Protein–RNA interactions for Protein: P55771

PAX9, Paired box protein Pax-9, humanhuman

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX9P55771 MIR8081-201ENST00000611533 95 ntBASIC1.26□□□□□ -2.21
PAX9P55771 MIR6845-201ENST00000613182 61 ntBASIC1.26□□□□□ -2.21
PAX9P55771 MIR653-201ENST00000385279 96 ntBASIC1.25□□□□□ -2.21
PAX9P55771 MT-TT-201ENST00000387460 66 ntBASIC1.25□□□□□ -2.21
PAX9P55771 RNU6-381P-201ENST00000391259 108 ntBASIC1.25□□□□□ -2.21
PAX9P55771 MIR1289-2-201ENST00000408360 111 ntBASIC1.25□□□□□ -2.21
PAX9P55771 Y_RNA.618-201ENST00000410949 107 ntBASIC1.25□□□□□ -2.21
PAX9P55771 Y_RNA.626-201ENST00000411288 95 ntBASIC1.25□□□□□ -2.21
PAX9P55771 RPS27P16-201ENST00000425758 201 ntBASIC1.25□□□□□ -2.21
PAX9P55771 RPS29P23-201ENST00000458635 123 ntBASIC1.25□□□□□ -2.21
PAX9P55771 snoU13.15-201ENST00000459407 104 ntBASIC1.25□□□□□ -2.21
PAX9P55771 AC079140.2-201ENST00000506193 142 ntBASIC1.25□□□□□ -2.21
PAX9P55771 RNU6-453P-201ENST00000516819 85 ntBASIC1.25□□□□□ -2.21
PAX9P55771 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.25□□□□□ -2.21
PAX9P55771 AC087685.1-201ENST00000587507 141 ntBASIC1.25□□□□□ -2.21
PAX9P55771 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.25□□□□□ -2.21
PAX9P55771 uc_338.4-201ENST00000616635 176 ntBASIC1.25□□□□□ -2.21
PAX9P55771 AL442644.1-201ENST00000454390 3105 ntBASIC1.24□□□□□ -2.21
PAX9P55771 Y_RNA.262-201ENST00000364641 102 ntBASIC1.24□□□□□ -2.21
PAX9P55771 SNORA26.9-201ENST00000391322 122 ntBASIC1.24□□□□□ -2.21
PAX9P55771 RNU4-71P-201ENST00000516258 113 ntBASIC1.24□□□□□ -2.21
PAX9P55771 RNU7-149P-201ENST00000516739 59 ntBASIC1.24□□□□□ -2.21
PAX9P55771 Y_RNA.714-201ENST00000517065 90 ntBASIC1.24□□□□□ -2.21
PAX9P55771 AC090142.3-201ENST00000519012 385 ntBASIC1.24□□□□□ -2.21
PAX9P55771 MIR502-201ENST00000606349 86 ntBASIC1.24□□□□□ -2.21
PAX9P55771 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.24□□□□□ -2.21
PAX9P55771 SNORD14E-201ENST00000364009 85 ntBASIC1.23□□□□□ -2.21
PAX9P55771 Y_RNA.308-201ENST00000365043 101 ntBASIC1.23□□□□□ -2.21
PAX9P55771 Y_RNA.489-201ENST00000384410 101 ntBASIC1.23□□□□□ -2.21
PAX9P55771 MIR516B2-201ENST00000385190 85 ntBASIC1.23□□□□□ -2.21
PAX9P55771 SNORD41-201ENST00000386967 70 ntBASIC1.23□□□□□ -2.21
PAX9P55771 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC1.23□□□□□ -2.21
PAX9P55771 AC023790.1-201ENST00000482174 347 ntBASIC1.23□□□□□ -2.21
PAX9P55771 RNA5SP445-201ENST00000515889 115 ntBASIC1.23□□□□□ -2.21
PAX9P55771 SNORD77.4-201ENST00000516158 81 ntBASIC1.23□□□□□ -2.21
PAX9P55771 SNORA25.15-201ENST00000516487 89 ntBASIC1.23□□□□□ -2.21
PAX9P55771 AC090049.2-201ENST00000550377 109 ntBASIC1.23□□□□□ -2.21
PAX9P55771 MIR4422-201ENST00000581938 83 ntBASIC1.23□□□□□ -2.21
PAX9P55771 AC009779.6-201ENST00000603972 165 ntBASIC1.23□□□□□ -2.21
PAX9P55771 AC078938.1-201ENST00000620993 318 ntBASIC1.23□□□□□ -2.21
PAX9P55771 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
PAX9P55771 RNU1-42P-201ENST00000364033 160 ntBASIC1.22□□□□□ -2.21
PAX9P55771 RNU6-268P-201ENST00000364174 107 ntBASIC1.22□□□□□ -2.21
PAX9P55771 Y_RNA.336-201ENST00000365307 109 ntBASIC1.22□□□□□ -2.21
PAX9P55771 RNU6-1138P-201ENST00000365359 106 ntBASIC1.22□□□□□ -2.21
PAX9P55771 RNU4-17P-201ENST00000365598 141 ntBASIC1.22□□□□□ -2.21
PAX9P55771 MIR452-201ENST00000385020 85 ntBASIC1.22□□□□□ -2.21
PAX9P55771 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.22□□□□□ -2.21
PAX9P55771 Y_RNA.587-201ENST00000391210 103 ntBASIC1.22□□□□□ -2.21
PAX9P55771 RNU6-493P-201ENST00000391321 108 ntBASIC1.22□□□□□ -2.21
PAX9P55771 MIR1304-201ENST00000408243 91 ntBASIC1.22□□□□□ -2.21
PAX9P55771 RNU6-955P-201ENST00000410497 104 ntBASIC1.22□□□□□ -2.21
PAX9P55771 AC015922.2-201ENST00000435593 184 ntBASIC1.22□□□□□ -2.21
PAX9P55771 HMGN2P32-201ENST00000444648 269 ntBASIC1.22□□□□□ -2.21
PAX9P55771 AC245517.4-201ENST00000448601 281 ntBASIC1.22□□□□□ -2.21
PAX9P55771 COX6CP14-201ENST00000469580 174 ntBASIC1.22□□□□□ -2.21
PAX9P55771 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.22□□□□□ -2.21
PAX9P55771 RNU6-922P-201ENST00000516753 99 ntBASIC1.22□□□□□ -2.21
PAX9P55771 RNU6-388P-201ENST00000517012 105 ntBASIC1.22□□□□□ -2.21
PAX9P55771 RNU6-389P-201ENST00000517048 105 ntBASIC1.22□□□□□ -2.21
PAX9P55771 MIR3937-201ENST00000580135 106 ntBASIC1.22□□□□□ -2.21
PAX9P55771 MIR4308-201ENST00000580634 81 ntBASIC1.22□□□□□ -2.21
PAX9P55771 MIR3683-201ENST00000580847 82 ntBASIC1.22□□□□□ -2.21
PAX9P55771 FAM106DP-201ENST00000586416 501 ntBASIC1.22□□□□□ -2.21
PAX9P55771 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
PAX9P55771 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
PAX9P55771 AP000648.3-201ENST00000623539 4507 ntBASIC1.21□□□□□ -2.22
PAX9P55771 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC1.21□□□□□ -2.22
PAX9P55771 RNU6-923P-201ENST00000364753 107 ntBASIC1.21□□□□□ -2.22
PAX9P55771 SNORA2.2-201ENST00000365473 135 ntBASIC1.21□□□□□ -2.22
PAX9P55771 RNU6-442P-201ENST00000383968 104 ntBASIC1.21□□□□□ -2.22
PAX9P55771 MIR504-201ENST00000385065 83 ntBASIC1.21□□□□□ -2.22
PAX9P55771 MIR616-201ENST00000385293 97 ntBASIC1.21□□□□□ -2.22
PAX9P55771 RNU6ATAC23P-201ENST00000408448 123 ntBASIC1.21□□□□□ -2.22
PAX9P55771 SNX2P2-201ENST00000424553 323 ntBASIC1.21□□□□□ -2.22
PAX9P55771 RNA5SP61-201ENST00000516453 100 ntBASIC1.21□□□□□ -2.22
PAX9P55771 RNU6-902P-201ENST00000517212 91 ntBASIC1.21□□□□□ -2.22
PAX9P55771 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.21□□□□□ -2.22
PAX9P55771 AC130289.1-201ENST00000577321 73 ntBASIC1.21□□□□□ -2.22
PAX9P55771 AP000942.4-201ENST00000604811 241 ntBASIC1.21□□□□□ -2.22
PAX9P55771 MIR7974-201ENST00000615835 79 ntBASIC1.21□□□□□ -2.22
PAX9P55771 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.21□□□□□ -2.22
PAX9P55771 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
PAX9P55771 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.21□□□□□ -2.22
PAX9P55771 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.2□□□□□ -2.22
PAX9P55771 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
PAX9P55771 SNORD33-201ENST00000362761 85 ntBASIC1.2□□□□□ -2.22
PAX9P55771 Y_RNA.486-201ENST00000384398 107 ntBASIC1.2□□□□□ -2.22
PAX9P55771 AL627390.1-201ENST00000396055 340 ntBASIC1.2□□□□□ -2.22
PAX9P55771 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC1.2□□□□□ -2.22
PAX9P55771 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
PAX9P55771 AL512310.8-201ENST00000550183 120 ntBASIC1.2□□□□□ -2.22
PAX9P55771 AL513534.2-201ENST00000603836 250 ntBASIC1.2□□□□□ -2.22
PAX9P55771 AL391903.3-201ENST00000612158 163 ntBASIC1.2□□□□□ -2.22
PAX9P55771 AC006441.5-201ENST00000612680 209 ntBASIC1.2□□□□□ -2.22
PAX9P55771 Pinc.1-201ENST00000616452 154 ntBASIC1.2□□□□□ -2.22
PAX9P55771 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.2□□□□□ -2.22
PAX9P55771 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
PAX9P55771 Y_RNA.199-201ENST00000364014 102 ntBASIC1.19□□□□□ -2.22
PAX9P55771 Y_RNA.200-201ENST00000364018 102 ntBASIC1.19□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 169.4 ms