Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 SNORA28-201ENST00000606769 126 ntBASIC1.68□□□□□ -2.14
CLCN3P51790 AL391903.3-201ENST00000612158 163 ntBASIC1.68□□□□□ -2.14
CLCN3P51790 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.68□□□□□ -2.14
CLCN3P51790 U6.106-201ENST00000636360 105 ntBASIC1.68□□□□□ -2.14
CLCN3P51790 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
CLCN3P51790 Y_RNA.7-201ENST00000362352 102 ntBASIC1.67□□□□□ -2.14
CLCN3P51790 Y_RNA.75-201ENST00000362927 97 ntBASIC1.67□□□□□ -2.14
CLCN3P51790 Y_RNA.229-201ENST00000364347 113 ntBASIC1.67□□□□□ -2.14
CLCN3P51790 SNORA4.2-201ENST00000365313 147 ntBASIC1.67□□□□□ -2.14
CLCN3P51790 MIR517C-201ENST00000385103 95 ntBASIC1.67□□□□□ -2.14
CLCN3P51790 MIR616-201ENST00000385293 97 ntBASIC1.67□□□□□ -2.14
CLCN3P51790 SNORA12.1-201ENST00000390873 148 ntBASIC1.67□□□□□ -2.14
CLCN3P51790 RNU6-440P-201ENST00000390882 105 ntBASIC1.67□□□□□ -2.14
CLCN3P51790 MIR1267-201ENST00000408723 78 ntBASIC1.67□□□□□ -2.14
CLCN3P51790 RNU6-383P-201ENST00000410864 94 ntBASIC1.67□□□□□ -2.14
CLCN3P51790 AL161935.2-201ENST00000414627 60 ntBASIC1.67□□□□□ -2.14
CLCN3P51790 RPL23AP54-201ENST00000495129 419 ntBASIC1.67□□□□□ -2.14
CLCN3P51790 RNU6-1219P-201ENST00000516143 112 ntBASIC1.67□□□□□ -2.14
CLCN3P51790 SNORA31.10-201ENST00000516482 106 ntBASIC1.67□□□□□ -2.14
CLCN3P51790 AP002004.2-201ENST00000531656 154 ntBASIC1.67□□□□□ -2.14
CLCN3P51790 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.67□□□□□ -2.14
CLCN3P51790 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
CLCN3P51790 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
CLCN3P51790 Y_RNA.4-201ENST00000362333 112 ntBASIC1.66□□□□□ -2.14
CLCN3P51790 Y_RNA.203-201ENST00000364106 102 ntBASIC1.66□□□□□ -2.14
CLCN3P51790 Y_RNA.796-201ENST00000364268 102 ntBASIC1.66□□□□□ -2.14
CLCN3P51790 Y_RNA.238-201ENST00000364441 102 ntBASIC1.66□□□□□ -2.14
CLCN3P51790 Y_RNA.293-201ENST00000364908 93 ntBASIC1.66□□□□□ -2.14
CLCN3P51790 Y_RNA.799-201ENST00000364992 102 ntBASIC1.66□□□□□ -2.14
CLCN3P51790 RNU6-439P-201ENST00000384188 106 ntBASIC1.66□□□□□ -2.14
CLCN3P51790 RNU6-1031P-201ENST00000384773 107 ntBASIC1.66□□□□□ -2.14
CLCN3P51790 MIR194-1-201ENST00000384892 85 ntBASIC1.66□□□□□ -2.14
CLCN3P51790 MIR934-201ENST00000401241 83 ntBASIC1.66□□□□□ -2.14
CLCN3P51790 AL034345.1-201ENST00000407768 123 ntBASIC1.66□□□□□ -2.14
CLCN3P51790 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.66□□□□□ -2.14
CLCN3P51790 SNORD11-201ENST00000459124 84 ntBASIC1.66□□□□□ -2.14
CLCN3P51790 RNU6-861P-201ENST00000516745 106 ntBASIC1.66□□□□□ -2.14
CLCN3P51790 RNU6-453P-201ENST00000516819 85 ntBASIC1.66□□□□□ -2.14
CLCN3P51790 RNU6-1212P-201ENST00000517023 104 ntBASIC1.66□□□□□ -2.14
CLCN3P51790 SNORA31.24-201ENST00000517232 57 ntBASIC1.66□□□□□ -2.14
CLCN3P51790 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.66□□□□□ -2.14
CLCN3P51790 SNORA77B-201ENST00000578179 125 ntBASIC1.66□□□□□ -2.14
CLCN3P51790 MIR4724-201ENST00000579485 89 ntBASIC1.66□□□□□ -2.14
CLCN3P51790 Y_RNA.24-201ENST00000362508 103 ntBASIC1.65□□□□□ -2.15
CLCN3P51790 SNORA1B-201ENST00000362535 133 ntBASIC1.65□□□□□ -2.15
CLCN3P51790 Y_RNA.150-201ENST00000363562 102 ntBASIC1.65□□□□□ -2.15
CLCN3P51790 RNU6-103P-201ENST00000363686 107 ntBASIC1.65□□□□□ -2.15
CLCN3P51790 Y_RNA.164-201ENST00000363709 102 ntBASIC1.65□□□□□ -2.15
CLCN3P51790 Y_RNA.441-201ENST00000384123 112 ntBASIC1.65□□□□□ -2.15
CLCN3P51790 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.65□□□□□ -2.15
CLCN3P51790 RNA5SP496-201ENST00000391240 109 ntBASIC1.65□□□□□ -2.15
CLCN3P51790 AL354695.1-201ENST00000427935 228 ntBASIC1.65□□□□□ -2.15
CLCN3P51790 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
CLCN3P51790 WWP1P1-201ENST00000466609 2769 ntBASIC1.64□□□□□ -2.15
CLCN3P51790 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.64□□□□□ -2.15
CLCN3P51790 RNU6-1123P-201ENST00000362347 106 ntBASIC1.64□□□□□ -2.15
CLCN3P51790 RNU6-275P-201ENST00000364910 107 ntBASIC1.64□□□□□ -2.15
CLCN3P51790 RNA5SP363-201ENST00000365072 115 ntBASIC1.64□□□□□ -2.15
CLCN3P51790 Y_RNA.412-201ENST00000384001 104 ntBASIC1.64□□□□□ -2.15
CLCN3P51790 RNU6-209P-201ENST00000384118 107 ntBASIC1.64□□□□□ -2.15
CLCN3P51790 RNY3P5-201ENST00000384127 102 ntBASIC1.64□□□□□ -2.15
CLCN3P51790 Y_RNA.464-201ENST00000384282 110 ntBASIC1.64□□□□□ -2.15
CLCN3P51790 MIR1304-201ENST00000408243 91 ntBASIC1.64□□□□□ -2.15
CLCN3P51790 RN7SKP51-201ENST00000410781 304 ntBASIC1.64□□□□□ -2.15
CLCN3P51790 RNU5E-9P-201ENST00000411164 104 ntBASIC1.64□□□□□ -2.15
CLCN3P51790 RNU7-34P-201ENST00000459394 64 ntBASIC1.64□□□□□ -2.15
CLCN3P51790 AC099513.1-201ENST00000490423 301 ntBASIC1.64□□□□□ -2.15
CLCN3P51790 AC074198.2-201ENST00000508153 258 ntBASIC1.64□□□□□ -2.15
CLCN3P51790 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.64□□□□□ -2.15
CLCN3P51790 RNU6-1291P-201ENST00000516591 104 ntBASIC1.64□□□□□ -2.15
CLCN3P51790 MRPS18CP4-201ENST00000535821 231 ntBASIC1.64□□□□□ -2.15
CLCN3P51790 MIR4762-201ENST00000585261 75 ntBASIC1.64□□□□□ -2.15
CLCN3P51790 RNU2-4P-201ENST00000606190 192 ntBASIC1.64□□□□□ -2.15
CLCN3P51790 AC108706.1-201ENST00000611053 297 ntBASIC1.64□□□□□ -2.15
CLCN3P51790 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.64□□□□□ -2.15
CLCN3P51790 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
CLCN3P51790 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.64□□□□□ -2.15
CLCN3P51790 MIR367-201ENST00000362299 68 ntBASIC1.63□□□□□ -2.15
CLCN3P51790 Y_RNA.23-201ENST00000362496 106 ntBASIC1.63□□□□□ -2.15
CLCN3P51790 RNU6-1209P-201ENST00000363655 107 ntBASIC1.63□□□□□ -2.15
CLCN3P51790 U8.5-201ENST00000364528 136 ntBASIC1.63□□□□□ -2.15
CLCN3P51790 Y_RNA.253-201ENST00000364562 112 ntBASIC1.63□□□□□ -2.15
CLCN3P51790 RNU6-1080P-201ENST00000383982 107 ntBASIC1.63□□□□□ -2.15
CLCN3P51790 RNU6-578P-201ENST00000390980 103 ntBASIC1.63□□□□□ -2.15
CLCN3P51790 RNA5SP482-201ENST00000391269 118 ntBASIC1.63□□□□□ -2.15
CLCN3P51790 RPL31P63-201ENST00000422565 375 ntBASIC1.63□□□□□ -2.15
CLCN3P51790 PGBD4P5-201ENST00000445958 426 ntBASIC1.63□□□□□ -2.15
CLCN3P51790 snoU13.9-201ENST00000458927 103 ntBASIC1.63□□□□□ -2.15
CLCN3P51790 NDUFA4P2-201ENST00000489989 244 ntBASIC1.63□□□□□ -2.15
CLCN3P51790 RNU2-56P-201ENST00000516826 190 ntBASIC1.63□□□□□ -2.15
CLCN3P51790 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.63□□□□□ -2.15
CLCN3P51790 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.63□□□□□ -2.15
CLCN3P51790 MIR4744-201ENST00000581563 82 ntBASIC1.63□□□□□ -2.15
CLCN3P51790 AL359821.1-201ENST00000605519 182 ntBASIC1.63□□□□□ -2.15
CLCN3P51790 AC021506.2-201ENST00000612354 169 ntBASIC1.63□□□□□ -2.15
CLCN3P51790 AL513423.1-201ENST00000621695 132 ntBASIC1.63□□□□□ -2.15
CLCN3P51790 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
CLCN3P51790 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.63□□□□□ -2.15
CLCN3P51790 AL442644.1-201ENST00000454390 3105 ntBASIC1.62□□□□□ -2.15
CLCN3P51790 MIR424-201ENST00000362227 98 ntBASIC1.62□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms