Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 Y_RNA.804-201ENST00000615262 101 ntBASIC0.54□□□□□ -2.32
CX3CR1P49238 MIR4251-201ENST00000635819 61 ntBASIC0.54□□□□□ -2.32
CX3CR1P49238 MIR369-201ENST00000362155 70 ntBASIC0.53□□□□□ -2.32
CX3CR1P49238 Y_RNA.112-201ENST00000363250 102 ntBASIC0.53□□□□□ -2.32
CX3CR1P49238 SNORD14E-201ENST00000364009 85 ntBASIC0.53□□□□□ -2.32
CX3CR1P49238 Y_RNA.394-201ENST00000383942 103 ntBASIC0.53□□□□□ -2.32
CX3CR1P49238 Y_RNA.395-201ENST00000383945 109 ntBASIC0.53□□□□□ -2.32
CX3CR1P49238 RNU6-733P-201ENST00000410759 104 ntBASIC0.53□□□□□ -2.32
CX3CR1P49238 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.53□□□□□ -2.32
CX3CR1P49238 MTND4P19-201ENST00000446659 478 ntBASIC0.53□□□□□ -2.32
CX3CR1P49238 HSPE1P25-201ENST00000455484 251 ntBASIC0.53□□□□□ -2.32
CX3CR1P49238 RNU6-437P-201ENST00000459408 95 ntBASIC0.53□□□□□ -2.32
CX3CR1P49238 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC0.53□□□□□ -2.32
CX3CR1P49238 RNU6-191P-201ENST00000516295 94 ntBASIC0.53□□□□□ -2.32
CX3CR1P49238 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC0.53□□□□□ -2.32
CX3CR1P49238 AC004812.1-201ENST00000540773 146 ntBASIC0.53□□□□□ -2.32
CX3CR1P49238 RPL23AP91-201ENST00000569211 455 ntBASIC0.53□□□□□ -2.32
CX3CR1P49238 AC012433.1-201ENST00000588916 398 ntBASIC0.53□□□□□ -2.32
CX3CR1P49238 RNA5SP432-201ENST00000362480 116 ntBASIC0.52□□□□□ -2.33
CX3CR1P49238 RNU6-369P-201ENST00000362515 102 ntBASIC0.52□□□□□ -2.33
CX3CR1P49238 RNA5SP48-201ENST00000363969 126 ntBASIC0.52□□□□□ -2.33
CX3CR1P49238 SNORD42.2-201ENST00000365570 69 ntBASIC0.52□□□□□ -2.33
CX3CR1P49238 RNU6-21P-201ENST00000384710 107 ntBASIC0.52□□□□□ -2.33
CX3CR1P49238 MIR92A1-201ENST00000385233 78 ntBASIC0.52□□□□□ -2.33
CX3CR1P49238 MTCO2P33-201ENST00000402100 465 ntBASIC0.52□□□□□ -2.33
CX3CR1P49238 MIR1302-11-201ENST00000408051 138 ntBASIC0.52□□□□□ -2.33
CX3CR1P49238 RNU6ATAC19P-201ENST00000408096 110 ntBASIC0.52□□□□□ -2.33
CX3CR1P49238 MIR1302-9-201ENST00000408365 138 ntBASIC0.52□□□□□ -2.33
CX3CR1P49238 MIR1302-10-201ENST00000408734 138 ntBASIC0.52□□□□□ -2.33
CX3CR1P49238 RNU6-121P-201ENST00000410525 99 ntBASIC0.52□□□□□ -2.33
CX3CR1P49238 PMCHL1-202ENST00000423102 261 ntBASIC0.52□□□□□ -2.33
CX3CR1P49238 AC236972.2-201ENST00000434979 310 ntBASIC0.52□□□□□ -2.33
CX3CR1P49238 U8.19-201ENST00000459095 133 ntBASIC0.52□□□□□ -2.33
CX3CR1P49238 snoU13.21-201ENST00000459368 105 ntBASIC0.52□□□□□ -2.33
CX3CR1P49238 RNU4-57P-201ENST00000515980 135 ntBASIC0.52□□□□□ -2.33
CX3CR1P49238 RNU6-397P-201ENST00000516226 104 ntBASIC0.52□□□□□ -2.33
CX3CR1P49238 RNU6-830P-201ENST00000516353 107 ntBASIC0.52□□□□□ -2.33
CX3CR1P49238 RNU4-54P-201ENST00000516428 129 ntBASIC0.52□□□□□ -2.33
CX3CR1P49238 CYP3A137P-201ENST00000562436 69 ntBASIC0.52□□□□□ -2.33
CX3CR1P49238 MIR548AO-201ENST00000579992 96 ntBASIC0.52□□□□□ -2.33
CX3CR1P49238 MIR4300-201ENST00000581016 96 ntBASIC0.52□□□□□ -2.33
CX3CR1P49238 AC025627.3-201ENST00000582078 182 ntBASIC0.52□□□□□ -2.33
CX3CR1P49238 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC0.52□□□□□ -2.33
CX3CR1P49238 RAC1P9-201ENST00000604990 392 ntBASIC0.52□□□□□ -2.33
CX3CR1P49238 LARP7P1-201ENST00000605576 316 ntBASIC0.52□□□□□ -2.33
CX3CR1P49238 MIR1302-2-201ENST00000607096 138 ntBASIC0.52□□□□□ -2.33
CX3CR1P49238 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC0.52□□□□□ -2.33
CX3CR1P49238 Pinc.1-201ENST00000616452 154 ntBASIC0.52□□□□□ -2.33
CX3CR1P49238 7SK.10-201ENST00000621414 298 ntBASIC0.52□□□□□ -2.33
CX3CR1P49238 MTND4P29-201ENST00000503122 1372 ntBASIC0.52□□□□□ -2.33
CX3CR1P49238 SNORD113-8-201ENST00000363497 74 ntBASIC0.51□□□□□ -2.33
CX3CR1P49238 RNU6-674P-201ENST00000363831 107 ntBASIC0.51□□□□□ -2.33
CX3CR1P49238 SNORD45.3-201ENST00000363836 72 ntBASIC0.51□□□□□ -2.33
CX3CR1P49238 RNU6-450P-201ENST00000364654 107 ntBASIC0.51□□□□□ -2.33
CX3CR1P49238 Y_RNA.494-201ENST00000384432 111 ntBASIC0.51□□□□□ -2.33
CX3CR1P49238 MIR520E-201ENST00000384867 87 ntBASIC0.51□□□□□ -2.33
CX3CR1P49238 MIR15B-201ENST00000385045 98 ntBASIC0.51□□□□□ -2.33
CX3CR1P49238 RNU6-763P-201ENST00000390865 106 ntBASIC0.51□□□□□ -2.33
CX3CR1P49238 U8.17-201ENST00000391292 132 ntBASIC0.51□□□□□ -2.33
CX3CR1P49238 AC098869.1-201ENST00000481627 292 ntBASIC0.51□□□□□ -2.33
CX3CR1P49238 MRPS35P2-201ENST00000508242 191 ntBASIC0.51□□□□□ -2.33
CX3CR1P49238 RNU6-764P-201ENST00000516396 105 ntBASIC0.51□□□□□ -2.33
CX3CR1P49238 Y_RNA.715-201ENST00000517082 110 ntBASIC0.51□□□□□ -2.33
CX3CR1P49238 AC104695.3-201ENST00000604052 296 ntBASIC0.51□□□□□ -2.33
CX3CR1P49238 JPX_2.1-201ENST00000614161 69 ntBASIC0.51□□□□□ -2.33
CX3CR1P49238 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.5□□□□□ -2.33
CX3CR1P49238 RNU6-442P-201ENST00000383968 104 ntBASIC0.5□□□□□ -2.33
CX3CR1P49238 Y_RNA.509-201ENST00000384506 99 ntBASIC0.5□□□□□ -2.33
CX3CR1P49238 MIR1276-201ENST00000408707 83 ntBASIC0.5□□□□□ -2.33
CX3CR1P49238 RNU6-383P-201ENST00000410864 94 ntBASIC0.5□□□□□ -2.33
CX3CR1P49238 AC090844.1-201ENST00000422019 156 ntBASIC0.5□□□□□ -2.33
CX3CR1P49238 POLR2KP2-201ENST00000438155 177 ntBASIC0.5□□□□□ -2.33
CX3CR1P49238 Y_RNA.638-201ENST00000459374 113 ntBASIC0.5□□□□□ -2.33
CX3CR1P49238 Y_RNA.637-201ENST00000459424 114 ntBASIC0.5□□□□□ -2.33
CX3CR1P49238 RNU2-13P-201ENST00000515909 113 ntBASIC0.5□□□□□ -2.33
CX3CR1P49238 RNU6-475P-201ENST00000516073 104 ntBASIC0.5□□□□□ -2.33
CX3CR1P49238 RNU6-496P-201ENST00000516145 99 ntBASIC0.5□□□□□ -2.33
CX3CR1P49238 AP003484.1-201ENST00000530974 250 ntBASIC0.5□□□□□ -2.33
CX3CR1P49238 AC006441.5-201ENST00000612680 209 ntBASIC0.5□□□□□ -2.33
CX3CR1P49238 AL138825.1-201ENST00000618587 192 ntBASIC0.5□□□□□ -2.33
CX3CR1P49238 uc_338.17-201ENST00000619633 179 ntBASIC0.5□□□□□ -2.33
CX3CR1P49238 MTND1P7-201ENST00000632801 297 ntBASIC0.5□□□□□ -2.33
CX3CR1P49238 SNORD114-22-201ENST00000365423 72 ntBASIC0.49□□□□□ -2.33
CX3CR1P49238 RNU6-474P-201ENST00000384243 107 ntBASIC0.49□□□□□ -2.33
CX3CR1P49238 SNORD38C-201ENST00000384381 69 ntBASIC0.49□□□□□ -2.33
CX3CR1P49238 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC0.49□□□□□ -2.33
CX3CR1P49238 SNORD115-46-201ENST00000390982 71 ntBASIC0.49□□□□□ -2.33
CX3CR1P49238 Y_RNA.602-201ENST00000410535 92 ntBASIC0.49□□□□□ -2.33
CX3CR1P49238 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC0.49□□□□□ -2.33
CX3CR1P49238 AC244098.3-201ENST00000424803 96 ntBASIC0.49□□□□□ -2.33
CX3CR1P49238 Y_RNA.639-201ENST00000458981 102 ntBASIC0.49□□□□□ -2.33
CX3CR1P49238 SEPT14P8-201ENST00000508026 178 ntBASIC0.49□□□□□ -2.33
CX3CR1P49238 RNA5SP121-201ENST00000516537 101 ntBASIC0.49□□□□□ -2.33
CX3CR1P49238 RNU6-897P-201ENST00000517135 105 ntBASIC0.49□□□□□ -2.33
CX3CR1P49238 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC0.49□□□□□ -2.33
CX3CR1P49238 MIR3124-201ENST00000582636 67 ntBASIC0.49□□□□□ -2.33
CX3CR1P49238 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC0.49□□□□□ -2.33
CX3CR1P49238 SNORD113-5-201ENST00000607261 78 ntBASIC0.49□□□□□ -2.33
CX3CR1P49238 AL021707.8-201ENST00000609428 183 ntBASIC0.49□□□□□ -2.33
CX3CR1P49238 AC015726.2-201ENST00000620112 122 ntBASIC0.49□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 145.6 ms