Protein–RNA interactions for Protein: P54289

CACNA2D1, Voltage-dependent calcium channel subunit alpha-2/delta-1, humanhuman

Predictions only

Length 1,103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D1P54289 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.15□□□□□ -2.06
CACNA2D1P54289 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
CACNA2D1P54289 Y_RNA.66-201ENST00000362862 102 ntBASIC2.15□□□□□ -2.07
CACNA2D1P54289 SNORA6-201ENST00000384033 151 ntBASIC2.15□□□□□ -2.07
CACNA2D1P54289 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
CACNA2D1P54289 SNORD72-201ENST00000390994 80 ntBASIC2.15□□□□□ -2.07
CACNA2D1P54289 AL158823.1-201ENST00000418441 478 ntBASIC2.15□□□□□ -2.07
CACNA2D1P54289 SNRPGP10-201ENST00000432323 225 ntBASIC2.15□□□□□ -2.07
CACNA2D1P54289 HMGN2P3-201ENST00000433603 273 ntBASIC2.15□□□□□ -2.07
CACNA2D1P54289 HMGN2P5-201ENST00000436882 273 ntBASIC2.15□□□□□ -2.07
CACNA2D1P54289 AL353689.1-201ENST00000438895 199 ntBASIC2.15□□□□□ -2.07
CACNA2D1P54289 RNU5E-3P-201ENST00000515913 68 ntBASIC2.15□□□□□ -2.07
CACNA2D1P54289 Y_RNA.692-201ENST00000516627 105 ntBASIC2.15□□□□□ -2.07
CACNA2D1P54289 RNU6-365P-201ENST00000517113 106 ntBASIC2.15□□□□□ -2.07
CACNA2D1P54289 AC007751.1-201ENST00000529260 376 ntBASIC2.15□□□□□ -2.07
CACNA2D1P54289 Y_RNA.757-201ENST00000578934 114 ntBASIC2.15□□□□□ -2.07
CACNA2D1P54289 uc_338.20-201ENST00000621563 178 ntBASIC2.15□□□□□ -2.07
CACNA2D1P54289 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.07
CACNA2D1P54289 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.15□□□□□ -2.07
CACNA2D1P54289 AC018630.2-201ENST00000534866 2403 ntBASIC2.15□□□□□ -2.07
CACNA2D1P54289 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
CACNA2D1P54289 Y_RNA.99-201ENST00000363138 105 ntBASIC2.14□□□□□ -2.07
CACNA2D1P54289 Y_RNA.120-201ENST00000363304 110 ntBASIC2.14□□□□□ -2.07
CACNA2D1P54289 RNU6-309P-201ENST00000364573 106 ntBASIC2.14□□□□□ -2.07
CACNA2D1P54289 Y_RNA.563-201ENST00000384707 108 ntBASIC2.14□□□□□ -2.07
CACNA2D1P54289 ATP5J2P3-201ENST00000451550 258 ntBASIC2.14□□□□□ -2.07
CACNA2D1P54289 RN7SKP179-201ENST00000516126 217 ntBASIC2.14□□□□□ -2.07
CACNA2D1P54289 RNU1-142P-201ENST00000516682 145 ntBASIC2.14□□□□□ -2.07
CACNA2D1P54289 RNU7-193P-201ENST00000516723 65 ntBASIC2.14□□□□□ -2.07
CACNA2D1P54289 RNU1-40P-201ENST00000516816 164 ntBASIC2.14□□□□□ -2.07
CACNA2D1P54289 RNU1-97P-201ENST00000516872 164 ntBASIC2.14□□□□□ -2.07
CACNA2D1P54289 MIR4662B-201ENST00000579498 81 ntBASIC2.14□□□□□ -2.07
CACNA2D1P54289 MIR3121-201ENST00000579680 77 ntBASIC2.14□□□□□ -2.07
CACNA2D1P54289 MIR5089-201ENST00000580047 84 ntBASIC2.14□□□□□ -2.07
CACNA2D1P54289 AC022202.1-201ENST00000613515 211 ntBASIC2.14□□□□□ -2.07
CACNA2D1P54289 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.14□□□□□ -2.07
CACNA2D1P54289 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC2.14□□□□□ -2.07
CACNA2D1P54289 Y_RNA.114-201ENST00000363265 113 ntBASIC2.13□□□□□ -2.07
CACNA2D1P54289 RNA5SP160-201ENST00000364866 120 ntBASIC2.13□□□□□ -2.07
CACNA2D1P54289 RNU6-1056P-201ENST00000383996 107 ntBASIC2.13□□□□□ -2.07
CACNA2D1P54289 SNORA1-201ENST00000384107 130 ntBASIC2.13□□□□□ -2.07
CACNA2D1P54289 SNORA8-201ENST00000384574 139 ntBASIC2.13□□□□□ -2.07
CACNA2D1P54289 RNU6-429P-201ENST00000384582 108 ntBASIC2.13□□□□□ -2.07
CACNA2D1P54289 RNA5SP323-201ENST00000391094 133 ntBASIC2.13□□□□□ -2.07
CACNA2D1P54289 SNORA26-201ENST00000391286 122 ntBASIC2.13□□□□□ -2.07
CACNA2D1P54289 AL158147.1-201ENST00000443970 75 ntBASIC2.13□□□□□ -2.07
CACNA2D1P54289 AL021397.1-201ENST00000451806 248 ntBASIC2.13□□□□□ -2.07
CACNA2D1P54289 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.13□□□□□ -2.07
CACNA2D1P54289 RNU6-772P-201ENST00000516042 105 ntBASIC2.13□□□□□ -2.07
CACNA2D1P54289 SNORA18.4-201ENST00000516440 124 ntBASIC2.13□□□□□ -2.07
CACNA2D1P54289 Y_RNA.690-201ENST00000516603 95 ntBASIC2.13□□□□□ -2.07
CACNA2D1P54289 RNU6-341P-201ENST00000516973 96 ntBASIC2.13□□□□□ -2.07
CACNA2D1P54289 NDUFA5P6-201ENST00000542110 379 ntBASIC2.13□□□□□ -2.07
CACNA2D1P54289 MIR3129-201ENST00000581095 76 ntBASIC2.13□□□□□ -2.07
CACNA2D1P54289 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
CACNA2D1P54289 AL353149.1-201ENST00000610667 244 ntBASIC2.13□□□□□ -2.07
CACNA2D1P54289 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC2.13□□□□□ -2.07
CACNA2D1P54289 MIR6715A-201ENST00000615929 79 ntBASIC2.13□□□□□ -2.07
CACNA2D1P54289 MIR6129-201ENST00000616087 109 ntBASIC2.13□□□□□ -2.07
CACNA2D1P54289 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.12□□□□□ -2.07
CACNA2D1P54289 MIR126-201ENST00000362291 85 ntBASIC2.12□□□□□ -2.07
CACNA2D1P54289 SNORA1B-201ENST00000362535 133 ntBASIC2.12□□□□□ -2.07
CACNA2D1P54289 RNU6-862P-201ENST00000362804 105 ntBASIC2.12□□□□□ -2.07
CACNA2D1P54289 SNORD18B-201ENST00000365659 72 ntBASIC2.12□□□□□ -2.07
CACNA2D1P54289 SNORD61-201ENST00000384252 73 ntBASIC2.12□□□□□ -2.07
CACNA2D1P54289 SNORD23.1-201ENST00000408212 104 ntBASIC2.12□□□□□ -2.07
CACNA2D1P54289 Y_RNA.630-201ENST00000411370 108 ntBASIC2.12□□□□□ -2.07
CACNA2D1P54289 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.12□□□□□ -2.07
CACNA2D1P54289 RNU1-131P-201ENST00000458943 161 ntBASIC2.12□□□□□ -2.07
CACNA2D1P54289 AC025033.1-201ENST00000463883 194 ntBASIC2.12□□□□□ -2.07
CACNA2D1P54289 AL163195.1-201ENST00000496941 348 ntBASIC2.12□□□□□ -2.07
CACNA2D1P54289 Y_RNA.666-201ENST00000516187 112 ntBASIC2.12□□□□□ -2.07
CACNA2D1P54289 Y_RNA.712-201ENST00000517011 92 ntBASIC2.12□□□□□ -2.07
CACNA2D1P54289 RNU6-1270P-201ENST00000517128 108 ntBASIC2.12□□□□□ -2.07
CACNA2D1P54289 MIR3935-201ENST00000583472 104 ntBASIC2.12□□□□□ -2.07
CACNA2D1P54289 AL591926.4-201ENST00000616895 298 ntBASIC2.12□□□□□ -2.07
CACNA2D1P54289 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.12□□□□□ -2.07
CACNA2D1P54289 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
CACNA2D1P54289 Y_RNA.52-201ENST00000362760 96 ntBASIC2.11□□□□□ -2.07
CACNA2D1P54289 SNORD115-3-201ENST00000363100 82 ntBASIC2.11□□□□□ -2.07
CACNA2D1P54289 RNA5SP493-201ENST00000364115 91 ntBASIC2.11□□□□□ -2.07
CACNA2D1P54289 Y_RNA.280-201ENST00000364765 112 ntBASIC2.11□□□□□ -2.07
CACNA2D1P54289 RNU6-160P-201ENST00000384591 107 ntBASIC2.11□□□□□ -2.07
CACNA2D1P54289 SNORA40.5-201ENST00000391061 128 ntBASIC2.11□□□□□ -2.07
CACNA2D1P54289 RNU6-1064P-201ENST00000410626 104 ntBASIC2.11□□□□□ -2.07
CACNA2D1P54289 RNA5SP127-201ENST00000411051 133 ntBASIC2.11□□□□□ -2.07
CACNA2D1P54289 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.11□□□□□ -2.07
CACNA2D1P54289 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC2.11□□□□□ -2.07
CACNA2D1P54289 AL049830.1-201ENST00000468034 425 ntBASIC2.11□□□□□ -2.07
CACNA2D1P54289 RNU6-1061P-201ENST00000516530 99 ntBASIC2.11□□□□□ -2.07
CACNA2D1P54289 RNU6-504P-201ENST00000516568 104 ntBASIC2.11□□□□□ -2.07
CACNA2D1P54289 AC133485.4-201ENST00000561835 220 ntBASIC2.11□□□□□ -2.07
CACNA2D1P54289 AC138907.4-201ENST00000570107 226 ntBASIC2.11□□□□□ -2.07
CACNA2D1P54289 AC026271.5-201ENST00000577873 130 ntBASIC2.11□□□□□ -2.07
CACNA2D1P54289 AC008507.4-201ENST00000585464 127 ntBASIC2.11□□□□□ -2.07
CACNA2D1P54289 AL365205.2-201ENST00000594586 68 ntBASIC2.11□□□□□ -2.07
CACNA2D1P54289 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.1□□□□□ -2.07
CACNA2D1P54289 MTND5P32-201ENST00000560711 1802 ntBASIC2.1□□□□□ -2.07
CACNA2D1P54289 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
CACNA2D1P54289 RNU6-834P-201ENST00000362367 110 ntBASIC2.1□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 133.1 ms