Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 MTND2P18-201ENST00000419962 1030 ntBASIC-1.4□□□□□ -2.63
UBA52P62987 MTATP6P17-201ENST00000431030 672 ntBASIC-1.4□□□□□ -2.63
UBA52P62987 SNORA13-201ENST00000458790 133 ntBASIC-1.4□□□□□ -2.63
UBA52P62987 RNA5SP484-201ENST00000458857 111 ntBASIC-1.4□□□□□ -2.63
UBA52P62987 RNU6-274P-201ENST00000459566 107 ntBASIC-1.4□□□□□ -2.63
UBA52P62987 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-1.4□□□□□ -2.63
UBA52P62987 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC-1.4□□□□□ -2.63
UBA52P62987 Y_RNA.683-201ENST00000516508 93 ntBASIC-1.4□□□□□ -2.63
UBA52P62987 MIR4499-201ENST00000584834 69 ntBASIC-1.4□□□□□ -2.63
UBA52P62987 AC005771.1-201ENST00000585581 349 ntBASIC-1.4□□□□□ -2.63
UBA52P62987 RNU6-86P-201ENST00000606534 107 ntBASIC-1.4□□□□□ -2.63
UBA52P62987 uc_338.19-201ENST00000616808 99 ntBASIC-1.4□□□□□ -2.63
UBA52P62987 AL049777.1-201ENST00000622740 518 ntBASIC-1.4□□□□□ -2.63
UBA52P62987 AC099654.13-201ENST00000639774 207 ntBASIC-1.4□□□□□ -2.63
UBA52P62987 RNY1P12-201ENST00000364251 105 ntBASIC-1.41□□□□□ -2.64
UBA52P62987 RNU6-454P-201ENST00000364292 107 ntBASIC-1.41□□□□□ -2.64
UBA52P62987 RNU6-865P-201ENST00000364772 107 ntBASIC-1.41□□□□□ -2.64
UBA52P62987 GMFBP1-201ENST00000467831 427 ntBASIC-1.41□□□□□ -2.64
UBA52P62987 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC-1.41□□□□□ -2.64
UBA52P62987 SNORD38.3-201ENST00000516599 73 ntBASIC-1.41□□□□□ -2.64
UBA52P62987 RNU6-410P-201ENST00000517006 107 ntBASIC-1.41□□□□□ -2.64
UBA52P62987 RNU6-158P-201ENST00000517104 100 ntBASIC-1.41□□□□□ -2.64
UBA52P62987 AC005972.2-201ENST00000604690 348 ntBASIC-1.41□□□□□ -2.64
UBA52P62987 AL391834.2-201ENST00000609982 546 ntBASIC-1.41□□□□□ -2.64
UBA52P62987 uc_338.11-201ENST00000619132 160 ntBASIC-1.41□□□□□ -2.64
UBA52P62987 AC007671.2-201ENST00000637344 619 ntBASIC-1.41□□□□□ -2.64
UBA52P62987 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC-1.42□□□□□ -2.64
UBA52P62987 MIR410-201ENST00000362222 80 ntBASIC-1.42□□□□□ -2.64
UBA52P62987 RNU6-502P-201ENST00000362419 108 ntBASIC-1.42□□□□□ -2.64
UBA52P62987 SNORD116-12-201ENST00000384468 92 ntBASIC-1.42□□□□□ -2.64
UBA52P62987 RNU6ATAC42P-201ENST00000408637 95 ntBASIC-1.42□□□□□ -2.64
UBA52P62987 AC104850.1-201ENST00000435940 476 ntBASIC-1.42□□□□□ -2.64
UBA52P62987 AC244505.6-201ENST00000452829 130 ntBASIC-1.42□□□□□ -2.64
UBA52P62987 RNU7-67P-201ENST00000459003 62 ntBASIC-1.42□□□□□ -2.64
UBA52P62987 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC-1.42□□□□□ -2.64
UBA52P62987 Y_RNA.672-201ENST00000516289 104 ntBASIC-1.42□□□□□ -2.64
UBA52P62987 RNU6-175P-201ENST00000516896 107 ntBASIC-1.42□□□□□ -2.64
UBA52P62987 AC104576.1-201ENST00000524225 88 ntBASIC-1.42□□□□□ -2.64
UBA52P62987 RNA5SP403-201ENST00000363598 108 ntBASIC-1.43□□□□□ -2.64
UBA52P62987 Y_RNA.243-201ENST00000364481 109 ntBASIC-1.43□□□□□ -2.64
UBA52P62987 SNORA72.6-201ENST00000384520 129 ntBASIC-1.43□□□□□ -2.64
UBA52P62987 RNU6-606P-201ENST00000384721 111 ntBASIC-1.43□□□□□ -2.64
UBA52P62987 RNU6-325P-201ENST00000411132 105 ntBASIC-1.43□□□□□ -2.64
UBA52P62987 RPL30P16-201ENST00000419341 429 ntBASIC-1.43□□□□□ -2.64
UBA52P62987 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC-1.43□□□□□ -2.64
UBA52P62987 MTND3P1-201ENST00000441336 220 ntBASIC-1.43□□□□□ -2.64
UBA52P62987 U8.19-201ENST00000459095 133 ntBASIC-1.43□□□□□ -2.64
UBA52P62987 U8.22-201ENST00000459141 133 ntBASIC-1.43□□□□□ -2.64
UBA52P62987 RNU7-104P-201ENST00000459398 79 ntBASIC-1.43□□□□□ -2.64
UBA52P62987 RNU6-751P-201ENST00000516382 101 ntBASIC-1.43□□□□□ -2.64
UBA52P62987 MIR4423-201ENST00000580922 80 ntBASIC-1.43□□□□□ -2.64
UBA52P62987 CLPTM1LP1-201ENST00000604519 484 ntBASIC-1.43□□□□□ -2.64
UBA52P62987 AP001282.2-201ENST00000616149 309 ntBASIC-1.43□□□□□ -2.64
UBA52P62987 SNORD115-44-201ENST00000365391 82 ntBASIC-1.44□□□□□ -2.64
UBA52P62987 RNU6-1329P-201ENST00000365664 107 ntBASIC-1.44□□□□□ -2.64
UBA52P62987 MIR521-1-201ENST00000384902 87 ntBASIC-1.44□□□□□ -2.64
UBA52P62987 MIRLET7F2-201ENST00000385277 83 ntBASIC-1.44□□□□□ -2.64
UBA52P62987 USP9YP30-201ENST00000430729 455 ntBASIC-1.44□□□□□ -2.64
UBA52P62987 RNU6-958P-201ENST00000516995 106 ntBASIC-1.44□□□□□ -2.64
UBA52P62987 MIR5583-1-201ENST00000580941 59 ntBASIC-1.44□□□□□ -2.64
UBA52P62987 AC011373.1-201ENST00000607270 237 ntBASIC-1.44□□□□□ -2.64
UBA52P62987 AC109347.2-201ENST00000610220 349 ntBASIC-1.44□□□□□ -2.64
UBA52P62987 AL662814.1-201ENST00000617364 121 ntBASIC-1.44□□□□□ -2.64
UBA52P62987 Y_RNA.450-201ENST00000384198 113 ntBASIC-1.45□□□□□ -2.64
UBA52P62987 AL590002.1-201ENST00000406554 418 ntBASIC-1.45□□□□□ -2.64
UBA52P62987 RNU2-29P-201ENST00000410423 189 ntBASIC-1.45□□□□□ -2.64
UBA52P62987 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC-1.45□□□□□ -2.64
UBA52P62987 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC-1.45□□□□□ -2.64
UBA52P62987 Y_RNA.637-201ENST00000459424 114 ntBASIC-1.45□□□□□ -2.64
UBA52P62987 RNU6-966P-201ENST00000516479 104 ntBASIC-1.45□□□□□ -2.64
UBA52P62987 SNORA25.16-201ENST00000516741 121 ntBASIC-1.45□□□□□ -2.64
UBA52P62987 U2.17-201ENST00000611454 95 ntBASIC-1.45□□□□□ -2.64
UBA52P62987 AL158063.1-201ENST00000615349 536 ntBASIC-1.45□□□□□ -2.64
UBA52P62987 SNORD115-34-201ENST00000362441 82 ntBASIC-1.46□□□□□ -2.64
UBA52P62987 SNORD115-12-201ENST00000362583 82 ntBASIC-1.46□□□□□ -2.64
UBA52P62987 SNORD115-29-201ENST00000362834 82 ntBASIC-1.46□□□□□ -2.64
UBA52P62987 SNORD115-9-201ENST00000362912 82 ntBASIC-1.46□□□□□ -2.64
UBA52P62987 SNORD115-21-201ENST00000362963 81 ntBASIC-1.46□□□□□ -2.64
UBA52P62987 SNORD115-14-201ENST00000363090 81 ntBASIC-1.46□□□□□ -2.64
UBA52P62987 SNORD115-13-201ENST00000363358 82 ntBASIC-1.46□□□□□ -2.64
UBA52P62987 SNORD115-11-201ENST00000363616 82 ntBASIC-1.46□□□□□ -2.64
UBA52P62987 SNORD115-5-201ENST00000363633 82 ntBASIC-1.46□□□□□ -2.64
UBA52P62987 SNORD115-39-201ENST00000363694 82 ntBASIC-1.46□□□□□ -2.64
UBA52P62987 Y_RNA.172-201ENST00000363765 102 ntBASIC-1.46□□□□□ -2.64
UBA52P62987 SNORD115-4-201ENST00000363810 82 ntBASIC-1.46□□□□□ -2.64
UBA52P62987 SNORD115-16-201ENST00000363887 82 ntBASIC-1.46□□□□□ -2.64
UBA52P62987 SNORD115-6-201ENST00000363942 82 ntBASIC-1.46□□□□□ -2.64
UBA52P62987 SNORD115-42-201ENST00000364273 82 ntBASIC-1.46□□□□□ -2.64
UBA52P62987 RNU4-75P-201ENST00000364621 146 ntBASIC-1.46□□□□□ -2.64
UBA52P62987 SNORD115-15-201ENST00000364809 81 ntBASIC-1.46□□□□□ -2.64
UBA52P62987 SNORD115-1-201ENST00000364961 82 ntBASIC-1.46□□□□□ -2.64
UBA52P62987 SNORD115-26-201ENST00000365067 82 ntBASIC-1.46□□□□□ -2.64
UBA52P62987 SNORD115-10-201ENST00000365073 81 ntBASIC-1.46□□□□□ -2.64
UBA52P62987 SNORD115-43-201ENST00000365503 82 ntBASIC-1.46□□□□□ -2.64
UBA52P62987 SNORD115-36-201ENST00000365629 82 ntBASIC-1.46□□□□□ -2.64
UBA52P62987 RNU6-900P-201ENST00000384498 102 ntBASIC-1.46□□□□□ -2.64
UBA52P62987 RNU6-541P-201ENST00000384709 110 ntBASIC-1.46□□□□□ -2.64
UBA52P62987 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC-1.46□□□□□ -2.64
UBA52P62987 DLGAP5P1-201ENST00000430307 464 ntBASIC-1.46□□□□□ -2.64
UBA52P62987 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC-1.46□□□□□ -2.64
Retrieved 100 of 98,524 protein–RNA pairs in 131.1 ms