Protein–RNA interactions for Protein: P62684

HERVK_113, Endogenous retrovirus group K member 113 Gag polyprotein, humanhuman

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERVK_113P62684 AC084364.2-201ENST00000546924 395 ntBASIC2.41□□□□□ -2.02
HERVK_113P62684 MIR5002-201ENST00000584713 97 ntBASIC2.41□□□□□ -2.02
HERVK_113P62684 AP000553.5-201ENST00000641933 54 ntBASIC2.41□□□□□ -2.02
HERVK_113P62684 ZNF355P-201ENST00000427301 3216 ntBASIC2.4□□□□□ -2.02
HERVK_113P62684 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.4□□□□□ -2.03
HERVK_113P62684 MIR522-201ENST00000385071 87 ntBASIC2.4□□□□□ -2.03
HERVK_113P62684 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
HERVK_113P62684 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.4□□□□□ -2.03
HERVK_113P62684 RNA5SP270-201ENST00000411361 118 ntBASIC2.4□□□□□ -2.03
HERVK_113P62684 RNU6-62P-201ENST00000516526 102 ntBASIC2.4□□□□□ -2.03
HERVK_113P62684 AC008507.4-201ENST00000585464 127 ntBASIC2.4□□□□□ -2.03
HERVK_113P62684 AC011603.4-201ENST00000611325 277 ntBASIC2.4□□□□□ -2.03
HERVK_113P62684 RNU6-1084P-201ENST00000362498 107 ntBASIC2.39□□□□□ -2.03
HERVK_113P62684 RNU6-1019P-201ENST00000364424 107 ntBASIC2.39□□□□□ -2.03
HERVK_113P62684 RNU6-1081P-201ENST00000384537 107 ntBASIC2.39□□□□□ -2.03
HERVK_113P62684 MIR518A2-201ENST00000384966 87 ntBASIC2.39□□□□□ -2.03
HERVK_113P62684 Y_RNA.584-201ENST00000391090 114 ntBASIC2.39□□□□□ -2.03
HERVK_113P62684 RNA5SP338-201ENST00000410495 85 ntBASIC2.39□□□□□ -2.03
HERVK_113P62684 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC2.39□□□□□ -2.03
HERVK_113P62684 AP001328.1-201ENST00000528550 176 ntBASIC2.39□□□□□ -2.03
HERVK_113P62684 AC097639.2-201ENST00000603159 172 ntBASIC2.39□□□□□ -2.03
HERVK_113P62684 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
HERVK_113P62684 MIR1283-2-201ENST00000408621 87 ntBASIC2.38□□□□□ -2.03
HERVK_113P62684 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC2.38□□□□□ -2.03
HERVK_113P62684 FTH1P12-201ENST00000432137 551 ntBASIC2.38□□□□□ -2.03
HERVK_113P62684 STAG3L5P-204ENST00000443759 179 ntBASIC2.38□□□□□ -2.03
HERVK_113P62684 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.38□□□□□ -2.03
HERVK_113P62684 RNU6-504P-201ENST00000516568 104 ntBASIC2.38□□□□□ -2.03
HERVK_113P62684 RNU6-1270P-201ENST00000517128 108 ntBASIC2.38□□□□□ -2.03
HERVK_113P62684 Y_RNA.783-201ENST00000613546 102 ntBASIC2.38□□□□□ -2.03
HERVK_113P62684 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2.38□□□□□ -2.03
HERVK_113P62684 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
HERVK_113P62684 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
HERVK_113P62684 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
HERVK_113P62684 RNU6-915P-201ENST00000364943 103 ntBASIC2.37□□□□□ -2.03
HERVK_113P62684 RNU6-22P-201ENST00000384355 107 ntBASIC2.37□□□□□ -2.03
HERVK_113P62684 RNU6-440P-201ENST00000390882 105 ntBASIC2.37□□□□□ -2.03
HERVK_113P62684 HMGN2P39-201ENST00000398005 273 ntBASIC2.37□□□□□ -2.03
HERVK_113P62684 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.37□□□□□ -2.03
HERVK_113P62684 Y_RNA.666-201ENST00000516187 112 ntBASIC2.37□□□□□ -2.03
HERVK_113P62684 SNORA18.4-201ENST00000516440 124 ntBASIC2.37□□□□□ -2.03
HERVK_113P62684 RNA5SP82-201ENST00000516707 92 ntBASIC2.37□□□□□ -2.03
HERVK_113P62684 RNU7-193P-201ENST00000516723 65 ntBASIC2.37□□□□□ -2.03
HERVK_113P62684 AC087685.1-201ENST00000587507 141 ntBASIC2.37□□□□□ -2.03
HERVK_113P62684 TUG1_4.1-201ENST00000619464 181 ntBASIC2.37□□□□□ -2.03
HERVK_113P62684 MIR8054-201ENST00000620877 86 ntBASIC2.37□□□□□ -2.03
HERVK_113P62684 AC080100.1-201ENST00000624239 5356 ntBASIC2.37□□□□□ -2.03
HERVK_113P62684 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.36□□□□□ -2.03
HERVK_113P62684 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
HERVK_113P62684 Y_RNA.251-201ENST00000364551 99 ntBASIC2.36□□□□□ -2.03
HERVK_113P62684 SNORD50B-201ENST00000364995 70 ntBASIC2.36□□□□□ -2.03
HERVK_113P62684 MIR583-201ENST00000384846 75 ntBASIC2.36□□□□□ -2.03
HERVK_113P62684 RNA5SP465-201ENST00000391195 109 ntBASIC2.36□□□□□ -2.03
HERVK_113P62684 RNA5SP482-201ENST00000391269 118 ntBASIC2.36□□□□□ -2.03
HERVK_113P62684 AC019129.1-201ENST00000403786 261 ntBASIC2.36□□□□□ -2.03
HERVK_113P62684 AC011753.1-201ENST00000451001 220 ntBASIC2.36□□□□□ -2.03
HERVK_113P62684 RNU6-717P-201ENST00000459076 104 ntBASIC2.36□□□□□ -2.03
HERVK_113P62684 RNVU1-2-201ENST00000516326 135 ntBASIC2.36□□□□□ -2.03
HERVK_113P62684 Y_RNA.676-201ENST00000516393 96 ntBASIC2.36□□□□□ -2.03
HERVK_113P62684 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.36□□□□□ -2.03
HERVK_113P62684 AL365222.1-201ENST00000614661 98 ntBASIC2.36□□□□□ -2.03
HERVK_113P62684 Y_RNA.66-201ENST00000362862 102 ntBASIC2.35□□□□□ -2.03
HERVK_113P62684 RNU1-17P-201ENST00000363022 152 ntBASIC2.35□□□□□ -2.03
HERVK_113P62684 SNORD14E-201ENST00000364009 85 ntBASIC2.35□□□□□ -2.03
HERVK_113P62684 Y_RNA.242-201ENST00000364473 110 ntBASIC2.35□□□□□ -2.03
HERVK_113P62684 MIR539-201ENST00000365690 78 ntBASIC2.35□□□□□ -2.03
HERVK_113P62684 RNU6-1154P-201ENST00000391001 104 ntBASIC2.35□□□□□ -2.03
HERVK_113P62684 SNORD23.1-201ENST00000408212 104 ntBASIC2.35□□□□□ -2.03
HERVK_113P62684 RNU2-51P-201ENST00000410708 197 ntBASIC2.35□□□□□ -2.03
HERVK_113P62684 RNU2-7P-201ENST00000410794 178 ntBASIC2.35□□□□□ -2.03
HERVK_113P62684 RNU6-313P-201ENST00000516317 112 ntBASIC2.35□□□□□ -2.03
HERVK_113P62684 MIR3129-201ENST00000581095 76 ntBASIC2.35□□□□□ -2.03
HERVK_113P62684 AP000942.3-201ENST00000603702 160 ntBASIC2.35□□□□□ -2.03
HERVK_113P62684 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC2.34□□□□□ -2.03
HERVK_113P62684 Y_RNA.140-201ENST00000363474 103 ntBASIC2.34□□□□□ -2.03
HERVK_113P62684 snoU2-30.1-201ENST00000365012 70 ntBASIC2.34□□□□□ -2.03
HERVK_113P62684 SNORD61-201ENST00000384252 73 ntBASIC2.34□□□□□ -2.03
HERVK_113P62684 AC069257.2-201ENST00000441819 155 ntBASIC2.34□□□□□ -2.03
HERVK_113P62684 RNU6-693P-201ENST00000516134 107 ntBASIC2.34□□□□□ -2.03
HERVK_113P62684 RNU7-28P-201ENST00000516759 62 ntBASIC2.34□□□□□ -2.03
HERVK_113P62684 RNU6-1234P-201ENST00000516877 103 ntBASIC2.34□□□□□ -2.03
HERVK_113P62684 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
HERVK_113P62684 AC007751.1-201ENST00000529260 376 ntBASIC2.34□□□□□ -2.03
HERVK_113P62684 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC2.34□□□□□ -2.03
HERVK_113P62684 MIR203B-201ENST00000636080 86 ntBASIC2.34□□□□□ -2.03
HERVK_113P62684 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.34□□□□□ -2.04
HERVK_113P62684 U8.1-201ENST00000362843 134 ntBASIC2.33□□□□□ -2.04
HERVK_113P62684 RNA5SP160-201ENST00000364866 120 ntBASIC2.33□□□□□ -2.04
HERVK_113P62684 RNU6-442P-201ENST00000383968 104 ntBASIC2.33□□□□□ -2.04
HERVK_113P62684 SNORA1-201ENST00000384107 130 ntBASIC2.33□□□□□ -2.04
HERVK_113P62684 AL021397.1-201ENST00000451806 248 ntBASIC2.33□□□□□ -2.04
HERVK_113P62684 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.33□□□□□ -2.04
HERVK_113P62684 AC090255.1-201ENST00000495779 349 ntBASIC2.33□□□□□ -2.04
HERVK_113P62684 RNA5SP182-201ENST00000516064 82 ntBASIC2.33□□□□□ -2.04
HERVK_113P62684 SNORD45.4-201ENST00000516629 73 ntBASIC2.33□□□□□ -2.04
HERVK_113P62684 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC2.33□□□□□ -2.04
HERVK_113P62684 AC131055.1-201ENST00000584626 316 ntBASIC2.33□□□□□ -2.04
HERVK_113P62684 U7.2-201ENST00000607576 63 ntBASIC2.33□□□□□ -2.04
HERVK_113P62684 AP001340.1-201ENST00000624405 217 ntBASIC2.33□□□□□ -2.04
HERVK_113P62684 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 119.4 ms