Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
COPAP53621 Y_RNA.435-201ENST00000384095 112 ntBASIC1.89□□□□□ -2.11
COPAP53621 MIR9-3-201ENST00000385084 90 ntBASIC1.89□□□□□ -2.11
COPAP53621 SNORA12.1-201ENST00000390873 148 ntBASIC1.89□□□□□ -2.11
COPAP53621 JTBP1-201ENST00000441314 247 ntBASIC1.89□□□□□ -2.11
COPAP53621 SNORD11-201ENST00000459124 84 ntBASIC1.89□□□□□ -2.11
COPAP53621 RPS29P11-201ENST00000496507 171 ntBASIC1.89□□□□□ -2.11
COPAP53621 Y_RNA.797-201ENST00000515977 94 ntBASIC1.89□□□□□ -2.11
COPAP53621 MIR4744-201ENST00000581563 82 ntBASIC1.89□□□□□ -2.11
COPAP53621 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.89□□□□□ -2.11
COPAP53621 AC087685.1-201ENST00000587507 141 ntBASIC1.89□□□□□ -2.11
COPAP53621 AL049861.1-201ENST00000603130 150 ntBASIC1.89□□□□□ -2.11
COPAP53621 AP000942.3-201ENST00000603702 160 ntBASIC1.89□□□□□ -2.11
COPAP53621 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.89□□□□□ -2.11
COPAP53621 Y_RNA.233-201ENST00000364407 101 ntBASIC1.88□□□□□ -2.11
COPAP53621 RNU6-203P-201ENST00000384038 104 ntBASIC1.88□□□□□ -2.11
COPAP53621 RNY3P5-201ENST00000384127 102 ntBASIC1.88□□□□□ -2.11
COPAP53621 MIR522-201ENST00000385071 87 ntBASIC1.88□□□□□ -2.11
COPAP53621 RNU6-1228P-201ENST00000391014 107 ntBASIC1.88□□□□□ -2.11
COPAP53621 Y_RNA.587-201ENST00000391210 103 ntBASIC1.88□□□□□ -2.11
COPAP53621 RPL30P13-201ENST00000418873 348 ntBASIC1.88□□□□□ -2.11
COPAP53621 PIGPP3-201ENST00000425307 415 ntBASIC1.88□□□□□ -2.11
COPAP53621 CALM2P4-201ENST00000430810 426 ntBASIC1.88□□□□□ -2.11
COPAP53621 RNU7-120P-201ENST00000459334 63 ntBASIC1.88□□□□□ -2.11
COPAP53621 AC099513.1-201ENST00000490423 301 ntBASIC1.88□□□□□ -2.11
COPAP53621 AC107393.1-201ENST00000512403 346 ntBASIC1.88□□□□□ -2.11
COPAP53621 RNU6-453P-201ENST00000516819 85 ntBASIC1.88□□□□□ -2.11
COPAP53621 AL021707.8-201ENST00000609428 183 ntBASIC1.88□□□□□ -2.11
COPAP53621 uc_338.4-201ENST00000616635 176 ntBASIC1.88□□□□□ -2.11
COPAP53621 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
COPAP53621 RNU6-1084P-201ENST00000362498 107 ntBASIC1.87□□□□□ -2.11
COPAP53621 Y_RNA.182-201ENST00000363880 111 ntBASIC1.87□□□□□ -2.11
COPAP53621 Y_RNA.242-201ENST00000364473 110 ntBASIC1.87□□□□□ -2.11
COPAP53621 U8.5-201ENST00000364528 136 ntBASIC1.87□□□□□ -2.11
COPAP53621 MT-TT-201ENST00000387460 66 ntBASIC1.87□□□□□ -2.11
COPAP53621 MIR802-201ENST00000390235 94 ntBASIC1.87□□□□□ -2.11
COPAP53621 AL606845.1-201ENST00000404881 255 ntBASIC1.87□□□□□ -2.11
COPAP53621 RNU2-64P-201ENST00000411315 191 ntBASIC1.87□□□□□ -2.11
COPAP53621 SCARNA8-201ENST00000515924 131 ntBASIC1.87□□□□□ -2.11
COPAP53621 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.87□□□□□ -2.11
COPAP53621 RNA5SP168-201ENST00000516642 112 ntBASIC1.87□□□□□ -2.11
COPAP53621 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.87□□□□□ -2.11
COPAP53621 MIR4762-201ENST00000585261 75 ntBASIC1.87□□□□□ -2.11
COPAP53621 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.87□□□□□ -2.11
COPAP53621 WWP1P1-201ENST00000466609 2769 ntBASIC1.87□□□□□ -2.11
COPAP53621 Y_RNA.140-201ENST00000363474 103 ntBASIC1.86□□□□□ -2.11
COPAP53621 SNORA17.3-201ENST00000391159 129 ntBASIC1.86□□□□□ -2.11
COPAP53621 U8.16-201ENST00000391279 133 ntBASIC1.86□□□□□ -2.11
COPAP53621 PGBD4P5-201ENST00000445958 426 ntBASIC1.86□□□□□ -2.11
COPAP53621 AC022559.1-201ENST00000520905 205 ntBASIC1.86□□□□□ -2.11
COPAP53621 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.86□□□□□ -2.11
COPAP53621 MIR3683-201ENST00000580847 82 ntBASIC1.86□□□□□ -2.11
COPAP53621 AC098479.1-201ENST00000609225 154 ntBASIC1.86□□□□□ -2.11
COPAP53621 AL513423.1-201ENST00000621695 132 ntBASIC1.86□□□□□ -2.11
COPAP53621 AC084768.2-201ENST00000622736 221 ntBASIC1.86□□□□□ -2.11
COPAP53621 AC095038.3-201ENST00000634439 195 ntBASIC1.86□□□□□ -2.11
COPAP53621 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.86□□□□□ -2.11
COPAP53621 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
COPAP53621 snoU2-30.1-201ENST00000365012 70 ntBASIC1.85□□□□□ -2.11
COPAP53621 RNU6-424P-201ENST00000384367 105 ntBASIC1.85□□□□□ -2.11
COPAP53621 RNU6-163P-201ENST00000384396 106 ntBASIC1.85□□□□□ -2.11
COPAP53621 RNU6-578P-201ENST00000390980 103 ntBASIC1.85□□□□□ -2.11
COPAP53621 NDUFA4P2-201ENST00000489989 244 ntBASIC1.85□□□□□ -2.11
COPAP53621 CYCTP-201ENST00000504253 315 ntBASIC1.85□□□□□ -2.11
COPAP53621 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.85□□□□□ -2.11
COPAP53621 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.85□□□□□ -2.11
COPAP53621 MIR3122-201ENST00000577243 73 ntBASIC1.85□□□□□ -2.11
COPAP53621 AC024614.2-201ENST00000577584 372 ntBASIC1.85□□□□□ -2.11
COPAP53621 AC120024.3-201ENST00000603167 156 ntBASIC1.85□□□□□ -2.11
COPAP53621 SNORD3E-202ENST00000627253 216 ntBASIC1.85□□□□□ -2.11
COPAP53621 MIR424-201ENST00000362227 98 ntBASIC1.84□□□□□ -2.11
COPAP53621 RNU6-1123P-201ENST00000362347 106 ntBASIC1.84□□□□□ -2.11
COPAP53621 SNORD14E-201ENST00000364009 85 ntBASIC1.84□□□□□ -2.11
COPAP53621 Y_RNA.270-201ENST00000364693 104 ntBASIC1.84□□□□□ -2.11
COPAP53621 RNU6-728P-201ENST00000365375 104 ntBASIC1.84□□□□□ -2.11
COPAP53621 AC004965.1-201ENST00000413033 213 ntBASIC1.84□□□□□ -2.11
COPAP53621 AL121914.1-201ENST00000450188 156 ntBASIC1.84□□□□□ -2.11
COPAP53621 RNU7-12P-201ENST00000516030 62 ntBASIC1.84□□□□□ -2.11
COPAP53621 RNU6-126P-201ENST00000516685 103 ntBASIC1.84□□□□□ -2.11
COPAP53621 RNU7-149P-201ENST00000516739 59 ntBASIC1.84□□□□□ -2.11
COPAP53621 RNU6-1116P-201ENST00000517269 99 ntBASIC1.84□□□□□ -2.11
COPAP53621 MIR4662B-201ENST00000579498 81 ntBASIC1.84□□□□□ -2.11
COPAP53621 AC108706.1-201ENST00000611053 297 ntBASIC1.84□□□□□ -2.11
COPAP53621 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC1.84□□□□□ -2.11
COPAP53621 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.84□□□□□ -2.11
COPAP53621 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
COPAP53621 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.83□□□□□ -2.12
COPAP53621 Y_RNA.75-201ENST00000362927 97 ntBASIC1.83□□□□□ -2.12
COPAP53621 RNA5SP190-201ENST00000365222 118 ntBASIC1.83□□□□□ -2.12
COPAP53621 MIR660-201ENST00000385235 97 ntBASIC1.83□□□□□ -2.12
COPAP53621 AL627390.1-201ENST00000396055 340 ntBASIC1.83□□□□□ -2.12
COPAP53621 SNORA79-201ENST00000408376 140 ntBASIC1.83□□□□□ -2.12
COPAP53621 Y_RNA.622-201ENST00000411091 108 ntBASIC1.83□□□□□ -2.12
COPAP53621 RNU2-55P-201ENST00000411146 174 ntBASIC1.83□□□□□ -2.12
COPAP53621 HMGN2P32-201ENST00000444648 269 ntBASIC1.83□□□□□ -2.12
COPAP53621 snoU13.9-201ENST00000458927 103 ntBASIC1.83□□□□□ -2.12
COPAP53621 SNORD13-201ENST00000459299 104 ntBASIC1.83□□□□□ -2.12
COPAP53621 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.83□□□□□ -2.12
COPAP53621 Y_RNA.662-201ENST00000516028 97 ntBASIC1.83□□□□□ -2.12
COPAP53621 SNORD77.4-201ENST00000516158 81 ntBASIC1.83□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 133.2 ms