Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 MTATP6P15-201ENST00000527233 835 ntBASIC-0.9□□□□□ -2.55
PRKDCP78527 RNU4-28P-201ENST00000364739 141 ntBASIC-0.9□□□□□ -2.55
PRKDCP78527 SNORD56B-201ENST00000384713 71 ntBASIC-0.9□□□□□ -2.55
PRKDCP78527 MIR548K-201ENST00000408406 116 ntBASIC-0.9□□□□□ -2.55
PRKDCP78527 AC018710.1-201ENST00000506509 158 ntBASIC-0.9□□□□□ -2.55
PRKDCP78527 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC-0.9□□□□□ -2.55
PRKDCP78527 Y_RNA.426-201ENST00000384068 113 ntBASIC-0.91□□□□□ -2.55
PRKDCP78527 RNU6-900P-201ENST00000384498 102 ntBASIC-0.91□□□□□ -2.55
PRKDCP78527 RNU6-607P-201ENST00000411283 108 ntBASIC-0.91□□□□□ -2.55
PRKDCP78527 MTND4P3-201ENST00000417829 541 ntBASIC-0.91□□□□□ -2.55
PRKDCP78527 RNU6-1003P-201ENST00000517099 105 ntBASIC-0.91□□□□□ -2.55
PRKDCP78527 MIR4520-1-201ENST00000582609 70 ntBASIC-0.91□□□□□ -2.55
PRKDCP78527 SNORD116-9-201ENST00000384000 95 ntBASIC-0.91□□□□□ -2.55
PRKDCP78527 SNORD116-3-201ENST00000384287 95 ntBASIC-0.91□□□□□ -2.55
PRKDCP78527 SNORD116-8-201ENST00000384365 95 ntBASIC-0.91□□□□□ -2.55
PRKDCP78527 SNORD116-7-201ENST00000384404 95 ntBASIC-0.91□□□□□ -2.55
PRKDCP78527 SNORD116-5-201ENST00000384462 95 ntBASIC-0.91□□□□□ -2.55
PRKDCP78527 RNU6-393P-201ENST00000384475 107 ntBASIC-0.91□□□□□ -2.55
PRKDCP78527 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-0.91□□□□□ -2.55
PRKDCP78527 Y_RNA.621-201ENST00000411065 96 ntBASIC-0.91□□□□□ -2.55
PRKDCP78527 RNU6-602P-201ENST00000411155 105 ntBASIC-0.91□□□□□ -2.55
PRKDCP78527 RNA5SP484-201ENST00000458857 111 ntBASIC-0.91□□□□□ -2.55
PRKDCP78527 SNORA25.16-201ENST00000516741 121 ntBASIC-0.91□□□□□ -2.55
PRKDCP78527 RNU7-161P-201ENST00000517289 62 ntBASIC-0.91□□□□□ -2.55
PRKDCP78527 PIGPP4-201ENST00000584447 307 ntBASIC-0.91□□□□□ -2.55
PRKDCP78527 AC080013.3-201ENST00000606839 578 ntBASIC-0.91□□□□□ -2.55
PRKDCP78527 Y_RNA.151-201ENST00000363566 112 ntBASIC-0.91□□□□□ -2.56
PRKDCP78527 SNORA69-201ENST00000383895 132 ntBASIC-0.91□□□□□ -2.56
PRKDCP78527 SNORA25.13-201ENST00000516395 103 ntBASIC-0.91□□□□□ -2.56
PRKDCP78527 RNU6-551P-201ENST00000516661 103 ntBASIC-0.91□□□□□ -2.56
PRKDCP78527 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC-0.91□□□□□ -2.56
PRKDCP78527 MIR3118-1-201ENST00000581787 76 ntBASIC-0.91□□□□□ -2.56
PRKDCP78527 AP001330.5-201ENST00000607176 411 ntBASIC-0.91□□□□□ -2.56
PRKDCP78527 AC245297.2-201ENST00000610119 565 ntBASIC-0.91□□□□□ -2.56
PRKDCP78527 RMST_3.1-201ENST00000611651 109 ntBASIC-0.91□□□□□ -2.56
PRKDCP78527 RNU6-324P-201ENST00000363957 106 ntBASIC-0.91□□□□□ -2.56
PRKDCP78527 RNU6-407P-201ENST00000365280 104 ntBASIC-0.91□□□□□ -2.56
PRKDCP78527 RNU6-517P-201ENST00000384362 110 ntBASIC-0.91□□□□□ -2.56
PRKDCP78527 MRPL42P2-201ENST00000403169 426 ntBASIC-0.91□□□□□ -2.56
PRKDCP78527 MIR548H1-201ENST00000408610 102 ntBASIC-0.91□□□□□ -2.56
PRKDCP78527 FRG2DP-202ENST00000566967 323 ntBASIC-0.91□□□□□ -2.56
PRKDCP78527 RNU6-560P-201ENST00000364007 108 ntBASIC-0.92□□□□□ -2.56
PRKDCP78527 Y_RNA.617-201ENST00000410920 90 ntBASIC-0.92□□□□□ -2.56
PRKDCP78527 RNU7-188P-201ENST00000517063 64 ntBASIC-0.92□□□□□ -2.56
PRKDCP78527 MTND1P35-201ENST00000526739 508 ntBASIC-0.92□□□□□ -2.56
PRKDCP78527 RNU6-462P-201ENST00000362659 105 ntBASIC-0.92□□□□□ -2.56
PRKDCP78527 Y_RNA.313-201ENST00000365095 103 ntBASIC-0.92□□□□□ -2.56
PRKDCP78527 SNORA20B-201ENST00000384220 132 ntBASIC-0.92□□□□□ -2.56
PRKDCP78527 MIR518F-201ENST00000384973 87 ntBASIC-0.92□□□□□ -2.56
PRKDCP78527 MIR1284-201ENST00000408337 120 ntBASIC-0.92□□□□□ -2.56
PRKDCP78527 AC244505.6-201ENST00000452829 130 ntBASIC-0.92□□□□□ -2.56
PRKDCP78527 RNU6-830P-201ENST00000516353 107 ntBASIC-0.92□□□□□ -2.56
PRKDCP78527 MTND2P32-201ENST00000521584 1038 ntBASIC-0.92□□□□□ -2.56
PRKDCP78527 AL136370.1-201ENST00000608166 691 ntBASIC-0.92□□□□□ -2.56
PRKDCP78527 AL354950.2-201ENST00000617939 290 ntBASIC-0.92□□□□□ -2.56
PRKDCP78527 RNU6-702P-201ENST00000364982 107 ntBASIC-0.92□□□□□ -2.56
PRKDCP78527 Y_RNA.415-201ENST00000384012 112 ntBASIC-0.92□□□□□ -2.56
PRKDCP78527 MIR521-1-201ENST00000384902 87 ntBASIC-0.92□□□□□ -2.56
PRKDCP78527 MIR487A-201ENST00000385009 80 ntBASIC-0.92□□□□□ -2.56
PRKDCP78527 AP002371.2-201ENST00000624450 503 ntBASIC-0.92□□□□□ -2.56
PRKDCP78527 SNORD115-8-201ENST00000363856 82 ntBASIC-0.93□□□□□ -2.56
PRKDCP78527 Y_RNA.220-201ENST00000364244 109 ntBASIC-0.93□□□□□ -2.56
PRKDCP78527 SNORD115-38-201ENST00000365037 82 ntBASIC-0.93□□□□□ -2.56
PRKDCP78527 Y_RNA.539-201ENST00000384635 107 ntBASIC-0.93□□□□□ -2.56
PRKDCP78527 MIR9-2-201ENST00000384838 87 ntBASIC-0.93□□□□□ -2.56
PRKDCP78527 AL158053.1-201ENST00000441503 453 ntBASIC-0.93□□□□□ -2.56
PRKDCP78527 RNU6-685P-201ENST00000517088 95 ntBASIC-0.93□□□□□ -2.56
PRKDCP78527 AC005972.2-201ENST00000604690 348 ntBASIC-0.93□□□□□ -2.56
PRKDCP78527 SNORD56.2-201ENST00000363242 71 ntBASIC-0.93□□□□□ -2.56
PRKDCP78527 Y_RNA.184-201ENST00000363884 108 ntBASIC-0.93□□□□□ -2.56
PRKDCP78527 RNU6-117P-201ENST00000365415 107 ntBASIC-0.93□□□□□ -2.56
PRKDCP78527 RNU6-430P-201ENST00000517078 107 ntBASIC-0.93□□□□□ -2.56
PRKDCP78527 MIR548H5-201ENST00000580314 60 ntBASIC-0.93□□□□□ -2.56
PRKDCP78527 Y_RNA.10-201ENST00000362371 110 ntBASIC-0.93□□□□□ -2.56
PRKDCP78527 Y_RNA.284-201ENST00000364806 102 ntBASIC-0.93□□□□□ -2.56
PRKDCP78527 SNORA1-201ENST00000384107 130 ntBASIC-0.93□□□□□ -2.56
PRKDCP78527 AC022616.4-201ENST00000522985 181 ntBASIC-0.93□□□□□ -2.56
PRKDCP78527 MTND1P7-201ENST00000632801 297 ntBASIC-0.93□□□□□ -2.56
PRKDCP78527 MIR588-201ENST00000384900 83 ntBASIC-0.94□□□□□ -2.56
PRKDCP78527 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC-0.94□□□□□ -2.56
PRKDCP78527 RNU6-803P-201ENST00000516034 102 ntBASIC-0.94□□□□□ -2.56
PRKDCP78527 MRPS18CP4-201ENST00000535821 231 ntBASIC-0.94□□□□□ -2.56
PRKDCP78527 AC027449.1-201ENST00000608890 407 ntBASIC-0.94□□□□□ -2.56
PRKDCP78527 MIR8084-201ENST00000614105 89 ntBASIC-0.94□□□□□ -2.56
PRKDCP78527 AC072046.2-201ENST00000618366 268 ntBASIC-0.94□□□□□ -2.56
PRKDCP78527 SNORD115-34-201ENST00000362441 82 ntBASIC-0.94□□□□□ -2.56
PRKDCP78527 SNORD115-12-201ENST00000362583 82 ntBASIC-0.94□□□□□ -2.56
PRKDCP78527 SNORD115-29-201ENST00000362834 82 ntBASIC-0.94□□□□□ -2.56
PRKDCP78527 SNORD115-9-201ENST00000362912 82 ntBASIC-0.94□□□□□ -2.56
PRKDCP78527 SNORD115-21-201ENST00000362963 81 ntBASIC-0.94□□□□□ -2.56
PRKDCP78527 SNORD115-14-201ENST00000363090 81 ntBASIC-0.94□□□□□ -2.56
PRKDCP78527 SNORD115-13-201ENST00000363358 82 ntBASIC-0.94□□□□□ -2.56
PRKDCP78527 SNORD115-11-201ENST00000363616 82 ntBASIC-0.94□□□□□ -2.56
PRKDCP78527 SNORD115-5-201ENST00000363633 82 ntBASIC-0.94□□□□□ -2.56
PRKDCP78527 SNORD115-39-201ENST00000363694 82 ntBASIC-0.94□□□□□ -2.56
PRKDCP78527 SNORD115-4-201ENST00000363810 82 ntBASIC-0.94□□□□□ -2.56
PRKDCP78527 SNORD115-16-201ENST00000363887 82 ntBASIC-0.94□□□□□ -2.56
PRKDCP78527 SNORD115-6-201ENST00000363942 82 ntBASIC-0.94□□□□□ -2.56
PRKDCP78527 SNORD115-15-201ENST00000364809 81 ntBASIC-0.94□□□□□ -2.56
PRKDCP78527 SNORD115-1-201ENST00000364961 82 ntBASIC-0.94□□□□□ -2.56
Retrieved 100 of 98,524 protein–RNA pairs in 169.3 ms