Protein–RNA interactions for Protein: P78367

NKX3-2, Homeobox protein Nkx-3.2, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-2P78367 AC011753.1-201ENST00000451001 220 ntBASIC2.52□□□□□ -2.01
NKX3-2P78367 RNU7-26P-201ENST00000458980 63 ntBASIC2.52□□□□□ -2.01
NKX3-2P78367 AL049830.1-201ENST00000468034 425 ntBASIC2.52□□□□□ -2.01
NKX3-2P78367 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.52□□□□□ -2.01
NKX3-2P78367 RNA5SP200-201ENST00000516360 103 ntBASIC2.52□□□□□ -2.01
NKX3-2P78367 RNU6-1061P-201ENST00000516530 99 ntBASIC2.52□□□□□ -2.01
NKX3-2P78367 AL358944.1-201ENST00000528537 144 ntBASIC2.52□□□□□ -2.01
NKX3-2P78367 AC133485.4-201ENST00000561835 220 ntBASIC2.52□□□□□ -2.01
NKX3-2P78367 AC138907.4-201ENST00000570107 226 ntBASIC2.52□□□□□ -2.01
NKX3-2P78367 AL449363.1-201ENST00000617815 186 ntBASIC2.52□□□□□ -2.01
NKX3-2P78367 MIR6766-201ENST00000622641 72 ntBASIC2.52□□□□□ -2.01
NKX3-2P78367 MIR6873-201ENST00000622788 63 ntBASIC2.52□□□□□ -2.01
NKX3-2P78367 AC245060.5-201ENST00000610778 3293 ntBASIC2.52□□□□□ -2.01
NKX3-2P78367 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC2.52□□□□□ -2.01
NKX3-2P78367 SNORA63.4-201ENST00000362763 126 ntBASIC2.51□□□□□ -2.01
NKX3-2P78367 RNU6-153P-201ENST00000364422 104 ntBASIC2.51□□□□□ -2.01
NKX3-2P78367 MIR548A2-201ENST00000384956 97 ntBASIC2.51□□□□□ -2.01
NKX3-2P78367 MIR522-201ENST00000385071 87 ntBASIC2.51□□□□□ -2.01
NKX3-2P78367 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.51□□□□□ -2.01
NKX3-2P78367 CST2P1-201ENST00000425770 87 ntBASIC2.51□□□□□ -2.01
NKX3-2P78367 AL606517.2-201ENST00000442855 241 ntBASIC2.51□□□□□ -2.01
NKX3-2P78367 Y_RNA.651-201ENST00000459380 103 ntBASIC2.51□□□□□ -2.01
NKX3-2P78367 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC2.51□□□□□ -2.01
NKX3-2P78367 RNA5SP82-201ENST00000516707 92 ntBASIC2.51□□□□□ -2.01
NKX3-2P78367 MTND5P34-201ENST00000568888 325 ntBASIC2.51□□□□□ -2.01
NKX3-2P78367 MIR3169-201ENST00000578032 83 ntBASIC2.51□□□□□ -2.01
NKX3-2P78367 AC108081.1-201ENST00000604358 221 ntBASIC2.51□□□□□ -2.01
NKX3-2P78367 U4atac.1-201ENST00000618345 95 ntBASIC2.51□□□□□ -2.01
NKX3-2P78367 AC022513.1-201ENST00000624512 117 ntBASIC2.51□□□□□ -2.01
NKX3-2P78367 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.51□□□□□ -2.01
NKX3-2P78367 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
NKX3-2P78367 MIR21-201ENST00000362134 72 ntBASIC2.5□□□□□ -2.01
NKX3-2P78367 SNORD115-3-201ENST00000363100 82 ntBASIC2.5□□□□□ -2.01
NKX3-2P78367 MIR221-201ENST00000385135 110 ntBASIC2.5□□□□□ -2.01
NKX3-2P78367 RNY4P18-201ENST00000391107 89 ntBASIC2.5□□□□□ -2.01
NKX3-2P78367 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC2.5□□□□□ -2.01
NKX3-2P78367 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
NKX3-2P78367 HMGN2P23-201ENST00000456759 269 ntBASIC2.5□□□□□ -2.01
NKX3-2P78367 SNORD33.1-201ENST00000516213 88 ntBASIC2.5□□□□□ -2.01
NKX3-2P78367 RNU6-781P-201ENST00000516377 101 ntBASIC2.5□□□□□ -2.01
NKX3-2P78367 AP002004.2-201ENST00000531656 154 ntBASIC2.5□□□□□ -2.01
NKX3-2P78367 AC022217.4-201ENST00000604389 163 ntBASIC2.5□□□□□ -2.01
NKX3-2P78367 AL022345.2-201ENST00000606307 135 ntBASIC2.5□□□□□ -2.01
NKX3-2P78367 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2.5□□□□□ -2.01
NKX3-2P78367 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
NKX3-2P78367 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC2.49□□□□□ -2.01
NKX3-2P78367 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.49□□□□□ -2.01
NKX3-2P78367 MIR6073-201ENST00000352083 89 ntBASIC2.49□□□□□ -2.01
NKX3-2P78367 RNU6-888P-201ENST00000363010 101 ntBASIC2.49□□□□□ -2.01
NKX3-2P78367 DEFA7P-201ENST00000382676 285 ntBASIC2.49□□□□□ -2.01
NKX3-2P78367 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.49□□□□□ -2.01
NKX3-2P78367 Y_RNA.617-201ENST00000410920 90 ntBASIC2.49□□□□□ -2.01
NKX3-2P78367 FTH1P12-201ENST00000432137 551 ntBASIC2.49□□□□□ -2.01
NKX3-2P78367 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC2.49□□□□□ -2.01
NKX3-2P78367 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.49□□□□□ -2.01
NKX3-2P78367 RNU6-693P-201ENST00000516134 107 ntBASIC2.49□□□□□ -2.01
NKX3-2P78367 SCARNA16.3-201ENST00000516595 184 ntBASIC2.49□□□□□ -2.01
NKX3-2P78367 AC024995.1-201ENST00000523014 93 ntBASIC2.49□□□□□ -2.01
NKX3-2P78367 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.49□□□□□ -2.01
NKX3-2P78367 MIR4658-201ENST00000584344 65 ntBASIC2.49□□□□□ -2.01
NKX3-2P78367 AC009831.4-201ENST00000620744 325 ntBASIC2.49□□□□□ -2.01
NKX3-2P78367 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.49□□□□□ -2.01
NKX3-2P78367 SNORD68-201ENST00000363214 84 ntBASIC2.48□□□□□ -2.01
NKX3-2P78367 RNU6-23P-201ENST00000363283 107 ntBASIC2.48□□□□□ -2.01
NKX3-2P78367 SNORD58C-201ENST00000365223 64 ntBASIC2.48□□□□□ -2.01
NKX3-2P78367 SNORD24-201ENST00000383884 75 ntBASIC2.48□□□□□ -2.01
NKX3-2P78367 MIR515-2-201ENST00000384883 83 ntBASIC2.48□□□□□ -2.01
NKX3-2P78367 MIR515-1-201ENST00000384884 83 ntBASIC2.48□□□□□ -2.01
NKX3-2P78367 U8.13-201ENST00000390842 128 ntBASIC2.48□□□□□ -2.01
NKX3-2P78367 RNA5SP236-201ENST00000516169 116 ntBASIC2.48□□□□□ -2.01
NKX3-2P78367 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.48□□□□□ -2.01
NKX3-2P78367 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
NKX3-2P78367 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
NKX3-2P78367 MIR518F-201ENST00000384973 87 ntBASIC2.47□□□□□ -2.01
NKX3-2P78367 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
NKX3-2P78367 SNORD77.3-201ENST00000391113 65 ntBASIC2.47□□□□□ -2.01
NKX3-2P78367 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.47□□□□□ -2.01
NKX3-2P78367 AF228730.3-201ENST00000436691 102 ntBASIC2.47□□□□□ -2.01
NKX3-2P78367 SNRPGP13-201ENST00000442212 177 ntBASIC2.47□□□□□ -2.01
NKX3-2P78367 RNU7-94P-201ENST00000459576 63 ntBASIC2.47□□□□□ -2.01
NKX3-2P78367 PDCD5P2-201ENST00000507570 312 ntBASIC2.47□□□□□ -2.01
NKX3-2P78367 IGHVIII-67-2-201ENST00000519849 88 ntBASIC2.47□□□□□ -2.01
NKX3-2P78367 MIR376A2-201ENST00000636782 80 ntBASIC2.47□□□□□ -2.01
NKX3-2P78367 U6.95-201ENST00000636931 70 ntBASIC2.47□□□□□ -2.01
NKX3-2P78367 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.46□□□□□ -2.02
NKX3-2P78367 RNU6-647P-201ENST00000364243 107 ntBASIC2.46□□□□□ -2.02
NKX3-2P78367 RNU6-1292P-201ENST00000383856 107 ntBASIC2.46□□□□□ -2.02
NKX3-2P78367 SNORA67.3-201ENST00000384366 140 ntBASIC2.46□□□□□ -2.02
NKX3-2P78367 SNORA48.3-201ENST00000391081 134 ntBASIC2.46□□□□□ -2.02
NKX3-2P78367 SNORA26.9-201ENST00000391322 122 ntBASIC2.46□□□□□ -2.02
NKX3-2P78367 AL023284.1-201ENST00000403956 276 ntBASIC2.46□□□□□ -2.02
NKX3-2P78367 RNA5SP181-201ENST00000410246 98 ntBASIC2.46□□□□□ -2.02
NKX3-2P78367 AL445646.1-201ENST00000431784 216 ntBASIC2.46□□□□□ -2.02
NKX3-2P78367 Y_RNA.709-201ENST00000516952 92 ntBASIC2.46□□□□□ -2.02
NKX3-2P78367 IGKV1-22-201ENST00000524313 326 ntBASIC2.46□□□□□ -2.02
NKX3-2P78367 CYCSP26-201ENST00000534107 320 ntBASIC2.46□□□□□ -2.02
NKX3-2P78367 AC087685.1-201ENST00000587507 141 ntBASIC2.46□□□□□ -2.02
NKX3-2P78367 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.46□□□□□ -2.02
NKX3-2P78367 RNA5SP109-201ENST00000391010 116 ntBASIC2.45□□□□□ -2.02
NKX3-2P78367 RPL23AP42-201ENST00000471152 471 ntBASIC2.45□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 125.1 ms