Protein–RNA interactions for Protein: P56199

ITGA1, Integrin alpha-1, humanhuman

Predictions only

Length 1,179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA1P56199 MIR5092-201ENST00000583139 88 ntBASIC2.45□□□□□ -2.02
ITGA1P56199 MIR5197-201ENST00000583721 112 ntBASIC2.45□□□□□ -2.02
ITGA1P56199 MIR4762-201ENST00000585261 75 ntBASIC2.45□□□□□ -2.02
ITGA1P56199 CTSLP2-204ENST00000629029 392 ntBASIC2.45□□□□□ -2.02
ITGA1P56199 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.45□□□□□ -2.02
ITGA1P56199 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.45□□□□□ -2.02
ITGA1P56199 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
ITGA1P56199 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.44□□□□□ -2.02
ITGA1P56199 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
ITGA1P56199 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
ITGA1P56199 U8.2-201ENST00000363156 134 ntBASIC2.44□□□□□ -2.02
ITGA1P56199 RNU6-23P-201ENST00000363283 107 ntBASIC2.44□□□□□ -2.02
ITGA1P56199 SNORD14E-201ENST00000364009 85 ntBASIC2.44□□□□□ -2.02
ITGA1P56199 U8.5-201ENST00000364528 136 ntBASIC2.44□□□□□ -2.02
ITGA1P56199 RNU6-442P-201ENST00000383968 104 ntBASIC2.44□□□□□ -2.02
ITGA1P56199 MIR27B-201ENST00000385129 97 ntBASIC2.44□□□□□ -2.02
ITGA1P56199 MIR1263-201ENST00000408324 86 ntBASIC2.44□□□□□ -2.02
ITGA1P56199 MIR548O-201ENST00000408583 114 ntBASIC2.44□□□□□ -2.02
ITGA1P56199 AC007064.1-201ENST00000412238 351 ntBASIC2.44□□□□□ -2.02
ITGA1P56199 AC099677.2-201ENST00000436385 175 ntBASIC2.44□□□□□ -2.02
ITGA1P56199 RPS12P2-201ENST00000439728 269 ntBASIC2.44□□□□□ -2.02
ITGA1P56199 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.44□□□□□ -2.02
ITGA1P56199 RNU7-26P-201ENST00000458980 63 ntBASIC2.44□□□□□ -2.02
ITGA1P56199 snoU13.26-201ENST00000459452 105 ntBASIC2.44□□□□□ -2.02
ITGA1P56199 MIR4658-201ENST00000584344 65 ntBASIC2.44□□□□□ -2.02
ITGA1P56199 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC2.44□□□□□ -2.02
ITGA1P56199 AC006441.5-201ENST00000612680 209 ntBASIC2.44□□□□□ -2.02
ITGA1P56199 U4.3-201ENST00000621047 82 ntBASIC2.44□□□□□ -2.02
ITGA1P56199 MIR7843-201ENST00000622274 79 ntBASIC2.44□□□□□ -2.02
ITGA1P56199 MIR376A2-201ENST00000636782 80 ntBASIC2.44□□□□□ -2.02
ITGA1P56199 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.44□□□□□ -2.02
ITGA1P56199 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
ITGA1P56199 MIR504-201ENST00000385065 83 ntBASIC2.43□□□□□ -2.02
ITGA1P56199 MIR4446-201ENST00000578505 67 ntBASIC2.43□□□□□ -2.02
ITGA1P56199 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.43□□□□□ -2.02
ITGA1P56199 FO624990.1-201ENST00000636373 85 ntBASIC2.43□□□□□ -2.02
ITGA1P56199 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.42□□□□□ -2.02
ITGA1P56199 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
ITGA1P56199 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
ITGA1P56199 RNU6-1298P-201ENST00000362456 101 ntBASIC2.42□□□□□ -2.02
ITGA1P56199 RNU6-1084P-201ENST00000362498 107 ntBASIC2.42□□□□□ -2.02
ITGA1P56199 snoU2-30.1-201ENST00000365012 70 ntBASIC2.42□□□□□ -2.02
ITGA1P56199 Y_RNA.410-201ENST00000383992 113 ntBASIC2.42□□□□□ -2.02
ITGA1P56199 RNU1-138P-201ENST00000384093 164 ntBASIC2.42□□□□□ -2.02
ITGA1P56199 RNA5SP181-201ENST00000410246 98 ntBASIC2.42□□□□□ -2.02
ITGA1P56199 AC245047.3-201ENST00000429428 127 ntBASIC2.42□□□□□ -2.02
ITGA1P56199 RNA5SP320-201ENST00000516263 124 ntBASIC2.42□□□□□ -2.02
ITGA1P56199 RNU7-25P-201ENST00000516544 62 ntBASIC2.42□□□□□ -2.02
ITGA1P56199 AC026271.5-201ENST00000577873 130 ntBASIC2.42□□□□□ -2.02
ITGA1P56199 MIR4679-2-201ENST00000578358 77 ntBASIC2.42□□□□□ -2.02
ITGA1P56199 AC134878.1-201ENST00000619901 243 ntBASIC2.42□□□□□ -2.02
ITGA1P56199 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.42□□□□□ -2.02
ITGA1P56199 ZNF658B-202ENST00000615961 3375 ntBASIC2.41□□□□□ -2.02
ITGA1P56199 SNORA67.1-201ENST00000364749 141 ntBASIC2.41□□□□□ -2.02
ITGA1P56199 Y_RNA.528-201ENST00000384575 108 ntBASIC2.41□□□□□ -2.02
ITGA1P56199 RNA5SP482-201ENST00000391269 118 ntBASIC2.41□□□□□ -2.02
ITGA1P56199 SNORA11.4-201ENST00000408823 129 ntBASIC2.41□□□□□ -2.02
ITGA1P56199 RNA5SP136-201ENST00000410906 107 ntBASIC2.41□□□□□ -2.02
ITGA1P56199 CALM2P4-201ENST00000430810 426 ntBASIC2.41□□□□□ -2.02
ITGA1P56199 AL606517.2-201ENST00000442855 241 ntBASIC2.41□□□□□ -2.02
ITGA1P56199 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC2.41□□□□□ -2.02
ITGA1P56199 AL137067.1-201ENST00000615933 120 ntBASIC2.41□□□□□ -2.02
ITGA1P56199 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.41□□□□□ -2.02
ITGA1P56199 AC022513.1-201ENST00000624512 117 ntBASIC2.41□□□□□ -2.02
ITGA1P56199 AC245060.5-201ENST00000610778 3293 ntBASIC2.41□□□□□ -2.02
ITGA1P56199 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.02
ITGA1P56199 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.4□□□□□ -2.02
ITGA1P56199 AC008555.8-201ENST00000623602 2168 ntBASIC2.4□□□□□ -2.02
ITGA1P56199 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.4□□□□□ -2.02
ITGA1P56199 SNORD115-3-201ENST00000363100 82 ntBASIC2.4□□□□□ -2.03
ITGA1P56199 SNORD115-28-201ENST00000363931 81 ntBASIC2.4□□□□□ -2.03
ITGA1P56199 RNU6-268P-201ENST00000364174 107 ntBASIC2.4□□□□□ -2.03
ITGA1P56199 Y_RNA.366-201ENST00000365540 102 ntBASIC2.4□□□□□ -2.03
ITGA1P56199 SNORA3.2-201ENST00000408221 125 ntBASIC2.4□□□□□ -2.03
ITGA1P56199 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.4□□□□□ -2.03
ITGA1P56199 SNRPGP14-201ENST00000435400 219 ntBASIC2.4□□□□□ -2.03
ITGA1P56199 SNORD45.4-201ENST00000516629 73 ntBASIC2.4□□□□□ -2.03
ITGA1P56199 RNU7-28P-201ENST00000516759 62 ntBASIC2.4□□□□□ -2.03
ITGA1P56199 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.4□□□□□ -2.03
ITGA1P56199 AL049779.4-201ENST00000604500 156 ntBASIC2.4□□□□□ -2.03
ITGA1P56199 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.03
ITGA1P56199 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.39□□□□□ -2.03
ITGA1P56199 RNA5SP289-201ENST00000362332 137 ntBASIC2.39□□□□□ -2.03
ITGA1P56199 Y_RNA.265-201ENST00000364677 108 ntBASIC2.39□□□□□ -2.03
ITGA1P56199 RNU1-91P-201ENST00000364746 163 ntBASIC2.39□□□□□ -2.03
ITGA1P56199 Y_RNA.336-201ENST00000365307 109 ntBASIC2.39□□□□□ -2.03
ITGA1P56199 RNU6-1189P-201ENST00000383958 107 ntBASIC2.39□□□□□ -2.03
ITGA1P56199 RNA5SP109-201ENST00000391010 116 ntBASIC2.39□□□□□ -2.03
ITGA1P56199 RN7SKP192-201ENST00000411291 327 ntBASIC2.39□□□□□ -2.03
ITGA1P56199 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC2.39□□□□□ -2.03
ITGA1P56199 MIR4524B-201ENST00000581569 115 ntBASIC2.39□□□□□ -2.03
ITGA1P56199 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.39□□□□□ -2.03
ITGA1P56199 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.39□□□□□ -2.03
ITGA1P56199 Y_RNA.37-201ENST00000362606 108 ntBASIC2.38□□□□□ -2.03
ITGA1P56199 Y_RNA.43-201ENST00000362670 111 ntBASIC2.38□□□□□ -2.03
ITGA1P56199 SNORA38-201ENST00000363946 132 ntBASIC2.38□□□□□ -2.03
ITGA1P56199 SNORA2.2-201ENST00000365473 135 ntBASIC2.38□□□□□ -2.03
ITGA1P56199 Y_RNA.547-201ENST00000384654 119 ntBASIC2.38□□□□□ -2.03
ITGA1P56199 SNORA80E-201ENST00000384744 137 ntBASIC2.38□□□□□ -2.03
ITGA1P56199 MIR570-201ENST00000384917 97 ntBASIC2.38□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 130.9 ms