Protein–RNA interactions for Protein: P49711

CTCF, Transcriptional repressor CTCF, humanhuman

Predicted RBP Predictions only

Length 727 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFP49711 SNORA40.6-201ENST00000391153 128 ntBASIC1.54□□□□□ -2.16
CTCFP49711 RNU6-1203P-201ENST00000410703 110 ntBASIC1.54□□□□□ -2.16
CTCFP49711 AC093850.1-201ENST00000454121 251 ntBASIC1.54□□□□□ -2.16
CTCFP49711 RPL30P7-201ENST00000479312 323 ntBASIC1.54□□□□□ -2.16
CTCFP49711 RNU7-12P-201ENST00000516030 62 ntBASIC1.54□□□□□ -2.16
CTCFP49711 RNA5SP121-201ENST00000516537 101 ntBASIC1.54□□□□□ -2.16
CTCFP49711 MIR3937-201ENST00000580135 106 ntBASIC1.54□□□□□ -2.16
CTCFP49711 AL078604.3-201ENST00000615580 211 ntBASIC1.54□□□□□ -2.16
CTCFP49711 AC106754.2-201ENST00000623006 233 ntBASIC1.54□□□□□ -2.16
CTCFP49711 AP000648.3-201ENST00000623539 4507 ntBASIC1.54□□□□□ -2.16
CTCFP49711 RNU6-199P-201ENST00000362954 107 ntBASIC1.53□□□□□ -2.16
CTCFP49711 RNU6-763P-201ENST00000390865 106 ntBASIC1.53□□□□□ -2.16
CTCFP49711 SNORA53-201ENST00000391141 249 ntBASIC1.53□□□□□ -2.16
CTCFP49711 RNU6-955P-201ENST00000410497 104 ntBASIC1.53□□□□□ -2.16
CTCFP49711 SNX2P2-201ENST00000424553 323 ntBASIC1.53□□□□□ -2.16
CTCFP49711 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.53□□□□□ -2.16
CTCFP49711 MTND4LP30-201ENST00000454092 297 ntBASIC1.53□□□□□ -2.16
CTCFP49711 U8.19-201ENST00000459095 133 ntBASIC1.53□□□□□ -2.16
CTCFP49711 RPL39P38-201ENST00000467018 153 ntBASIC1.53□□□□□ -2.16
CTCFP49711 AC004223.1-201ENST00000479840 271 ntBASIC1.53□□□□□ -2.16
CTCFP49711 RPL23AP54-201ENST00000495129 419 ntBASIC1.53□□□□□ -2.16
CTCFP49711 AC091959.1-201ENST00000495857 238 ntBASIC1.53□□□□□ -2.16
CTCFP49711 CYCTP-201ENST00000504253 315 ntBASIC1.53□□□□□ -2.16
CTCFP49711 RNU6-635P-201ENST00000516651 102 ntBASIC1.53□□□□□ -2.16
CTCFP49711 AC036111.3-201ENST00000526389 112 ntBASIC1.53□□□□□ -2.16
CTCFP49711 AC120024.3-201ENST00000603167 156 ntBASIC1.53□□□□□ -2.16
CTCFP49711 AL109933.3-201ENST00000619095 188 ntBASIC1.53□□□□□ -2.16
CTCFP49711 AC134026.1-201ENST00000623249 2239 ntBASIC1.53□□□□□ -2.16
CTCFP49711 NAA50-211ENST00000630058 177 ntTSL 5 BASIC1.53□□□□□ -2.16
CTCFP49711 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.53□□□□□ -2.16
CTCFP49711 RNU6-833P-201ENST00000363486 107 ntBASIC1.52□□□□□ -2.17
CTCFP49711 Y_RNA.203-201ENST00000364106 102 ntBASIC1.52□□□□□ -2.17
CTCFP49711 Y_RNA.637-201ENST00000459424 114 ntBASIC1.52□□□□□ -2.17
CTCFP49711 RNU6-570P-201ENST00000517051 105 ntBASIC1.52□□□□□ -2.17
CTCFP49711 AC005357.1-201ENST00000588399 301 ntBASIC1.52□□□□□ -2.17
CTCFP49711 AC008737.2-201ENST00000599446 118 ntBASIC1.52□□□□□ -2.17
CTCFP49711 AL020996.3-201ENST00000606617 222 ntBASIC1.52□□□□□ -2.17
CTCFP49711 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC1.52□□□□□ -2.17
CTCFP49711 AC007742.2-201ENST00000618226 398 ntBASIC1.52□□□□□ -2.17
CTCFP49711 AC027279.3-201ENST00000625055 122 ntBASIC1.52□□□□□ -2.17
CTCFP49711 MIR924-201ENST00000638017 53 ntBASIC1.52□□□□□ -2.17
CTCFP49711 SNORA25.1-201ENST00000362326 128 ntBASIC1.51□□□□□ -2.17
CTCFP49711 MIR653-201ENST00000385279 96 ntBASIC1.51□□□□□ -2.17
CTCFP49711 AL078595.1-201ENST00000404458 226 ntBASIC1.51□□□□□ -2.17
CTCFP49711 SNORA36B-201ENST00000410438 131 ntBASIC1.51□□□□□ -2.17
CTCFP49711 PIGPP3-201ENST00000425307 415 ntBASIC1.51□□□□□ -2.17
CTCFP49711 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.51□□□□□ -2.17
CTCFP49711 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.51□□□□□ -2.17
CTCFP49711 RNU6-917P-201ENST00000516294 104 ntBASIC1.51□□□□□ -2.17
CTCFP49711 RNU6-1338P-201ENST00000516328 91 ntBASIC1.51□□□□□ -2.17
CTCFP49711 AC037487.3-201ENST00000606668 112 ntBASIC1.51□□□□□ -2.17
CTCFP49711 AP001282.2-201ENST00000616149 309 ntBASIC1.51□□□□□ -2.17
CTCFP49711 RNU6-1272P-201ENST00000362776 107 ntBASIC1.5□□□□□ -2.17
CTCFP49711 Y_RNA.376-201ENST00000365638 108 ntBASIC1.5□□□□□ -2.17
CTCFP49711 RNU6-969P-201ENST00000383900 105 ntBASIC1.5□□□□□ -2.17
CTCFP49711 RNU6-163P-201ENST00000384396 106 ntBASIC1.5□□□□□ -2.17
CTCFP49711 Y_RNA.574-201ENST00000384766 95 ntBASIC1.5□□□□□ -2.17
CTCFP49711 MIR150-201ENST00000385048 84 ntBASIC1.5□□□□□ -2.17
CTCFP49711 MIR891A-201ENST00000401237 79 ntBASIC1.5□□□□□ -2.17
CTCFP49711 MTCO2P33-201ENST00000402100 465 ntBASIC1.5□□□□□ -2.17
CTCFP49711 SNRPGP10-201ENST00000432323 225 ntBASIC1.5□□□□□ -2.17
CTCFP49711 RPS23P4-201ENST00000487908 423 ntBASIC1.5□□□□□ -2.17
CTCFP49711 AC114811.1-201ENST00000507207 168 ntBASIC1.5□□□□□ -2.17
CTCFP49711 SERF1AP1-201ENST00000514575 187 ntBASIC1.5□□□□□ -2.17
CTCFP49711 SCARNA15.1-201ENST00000516384 125 ntBASIC1.5□□□□□ -2.17
CTCFP49711 AL512310.8-201ENST00000550183 120 ntBASIC1.5□□□□□ -2.17
CTCFP49711 AL117187.1-201ENST00000555482 181 ntBASIC1.5□□□□□ -2.17
CTCFP49711 AL512605.2-201ENST00000592972 256 ntBASIC1.5□□□□□ -2.17
CTCFP49711 AC068700.1-201ENST00000565862 3754 ntBASIC1.49□□□□□ -2.17
CTCFP49711 RNU6-674P-201ENST00000363831 107 ntBASIC1.49□□□□□ -2.17
CTCFP49711 RNU6-899P-201ENST00000363947 107 ntBASIC1.49□□□□□ -2.17
CTCFP49711 Y_RNA.217-201ENST00000364214 105 ntBASIC1.49□□□□□ -2.17
CTCFP49711 RNU6-514P-201ENST00000384208 107 ntBASIC1.49□□□□□ -2.17
CTCFP49711 RNU6-662P-201ENST00000384253 104 ntBASIC1.49□□□□□ -2.17
CTCFP49711 RNU6-713P-201ENST00000384761 107 ntBASIC1.49□□□□□ -2.17
CTCFP49711 RNU6-437P-201ENST00000459408 95 ntBASIC1.49□□□□□ -2.17
CTCFP49711 Y_RNA.641-201ENST00000459414 105 ntBASIC1.49□□□□□ -2.17
CTCFP49711 TRBVB-201ENST00000477100 408 ntBASIC1.49□□□□□ -2.17
CTCFP49711 SNORA27.4-201ENST00000516650 95 ntBASIC1.49□□□□□ -2.17
CTCFP49711 RNA5SP330-201ENST00000517096 96 ntBASIC1.49□□□□□ -2.17
CTCFP49711 MIR3664-201ENST00000579074 99 ntBASIC1.49□□□□□ -2.17
CTCFP49711 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.49□□□□□ -2.17
CTCFP49711 MIR8062-201ENST00000621515 85 ntBASIC1.49□□□□□ -2.17
CTCFP49711 RNU6-238P-201ENST00000363313 106 ntBASIC1.48□□□□□ -2.17
CTCFP49711 RNU6-1209P-201ENST00000363655 107 ntBASIC1.48□□□□□ -2.17
CTCFP49711 MIR526A1-201ENST00000384897 85 ntBASIC1.48□□□□□ -2.17
CTCFP49711 SNORD41-201ENST00000386967 70 ntBASIC1.48□□□□□ -2.17
CTCFP49711 MLLT10P1-201ENST00000418346 262 ntBASIC1.48□□□□□ -2.17
CTCFP49711 AC087343.1-201ENST00000477341 475 ntBASIC1.48□□□□□ -2.17
CTCFP49711 DEFB108E-201ENST00000524692 240 ntBASIC1.48□□□□□ -2.17
CTCFP49711 AC090049.2-201ENST00000550377 109 ntBASIC1.48□□□□□ -2.17
CTCFP49711 MIR4295-201ENST00000585286 85 ntBASIC1.48□□□□□ -2.17
CTCFP49711 AL513534.2-201ENST00000603836 250 ntBASIC1.48□□□□□ -2.17
CTCFP49711 AL589743.1-201ENST00000551932 2712 ntBASIC1.47□□□□□ -2.17
CTCFP49711 UBE2WP1-201ENST00000362030 340 ntBASIC1.47□□□□□ -2.17
CTCFP49711 SNORA2.2-201ENST00000365473 135 ntBASIC1.47□□□□□ -2.17
CTCFP49711 MT-TW-201ENST00000387382 68 ntBASIC1.47□□□□□ -2.17
CTCFP49711 RNU6-131P-201ENST00000391144 107 ntBASIC1.47□□□□□ -2.17
CTCFP49711 AL358176.2-201ENST00000425769 204 ntBASIC1.47□□□□□ -2.17
CTCFP49711 SNORD45.4-201ENST00000516629 73 ntBASIC1.47□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms