916 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.37□□□□□ -2.35
CBX1P83916 AL080274.1-201ENST00000605565 220 ntBASIC0.37□□□□□ -2.35
CBX1P83916 AC010205.1-201ENST00000616668 449 ntBASIC0.37□□□□□ -2.35
CBX1P83916 SNORD81.1-201ENST00000363064 77 ntBASIC0.36□□□□□ -2.35
CBX1P83916 Y_RNA.242-201ENST00000364473 110 ntBASIC0.36□□□□□ -2.35
CBX1P83916 RNU6-580P-201ENST00000365159 107 ntBASIC0.36□□□□□ -2.35
CBX1P83916 MIR520F-201ENST00000384824 87 ntBASIC0.36□□□□□ -2.35
CBX1P83916 MIR520H-201ENST00000385126 88 ntBASIC0.36□□□□□ -2.35
CBX1P83916 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.36□□□□□ -2.35
CBX1P83916 RNU6-977P-201ENST00000516411 103 ntBASIC0.36□□□□□ -2.35
CBX1P83916 RNU7-110P-201ENST00000516891 62 ntBASIC0.36□□□□□ -2.35
CBX1P83916 Y_RNA.772-201ENST00000606692 102 ntBASIC0.36□□□□□ -2.35
CBX1P83916 AC011373.1-201ENST00000607270 237 ntBASIC0.36□□□□□ -2.35
CBX1P83916 RNU6-205P-201ENST00000390858 107 ntBASIC0.35□□□□□ -2.35
CBX1P83916 RNU6ATAC25P-201ENST00000408798 117 ntBASIC0.35□□□□□ -2.35
CBX1P83916 RNU6-847P-201ENST00000411115 108 ntBASIC0.35□□□□□ -2.35
CBX1P83916 MTCO2P12-201ENST00000427426 682 ntBASIC0.35□□□□□ -2.35
CBX1P83916 snoU13.21-201ENST00000459368 105 ntBASIC0.35□□□□□ -2.35
CBX1P83916 RNU6-437P-201ENST00000459408 95 ntBASIC0.35□□□□□ -2.35
CBX1P83916 SNORA68.3-201ENST00000515906 83 ntBASIC0.35□□□□□ -2.35
CBX1P83916 RPL23AP91-201ENST00000569211 455 ntBASIC0.35□□□□□ -2.35
CBX1P83916 AC006441.5-201ENST00000612680 209 ntBASIC0.35□□□□□ -2.35
CBX1P83916 U6atac.1-201ENST00000616025 117 ntBASIC0.35□□□□□ -2.35
CBX1P83916 MIR6515-201ENST00000619843 57 ntBASIC0.35□□□□□ -2.35
CBX1P83916 MIR6513-201ENST00000621188 64 ntBASIC0.35□□□□□ -2.35
CBX1P83916 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.35□□□□□ -2.35
CBX1P83916 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.34□□□□□ -2.35
CBX1P83916 SNORD45.3-201ENST00000363836 72 ntBASIC0.34□□□□□ -2.36
CBX1P83916 Y_RNA.259-201ENST00000364619 101 ntBASIC0.34□□□□□ -2.36
CBX1P83916 RNU6-934P-201ENST00000365154 107 ntBASIC0.34□□□□□ -2.36
CBX1P83916 SNORD72-201ENST00000390994 80 ntBASIC0.34□□□□□ -2.36
CBX1P83916 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.34□□□□□ -2.36
CBX1P83916 MIR3145-201ENST00000580727 82 ntBASIC0.34□□□□□ -2.36
CBX1P83916 AC243829.6-201ENST00000612652 106 ntBASIC0.34□□□□□ -2.36
CBX1P83916 MIR4272-201ENST00000635924 64 ntBASIC0.34□□□□□ -2.36
CBX1P83916 RNU6-674P-201ENST00000363831 107 ntBASIC0.33□□□□□ -2.36
CBX1P83916 RNU4-45P-201ENST00000365469 141 ntBASIC0.33□□□□□ -2.36
CBX1P83916 RNU6-1040P-201ENST00000383974 107 ntBASIC0.33□□□□□ -2.36
CBX1P83916 Y_RNA.428-201ENST00000384078 102 ntBASIC0.33□□□□□ -2.36
CBX1P83916 RNY1P14-201ENST00000384426 108 ntBASIC0.33□□□□□ -2.36
CBX1P83916 RNU6-342P-201ENST00000384521 104 ntBASIC0.33□□□□□ -2.36
CBX1P83916 MIR518E-201ENST00000385252 88 ntBASIC0.33□□□□□ -2.36
CBX1P83916 MIR1278-201ENST00000408753 81 ntBASIC0.33□□□□□ -2.36
CBX1P83916 SNORA36B-201ENST00000410438 131 ntBASIC0.33□□□□□ -2.36
CBX1P83916 SNORD83.1-201ENST00000411362 77 ntBASIC0.33□□□□□ -2.36
CBX1P83916 AC092628.1-201ENST00000436250 252 ntBASIC0.33□□□□□ -2.36
CBX1P83916 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.33□□□□□ -2.36
CBX1P83916 MIR4771-2-201ENST00000577758 74 ntBASIC0.33□□□□□ -2.36
CBX1P83916 MIR4771-1-201ENST00000582617 74 ntBASIC0.33□□□□□ -2.36
CBX1P83916 MIR4264-201ENST00000583520 66 ntBASIC0.33□□□□□ -2.36
CBX1P83916 uc_338.4-201ENST00000616635 176 ntBASIC0.33□□□□□ -2.36
CBX1P83916 MTND4LP32-201ENST00000636111 270 ntBASIC0.33□□□□□ -2.36
CBX1P83916 MIR18A-201ENST00000362310 71 ntBASIC0.32□□□□□ -2.36
CBX1P83916 Y_RNA.116-201ENST00000363292 103 ntBASIC0.32□□□□□ -2.36
CBX1P83916 RNU1-133P-201ENST00000364867 167 ntBASIC0.32□□□□□ -2.36
CBX1P83916 AL603910.2-201ENST00000407268 136 ntBASIC0.32□□□□□ -2.36
CBX1P83916 RNU2-13P-201ENST00000515909 113 ntBASIC0.32□□□□□ -2.36
CBX1P83916 SNORD116.3-201ENST00000517176 78 ntBASIC0.32□□□□□ -2.36
CBX1P83916 MIR3612-201ENST00000579753 87 ntBASIC0.32□□□□□ -2.36
CBX1P83916 AC092794.1-201ENST00000612734 582 ntBASIC0.32□□□□□ -2.36
CBX1P83916 MIRLET7D-201ENST00000362263 87 ntBASIC0.31□□□□□ -2.36
CBX1P83916 Y_RNA.248-201ENST00000364501 109 ntBASIC0.31□□□□□ -2.36
CBX1P83916 Y_RNA.387-201ENST00000383918 102 ntBASIC0.31□□□□□ -2.36
CBX1P83916 RNU6-125P-201ENST00000384505 107 ntBASIC0.31□□□□□ -2.36
CBX1P83916 RNY4P36-201ENST00000391116 96 ntBASIC0.31□□□□□ -2.36
CBX1P83916 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.31□□□□□ -2.36
CBX1P83916 RNU7-141P-201ENST00000459304 62 ntBASIC0.31□□□□□ -2.36
CBX1P83916 SNORA4-201ENST00000584302 138 ntBASIC0.31□□□□□ -2.36
CBX1P83916 AL162730.1-201ENST00000605734 292 ntBASIC0.31□□□□□ -2.36
CBX1P83916 DLEU2_2.2-201ENST00000615474 90 ntBASIC0.31□□□□□ -2.36
CBX1P83916 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.3□□□□□ -2.36
CBX1P83916 Y_RNA.458-201ENST00000384240 102 ntBASIC0.3□□□□□ -2.36
CBX1P83916 RNU6-21P-201ENST00000384710 107 ntBASIC0.3□□□□□ -2.36
CBX1P83916 AC015818.7-201ENST00000428754 109 ntBASIC0.3□□□□□ -2.36
CBX1P83916 AC087499.7-201ENST00000441958 109 ntBASIC0.3□□□□□ -2.36
CBX1P83916 SNORD11-201ENST00000459124 84 ntBASIC0.3□□□□□ -2.36
CBX1P83916 RNA5SP134-201ENST00000516492 96 ntBASIC0.3□□□□□ -2.36
CBX1P83916 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC0.3□□□□□ -2.36
CBX1P83916 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC0.3□□□□□ -2.36
CBX1P83916 RPS29P30-201ENST00000600975 111 ntBASIC0.3□□□□□ -2.36
CBX1P83916 AL121655.1-201ENST00000605811 308 ntBASIC0.3□□□□□ -2.36
CBX1P83916 AC090625.1-201ENST00000357130 210 ntBASIC0.29□□□□□ -2.36
CBX1P83916 Y_RNA.463-201ENST00000384271 102 ntBASIC0.29□□□□□ -2.36
CBX1P83916 SNORD116-29-201ENST00000384516 83 ntBASIC0.29□□□□□ -2.36
CBX1P83916 Y_RNA.551-201ENST00000384661 102 ntBASIC0.29□□□□□ -2.36
CBX1P83916 RNU4-30P-201ENST00000410245 143 ntBASIC0.29□□□□□ -2.36
CBX1P83916 AC107297.1-201ENST00000459991 176 ntBASIC0.29□□□□□ -2.36
CBX1P83916 RNU6-496P-201ENST00000516145 99 ntBASIC0.29□□□□□ -2.36
CBX1P83916 MIR4804-201ENST00000581683 73 ntBASIC0.29□□□□□ -2.36
CBX1P83916 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC0.29□□□□□ -2.36
CBX1P83916 MIR5093-201ENST00000583199 100 ntBASIC0.29□□□□□ -2.36
CBX1P83916 AL138825.1-201ENST00000618587 192 ntBASIC0.29□□□□□ -2.36
CBX1P83916 RNU6-1048P-201ENST00000364054 107 ntBASIC0.28□□□□□ -2.36
CBX1P83916 RNU4-50P-201ENST00000364361 141 ntBASIC0.28□□□□□ -2.36
CBX1P83916 SNORA72.4-201ENST00000384174 132 ntBASIC0.28□□□□□ -2.36
CBX1P83916 SNORD63-201ENST00000384262 68 ntBASIC0.28□□□□□ -2.36
CBX1P83916 MIR216A-201ENST00000385063 110 ntBASIC0.28□□□□□ -2.36
CBX1P83916 RNU6ATAC19P-201ENST00000408096 110 ntBASIC0.28□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 186.5 ms