Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 RNU5F-3P-201ENST00000363767 117 ntBASIC-1.6□□□□□ -2.67
SNCAP37840 Y_RNA.243-201ENST00000364481 109 ntBASIC-1.6□□□□□ -2.67
SNCAP37840 RNU4-66P-201ENST00000365199 138 ntBASIC-1.6□□□□□ -2.67
SNCAP37840 RNU6-1029P-201ENST00000384109 107 ntBASIC-1.6□□□□□ -2.67
SNCAP37840 Y_RNA.518-201ENST00000384552 113 ntBASIC-1.6□□□□□ -2.67
SNCAP37840 RNU6-325P-201ENST00000411132 105 ntBASIC-1.6□□□□□ -2.67
SNCAP37840 AC105417.1-201ENST00000514691 285 ntBASIC-1.6□□□□□ -2.67
SNCAP37840 RNU6-966P-201ENST00000516479 104 ntBASIC-1.6□□□□□ -2.67
SNCAP37840 MIR3115-201ENST00000577915 68 ntBASIC-1.6□□□□□ -2.67
SNCAP37840 AL121757.2-201ENST00000611223 313 ntBASIC-1.6□□□□□ -2.67
SNCAP37840 Y_RNA.172-201ENST00000363765 102 ntBASIC-1.61□□□□□ -2.67
SNCAP37840 RNA5SP192-201ENST00000364404 120 ntBASIC-1.61□□□□□ -2.67
SNCAP37840 RNU6-30P-201ENST00000384561 107 ntBASIC-1.61□□□□□ -2.67
SNCAP37840 RPL30P15-201ENST00000457129 321 ntBASIC-1.61□□□□□ -2.67
SNCAP37840 U8.19-201ENST00000459095 133 ntBASIC-1.61□□□□□ -2.67
SNCAP37840 U8.22-201ENST00000459141 133 ntBASIC-1.61□□□□□ -2.67
SNCAP37840 Y_RNA.683-201ENST00000516508 93 ntBASIC-1.61□□□□□ -2.67
SNCAP37840 AP000676.1-201ENST00000533307 52 ntBASIC-1.61□□□□□ -2.67
SNCAP37840 AC080013.3-201ENST00000606839 578 ntBASIC-1.61□□□□□ -2.67
SNCAP37840 AL512506.1-201ENST00000613918 449 ntBASIC-1.61□□□□□ -2.67
SNCAP37840 MIR410-201ENST00000362222 80 ntBASIC-1.62□□□□□ -2.67
SNCAP37840 SNORD115-34-201ENST00000362441 82 ntBASIC-1.62□□□□□ -2.67
SNCAP37840 SNORD115-12-201ENST00000362583 82 ntBASIC-1.62□□□□□ -2.67
SNCAP37840 SNORD115-29-201ENST00000362834 82 ntBASIC-1.62□□□□□ -2.67
SNCAP37840 SNORD115-9-201ENST00000362912 82 ntBASIC-1.62□□□□□ -2.67
SNCAP37840 SNORD115-21-201ENST00000362963 81 ntBASIC-1.62□□□□□ -2.67
SNCAP37840 SNORD115-14-201ENST00000363090 81 ntBASIC-1.62□□□□□ -2.67
SNCAP37840 SNORD115-13-201ENST00000363358 82 ntBASIC-1.62□□□□□ -2.67
SNCAP37840 SNORD115-41-201ENST00000363608 82 ntBASIC-1.62□□□□□ -2.67
SNCAP37840 SNORD115-11-201ENST00000363616 82 ntBASIC-1.62□□□□□ -2.67
SNCAP37840 SNORD115-5-201ENST00000363633 82 ntBASIC-1.62□□□□□ -2.67
SNCAP37840 SNORD115-39-201ENST00000363694 82 ntBASIC-1.62□□□□□ -2.67
SNCAP37840 SNORD115-4-201ENST00000363810 82 ntBASIC-1.62□□□□□ -2.67
SNCAP37840 SNORD115-16-201ENST00000363887 82 ntBASIC-1.62□□□□□ -2.67
SNCAP37840 SNORD115-6-201ENST00000363942 82 ntBASIC-1.62□□□□□ -2.67
SNCAP37840 SNORD115-42-201ENST00000364273 82 ntBASIC-1.62□□□□□ -2.67
SNCAP37840 SNORD115-15-201ENST00000364809 81 ntBASIC-1.62□□□□□ -2.67
SNCAP37840 SNORD115-1-201ENST00000364961 82 ntBASIC-1.62□□□□□ -2.67
SNCAP37840 SNORD115-26-201ENST00000365067 82 ntBASIC-1.62□□□□□ -2.67
SNCAP37840 SNORD115-10-201ENST00000365073 81 ntBASIC-1.62□□□□□ -2.67
SNCAP37840 SNORD115-43-201ENST00000365503 82 ntBASIC-1.62□□□□□ -2.67
SNCAP37840 SNORD115-36-201ENST00000365629 82 ntBASIC-1.62□□□□□ -2.67
SNCAP37840 SNORD24-201ENST00000383884 75 ntBASIC-1.62□□□□□ -2.67
SNCAP37840 Y_RNA.472-201ENST00000384322 102 ntBASIC-1.62□□□□□ -2.67
SNCAP37840 MIR587-201ENST00000384845 96 ntBASIC-1.62□□□□□ -2.67
SNCAP37840 RNU6-1250P-201ENST00000391218 107 ntBASIC-1.62□□□□□ -2.67
SNCAP37840 AC074085.1-201ENST00000413598 418 ntBASIC-1.62□□□□□ -2.67
SNCAP37840 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC-1.62□□□□□ -2.67
SNCAP37840 DEFB131E-201ENST00000532329 154 ntBASIC-1.62□□□□□ -2.67
SNCAP37840 AP000942.4-201ENST00000604811 241 ntBASIC-1.62□□□□□ -2.67
SNCAP37840 SNORD115-40-201ENST00000606510 82 ntBASIC-1.62□□□□□ -2.67
SNCAP37840 AC145423.2-201ENST00000610631 239 ntBASIC-1.62□□□□□ -2.67
SNCAP37840 AL603910.2-201ENST00000407268 136 ntBASIC-1.63□□□□□ -2.67
SNCAP37840 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC-1.63□□□□□ -2.67
SNCAP37840 UBE2D3P4-201ENST00000441973 436 ntBASIC-1.63□□□□□ -2.67
SNCAP37840 snoU13.11-201ENST00000459219 104 ntBASIC-1.63□□□□□ -2.67
SNCAP37840 MTCO1P29-201ENST00000496868 288 ntBASIC-1.63□□□□□ -2.67
SNCAP37840 SNORD27.1-201ENST00000516319 72 ntBASIC-1.63□□□□□ -2.67
SNCAP37840 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-1.63□□□□□ -2.67
SNCAP37840 MIR3165-201ENST00000579874 75 ntBASIC-1.63□□□□□ -2.67
SNCAP37840 MIR548AE1-201ENST00000583292 70 ntBASIC-1.63□□□□□ -2.67
SNCAP37840 AC008507.4-201ENST00000585464 127 ntBASIC-1.63□□□□□ -2.67
SNCAP37840 AL354950.2-201ENST00000617939 290 ntBASIC-1.63□□□□□ -2.67
SNCAP37840 AL121895.2-201ENST00000619558 447 ntBASIC-1.63□□□□□ -2.67
SNCAP37840 Y_RNA.110-201ENST00000363220 99 ntBASIC-1.64□□□□□ -2.67
SNCAP37840 RNU1-141P-201ENST00000364623 158 ntBASIC-1.64□□□□□ -2.67
SNCAP37840 RNU6-597P-201ENST00000365620 102 ntBASIC-1.64□□□□□ -2.67
SNCAP37840 RNU6-74P-201ENST00000384235 107 ntBASIC-1.64□□□□□ -2.67
SNCAP37840 SNORA72-201ENST00000384339 132 ntBASIC-1.64□□□□□ -2.67
SNCAP37840 MRPL42P2-201ENST00000403169 426 ntBASIC-1.64□□□□□ -2.67
SNCAP37840 DLGAP5P1-201ENST00000430307 464 ntBASIC-1.64□□□□□ -2.67
SNCAP37840 MIR4703-201ENST00000577728 79 ntBASIC-1.64□□□□□ -2.67
SNCAP37840 AL391262.2-201ENST00000622466 494 ntBASIC-1.64□□□□□ -2.67
SNCAP37840 Y_RNA.241-201ENST00000364470 117 ntBASIC-1.65□□□□□ -2.67
SNCAP37840 SNORD116.1-201ENST00000365628 92 ntBASIC-1.65□□□□□ -2.67
SNCAP37840 RNU6-1201P-201ENST00000384227 107 ntBASIC-1.65□□□□□ -2.67
SNCAP37840 RNU4-55P-201ENST00000410731 137 ntBASIC-1.65□□□□□ -2.67
SNCAP37840 USP9YP16-201ENST00000430287 407 ntBASIC-1.65□□□□□ -2.67
SNCAP37840 CLPTM1LP1-201ENST00000604519 484 ntBASIC-1.65□□□□□ -2.67
SNCAP37840 uc_338.11-201ENST00000619132 160 ntBASIC-1.65□□□□□ -2.67
SNCAP37840 RNU4-28P-201ENST00000364739 141 ntBASIC-1.66□□□□□ -2.68
SNCAP37840 RNU6-1062P-201ENST00000383908 107 ntBASIC-1.66□□□□□ -2.68
SNCAP37840 Y_RNA.439-201ENST00000384119 94 ntBASIC-1.66□□□□□ -2.68
SNCAP37840 RNU6-533P-201ENST00000384144 107 ntBASIC-1.66□□□□□ -2.68
SNCAP37840 RNU6-281P-201ENST00000384212 103 ntBASIC-1.66□□□□□ -2.68
SNCAP37840 Y_RNA.547-201ENST00000384654 119 ntBASIC-1.66□□□□□ -2.68
SNCAP37840 RNU6-541P-201ENST00000384709 110 ntBASIC-1.66□□□□□ -2.68
SNCAP37840 MIR521-1-201ENST00000384902 87 ntBASIC-1.66□□□□□ -2.68
SNCAP37840 SNORD72-201ENST00000390994 80 ntBASIC-1.66□□□□□ -2.68
SNCAP37840 Y_RNA.608-201ENST00000410647 95 ntBASIC-1.66□□□□□ -2.68
SNCAP37840 AC016550.1-201ENST00000505348 785 ntBASIC-1.66□□□□□ -2.68
SNCAP37840 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC-1.66□□□□□ -2.68
SNCAP37840 RNU6-1012P-201ENST00000516606 109 ntBASIC-1.66□□□□□ -2.68
SNCAP37840 RNU6-531P-201ENST00000516694 104 ntBASIC-1.66□□□□□ -2.68
SNCAP37840 AC104576.1-201ENST00000524225 88 ntBASIC-1.66□□□□□ -2.68
SNCAP37840 AC141846.1-201ENST00000568348 142 ntBASIC-1.66□□□□□ -2.68
SNCAP37840 AC005771.1-201ENST00000585581 349 ntBASIC-1.66□□□□□ -2.68
SNCAP37840 AC027807.2-201ENST00000616099 408 ntBASIC-1.66□□□□□ -2.68
SNCAP37840 Y_RNA.598-201ENST00000410480 95 ntBASIC-1.67□□□□□ -2.68
SNCAP37840 RNU7-53P-201ENST00000516705 60 ntBASIC-1.67□□□□□ -2.68
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms