Protein–RNA interactions for Protein: P57078

RIPK4, Receptor-interacting serine/threonine-protein kinase 4, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4P57078 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
RIPK4P57078 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
RIPK4P57078 SNORA25.1-201ENST00000362326 128 ntBASIC1.18□□□□□ -2.22
RIPK4P57078 SNORD27-201ENST00000363981 72 ntBASIC1.18□□□□□ -2.22
RIPK4P57078 RNU4-10P-201ENST00000364383 140 ntBASIC1.18□□□□□ -2.22
RIPK4P57078 Y_RNA.350-201ENST00000365409 98 ntBASIC1.18□□□□□ -2.22
RIPK4P57078 SNORA72.4-201ENST00000384174 132 ntBASIC1.18□□□□□ -2.22
RIPK4P57078 RNU6-376P-201ENST00000384731 106 ntBASIC1.18□□□□□ -2.22
RIPK4P57078 Y_RNA.572-201ENST00000384757 98 ntBASIC1.18□□□□□ -2.22
RIPK4P57078 RNA5SP323-201ENST00000391094 133 ntBASIC1.18□□□□□ -2.22
RIPK4P57078 SNORA53-201ENST00000391141 249 ntBASIC1.18□□□□□ -2.22
RIPK4P57078 MTCO2P33-201ENST00000402100 465 ntBASIC1.18□□□□□ -2.22
RIPK4P57078 MIR1278-201ENST00000408753 81 ntBASIC1.18□□□□□ -2.22
RIPK4P57078 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC1.18□□□□□ -2.22
RIPK4P57078 RPL39P38-201ENST00000467018 153 ntBASIC1.18□□□□□ -2.22
RIPK4P57078 SNORD116-28-201ENST00000516123 91 ntBASIC1.18□□□□□ -2.22
RIPK4P57078 RNU6-1096P-201ENST00000517089 102 ntBASIC1.18□□□□□ -2.22
RIPK4P57078 RNU6-111P-201ENST00000517179 105 ntBASIC1.18□□□□□ -2.22
RIPK4P57078 AC024405.2-202ENST00000532731 184 ntBASIC1.18□□□□□ -2.22
RIPK4P57078 AC004817.2-201ENST00000561794 651 ntBASIC1.18□□□□□ -2.22
RIPK4P57078 MIR4698-201ENST00000577795 80 ntBASIC1.18□□□□□ -2.22
RIPK4P57078 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.18□□□□□ -2.22
RIPK4P57078 AL512605.2-201ENST00000592972 256 ntBASIC1.18□□□□□ -2.22
RIPK4P57078 U2.14-201ENST00000615943 113 ntBASIC1.18□□□□□ -2.22
RIPK4P57078 MIR6734-201ENST00000621166 68 ntBASIC1.18□□□□□ -2.22
RIPK4P57078 RNU6-1123P-201ENST00000362347 106 ntBASIC1.17□□□□□ -2.22
RIPK4P57078 SNORA1B-201ENST00000362535 133 ntBASIC1.17□□□□□ -2.22
RIPK4P57078 Y_RNA.54-201ENST00000362766 105 ntBASIC1.17□□□□□ -2.22
RIPK4P57078 RNU6-1272P-201ENST00000362776 107 ntBASIC1.17□□□□□ -2.22
RIPK4P57078 Y_RNA.267-201ENST00000364679 109 ntBASIC1.17□□□□□ -2.22
RIPK4P57078 Y_RNA.416-201ENST00000384014 113 ntBASIC1.17□□□□□ -2.22
RIPK4P57078 RNU6-211P-201ENST00000384047 107 ntBASIC1.17□□□□□ -2.22
RIPK4P57078 RNU6-42P-201ENST00000384165 107 ntBASIC1.17□□□□□ -2.22
RIPK4P57078 MIR618-201ENST00000385287 98 ntBASIC1.17□□□□□ -2.22
RIPK4P57078 SNORD58.1-201ENST00000391313 66 ntBASIC1.17□□□□□ -2.22
RIPK4P57078 RNU6-710P-201ENST00000410424 105 ntBASIC1.17□□□□□ -2.22
RIPK4P57078 BTF3P11-201ENST00000426582 477 ntBASIC1.17□□□□□ -2.22
RIPK4P57078 Z98949.2-201ENST00000440996 144 ntBASIC1.17□□□□□ -2.22
RIPK4P57078 RPL30P7-201ENST00000479312 323 ntBASIC1.17□□□□□ -2.22
RIPK4P57078 RNU7-115P-201ENST00000516433 55 ntBASIC1.17□□□□□ -2.22
RIPK4P57078 AC019176.1-201ENST00000518519 225 ntBASIC1.17□□□□□ -2.22
RIPK4P57078 MIR4282-201ENST00000583613 67 ntBASIC1.17□□□□□ -2.22
RIPK4P57078 FAM106DP-201ENST00000586416 501 ntBASIC1.17□□□□□ -2.22
RIPK4P57078 POLR3GP1-201ENST00000594073 261 ntBASIC1.17□□□□□ -2.22
RIPK4P57078 AP003357.1-201ENST00000604497 148 ntBASIC1.17□□□□□ -2.22
RIPK4P57078 MIR6857-201ENST00000613267 93 ntBASIC1.17□□□□□ -2.22
RIPK4P57078 MIR8054-201ENST00000620877 86 ntBASIC1.17□□□□□ -2.22
RIPK4P57078 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
RIPK4P57078 Y_RNA.20-201ENST00000362479 113 ntBASIC1.16□□□□□ -2.22
RIPK4P57078 Y_RNA.65-201ENST00000362846 100 ntBASIC1.16□□□□□ -2.22
RIPK4P57078 RNU6-379P-201ENST00000363813 104 ntBASIC1.16□□□□□ -2.22
RIPK4P57078 SNORA25.8-201ENST00000364831 128 ntBASIC1.16□□□□□ -2.22
RIPK4P57078 Y_RNA.352-201ENST00000365439 102 ntBASIC1.16□□□□□ -2.22
RIPK4P57078 RNU6-1323P-201ENST00000384025 107 ntBASIC1.16□□□□□ -2.22
RIPK4P57078 RNU6-440P-201ENST00000390882 105 ntBASIC1.16□□□□□ -2.22
RIPK4P57078 RNU6-383P-201ENST00000410864 94 ntBASIC1.16□□□□□ -2.22
RIPK4P57078 AC233266.1-201ENST00000454518 96 ntBASIC1.16□□□□□ -2.22
RIPK4P57078 SNORD2.1-201ENST00000458762 69 ntBASIC1.16□□□□□ -2.22
RIPK4P57078 RNU6-1278P-201ENST00000516130 107 ntBASIC1.16□□□□□ -2.22
RIPK4P57078 RNY3P16-201ENST00000516338 101 ntBASIC1.16□□□□□ -2.22
RIPK4P57078 AC011604.1-201ENST00000545978 196 ntBASIC1.16□□□□□ -2.22
RIPK4P57078 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC1.16□□□□□ -2.22
RIPK4P57078 AC242852.1-201ENST00000612151 96 ntBASIC1.16□□□□□ -2.22
RIPK4P57078 AL078604.3-201ENST00000615580 211 ntBASIC1.16□□□□□ -2.22
RIPK4P57078 AC013791.1-201ENST00000616619 62 ntBASIC1.16□□□□□ -2.22
RIPK4P57078 AC244015.1-201ENST00000622301 99 ntBASIC1.16□□□□□ -2.22
RIPK4P57078 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
RIPK4P57078 RNU4-41P-201ENST00000364426 143 ntBASIC1.15□□□□□ -2.23
RIPK4P57078 RNU6-1065P-201ENST00000384513 106 ntBASIC1.15□□□□□ -2.23
RIPK4P57078 RNU6-1031P-201ENST00000384773 107 ntBASIC1.15□□□□□ -2.23
RIPK4P57078 SNORA36B-201ENST00000410438 131 ntBASIC1.15□□□□□ -2.23
RIPK4P57078 AC245047.3-201ENST00000429428 127 ntBASIC1.15□□□□□ -2.23
RIPK4P57078 RNU6-1023P-201ENST00000516137 106 ntBASIC1.15□□□□□ -2.23
RIPK4P57078 RNU6-341P-201ENST00000516973 96 ntBASIC1.15□□□□□ -2.23
RIPK4P57078 MIR5692C2-201ENST00000577959 77 ntBASIC1.15□□□□□ -2.23
RIPK4P57078 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.15□□□□□ -2.23
RIPK4P57078 AC005357.1-201ENST00000588399 301 ntBASIC1.15□□□□□ -2.23
RIPK4P57078 HSPE1P19-201ENST00000603327 295 ntBASIC1.15□□□□□ -2.23
RIPK4P57078 AC021506.2-201ENST00000612354 169 ntBASIC1.15□□□□□ -2.23
RIPK4P57078 MIR548AY-201ENST00000617669 107 ntBASIC1.15□□□□□ -2.23
RIPK4P57078 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.15□□□□□ -2.23
RIPK4P57078 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC1.15□□□□□ -2.23
RIPK4P57078 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.15□□□□□ -2.23
RIPK4P57078 Y_RNA.82-201ENST00000363000 102 ntBASIC1.14□□□□□ -2.23
RIPK4P57078 Y_RNA.92-201ENST00000363043 102 ntBASIC1.14□□□□□ -2.23
RIPK4P57078 Y_RNA.235-201ENST00000364412 102 ntBASIC1.14□□□□□ -2.23
RIPK4P57078 Y_RNA.306-201ENST00000365015 102 ntBASIC1.14□□□□□ -2.23
RIPK4P57078 Y_RNA.312-201ENST00000365089 102 ntBASIC1.14□□□□□ -2.23
RIPK4P57078 Y_RNA.322-201ENST00000365151 102 ntBASIC1.14□□□□□ -2.23
RIPK4P57078 AC024067.1-201ENST00000426199 223 ntBASIC1.14□□□□□ -2.23
RIPK4P57078 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.14□□□□□ -2.23
RIPK4P57078 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.14□□□□□ -2.23
RIPK4P57078 Y_RNA.650-201ENST00000459002 102 ntBASIC1.14□□□□□ -2.23
RIPK4P57078 RNA5SP220-201ENST00000516298 104 ntBASIC1.14□□□□□ -2.23
RIPK4P57078 Y_RNA.777-201ENST00000516982 102 ntBASIC1.14□□□□□ -2.23
RIPK4P57078 RNU6-388P-201ENST00000517012 105 ntBASIC1.14□□□□□ -2.23
RIPK4P57078 RNU6-389P-201ENST00000517048 105 ntBASIC1.14□□□□□ -2.23
RIPK4P57078 RNU6-1271P-201ENST00000517049 105 ntBASIC1.14□□□□□ -2.23
RIPK4P57078 RNU6-1116P-201ENST00000517269 99 ntBASIC1.14□□□□□ -2.23
RIPK4P57078 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC1.14□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 122.4 ms