Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 MRPS35P2-201ENST00000508242 191 ntBASIC0.78□□□□□ -2.28
APOC4P55056 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.78□□□□□ -2.28
APOC4P55056 AC113195.1-201ENST00000579952 141 ntBASIC0.78□□□□□ -2.28
APOC4P55056 MIR4764-201ENST00000580680 88 ntBASIC0.78□□□□□ -2.28
APOC4P55056 MIR2681-201ENST00000581814 105 ntBASIC0.78□□□□□ -2.28
APOC4P55056 MIR3171-201ENST00000584270 74 ntBASIC0.78□□□□□ -2.28
APOC4P55056 AC008507.4-201ENST00000585464 127 ntBASIC0.78□□□□□ -2.28
APOC4P55056 JPX_2.1-201ENST00000614161 69 ntBASIC0.78□□□□□ -2.28
APOC4P55056 AC007742.2-201ENST00000618226 398 ntBASIC0.78□□□□□ -2.28
APOC4P55056 RNA5SP264-201ENST00000363115 107 ntBASIC0.77□□□□□ -2.29
APOC4P55056 RNU6-770P-201ENST00000363929 105 ntBASIC0.77□□□□□ -2.29
APOC4P55056 RNU6-899P-201ENST00000363947 107 ntBASIC0.77□□□□□ -2.29
APOC4P55056 Y_RNA.224-201ENST00000364308 111 ntBASIC0.77□□□□□ -2.29
APOC4P55056 Y_RNA.276-201ENST00000364732 109 ntBASIC0.77□□□□□ -2.29
APOC4P55056 Y_RNA.455-201ENST00000384230 98 ntBASIC0.77□□□□□ -2.29
APOC4P55056 Y_RNA.527-201ENST00000384573 102 ntBASIC0.77□□□□□ -2.29
APOC4P55056 RNU6-763P-201ENST00000390865 106 ntBASIC0.77□□□□□ -2.29
APOC4P55056 MTCO2P33-201ENST00000402100 465 ntBASIC0.77□□□□□ -2.29
APOC4P55056 POLR2J4-204ENST00000418424 324 ntBASIC0.77□□□□□ -2.29
APOC4P55056 RPS29P28-201ENST00000446439 141 ntBASIC0.77□□□□□ -2.29
APOC4P55056 SNORD11-201ENST00000459124 84 ntBASIC0.77□□□□□ -2.29
APOC4P55056 Y_RNA.637-201ENST00000459424 114 ntBASIC0.77□□□□□ -2.29
APOC4P55056 RNU7-43P-201ENST00000516554 64 ntBASIC0.77□□□□□ -2.29
APOC4P55056 RPL23AP91-201ENST00000569211 455 ntBASIC0.77□□□□□ -2.29
APOC4P55056 MIR4680-201ENST00000580906 66 ntBASIC0.77□□□□□ -2.29
APOC4P55056 AL355297.3-201ENST00000604082 446 ntBASIC0.77□□□□□ -2.29
APOC4P55056 AL020996.3-201ENST00000606617 222 ntBASIC0.77□□□□□ -2.29
APOC4P55056 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.77□□□□□ -2.29
APOC4P55056 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.77□□□□□ -2.29
APOC4P55056 AC068700.1-201ENST00000565862 3754 ntBASIC0.76□□□□□ -2.29
APOC4P55056 Y_RNA.26-201ENST00000362539 101 ntBASIC0.76□□□□□ -2.29
APOC4P55056 RNU6-268P-201ENST00000364174 107 ntBASIC0.76□□□□□ -2.29
APOC4P55056 SNORD114-24-201ENST00000365029 72 ntBASIC0.76□□□□□ -2.29
APOC4P55056 RNU1-36P-201ENST00000365130 165 ntBASIC0.76□□□□□ -2.29
APOC4P55056 RNU6-806P-201ENST00000365147 105 ntBASIC0.76□□□□□ -2.29
APOC4P55056 RNU6-290P-201ENST00000365212 101 ntBASIC0.76□□□□□ -2.29
APOC4P55056 RNU6-442P-201ENST00000383968 104 ntBASIC0.76□□□□□ -2.29
APOC4P55056 Y_RNA.541-201ENST00000384640 113 ntBASIC0.76□□□□□ -2.29
APOC4P55056 MIR215-201ENST00000384858 110 ntBASIC0.76□□□□□ -2.29
APOC4P55056 RPL21P38-201ENST00000418090 167 ntBASIC0.76□□□□□ -2.29
APOC4P55056 MTCYBP6-201ENST00000441810 138 ntBASIC0.76□□□□□ -2.29
APOC4P55056 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC0.76□□□□□ -2.29
APOC4P55056 SNORD124-201ENST00000459577 104 ntBASIC0.76□□□□□ -2.29
APOC4P55056 RNU6-830P-201ENST00000516353 107 ntBASIC0.76□□□□□ -2.29
APOC4P55056 RNU6-1137P-201ENST00000517073 99 ntBASIC0.76□□□□□ -2.29
APOC4P55056 AC131281.1-201ENST00000522984 164 ntBASIC0.76□□□□□ -2.29
APOC4P55056 MIR4452-201ENST00000583004 71 ntBASIC0.76□□□□□ -2.29
APOC4P55056 AC136443.5-201ENST00000603741 370 ntBASIC0.76□□□□□ -2.29
APOC4P55056 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.76□□□□□ -2.29
APOC4P55056 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC0.76□□□□□ -2.29
APOC4P55056 AC008163.1-202ENST00000636004 2889 ntBASIC0.76□□□□□ -2.29
APOC4P55056 RNU6-1187P-201ENST00000364771 110 ntBASIC0.75□□□□□ -2.29
APOC4P55056 MIR200A-201ENST00000384875 90 ntBASIC0.75□□□□□ -2.29
APOC4P55056 AL603910.2-201ENST00000407268 136 ntBASIC0.75□□□□□ -2.29
APOC4P55056 MIR1185-1-201ENST00000408598 86 ntBASIC0.75□□□□□ -2.29
APOC4P55056 RPL39P28-201ENST00000465655 155 ntBASIC0.75□□□□□ -2.29
APOC4P55056 RNU6-113P-201ENST00000516653 101 ntBASIC0.75□□□□□ -2.29
APOC4P55056 SNORA40.15-201ENST00000516884 107 ntBASIC0.75□□□□□ -2.29
APOC4P55056 MIR548AR-201ENST00000582191 57 ntBASIC0.75□□□□□ -2.29
APOC4P55056 AL078603.1-201ENST00000603824 313 ntBASIC0.75□□□□□ -2.29
APOC4P55056 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.75□□□□□ -2.29
APOC4P55056 Y_RNA.19-201ENST00000362462 99 ntBASIC0.74□□□□□ -2.29
APOC4P55056 SNORA25.3-201ENST00000363205 127 ntBASIC0.74□□□□□ -2.29
APOC4P55056 Y_RNA.153-201ENST00000363615 91 ntBASIC0.74□□□□□ -2.29
APOC4P55056 Y_RNA.210-201ENST00000364161 110 ntBASIC0.74□□□□□ -2.29
APOC4P55056 RNU6-326P-201ENST00000365480 107 ntBASIC0.74□□□□□ -2.29
APOC4P55056 RNU6-144P-201ENST00000383951 107 ntBASIC0.74□□□□□ -2.29
APOC4P55056 SNORD38C-201ENST00000384381 69 ntBASIC0.74□□□□□ -2.29
APOC4P55056 SNORD28B-201ENST00000390993 75 ntBASIC0.74□□□□□ -2.29
APOC4P55056 SNORD72-201ENST00000390994 80 ntBASIC0.74□□□□□ -2.29
APOC4P55056 RPS29P29-201ENST00000456396 171 ntBASIC0.74□□□□□ -2.29
APOC4P55056 RNU7-90P-201ENST00000459216 62 ntBASIC0.74□□□□□ -2.29
APOC4P55056 RN7SKP164-201ENST00000516138 266 ntBASIC0.74□□□□□ -2.29
APOC4P55056 RNY3P15-201ENST00000516297 97 ntBASIC0.74□□□□□ -2.29
APOC4P55056 Y_RNA.701-201ENST00000516812 110 ntBASIC0.74□□□□□ -2.29
APOC4P55056 RNU2-31P-201ENST00000516954 155 ntBASIC0.74□□□□□ -2.29
APOC4P55056 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.74□□□□□ -2.29
APOC4P55056 SNORD114-21-201ENST00000606412 72 ntBASIC0.74□□□□□ -2.29
APOC4P55056 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC0.74□□□□□ -2.29
APOC4P55056 AC006441.5-201ENST00000612680 209 ntBASIC0.74□□□□□ -2.29
APOC4P55056 MIR6857-201ENST00000613267 93 ntBASIC0.74□□□□□ -2.29
APOC4P55056 Pinc.1-201ENST00000616452 154 ntBASIC0.74□□□□□ -2.29
APOC4P55056 AC013791.1-201ENST00000616619 62 ntBASIC0.74□□□□□ -2.29
APOC4P55056 MIR103A2-201ENST00000362154 78 ntBASIC0.73□□□□□ -2.29
APOC4P55056 RNU6-1272P-201ENST00000362776 107 ntBASIC0.73□□□□□ -2.29
APOC4P55056 SNORD114-27-201ENST00000363766 70 ntBASIC0.73□□□□□ -2.29
APOC4P55056 RNU4-38P-201ENST00000364472 129 ntBASIC0.73□□□□□ -2.29
APOC4P55056 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.73□□□□□ -2.29
APOC4P55056 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.73□□□□□ -2.29
APOC4P55056 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC0.73□□□□□ -2.29
APOC4P55056 Y_RNA.64-201ENST00000362845 102 ntBASIC0.72□□□□□ -2.29
APOC4P55056 RNU6-1205P-201ENST00000363625 106 ntBASIC0.72□□□□□ -2.29
APOC4P55056 RNA5SP48-201ENST00000363969 126 ntBASIC0.72□□□□□ -2.29
APOC4P55056 Y_RNA.202-201ENST00000364083 110 ntBASIC0.72□□□□□ -2.29
APOC4P55056 MIR1302-7-201ENST00000408841 72 ntBASIC0.72□□□□□ -2.29
APOC4P55056 AL392103.1-201ENST00000447000 198 ntBASIC0.72□□□□□ -2.29
APOC4P55056 AC091959.1-201ENST00000495857 238 ntBASIC0.72□□□□□ -2.29
APOC4P55056 RNU6-1143P-201ENST00000516125 104 ntBASIC0.72□□□□□ -2.29
APOC4P55056 AP003733.2-201ENST00000529409 171 ntBASIC0.72□□□□□ -2.29
APOC4P55056 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC0.72□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 127 ms