Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 Y_RNA.142-201ENST00000363491 102 ntBASIC0.5□□□□□ -2.33
RORAP35398 RNU6-268P-201ENST00000364174 107 ntBASIC0.5□□□□□ -2.33
RORAP35398 SNORD113.3-201ENST00000364630 78 ntBASIC0.5□□□□□ -2.33
RORAP35398 RNU6-1283P-201ENST00000365314 105 ntBASIC0.5□□□□□ -2.33
RORAP35398 Y_RNA.462-201ENST00000384268 102 ntBASIC0.5□□□□□ -2.33
RORAP35398 MIR1827-201ENST00000408549 66 ntBASIC0.5□□□□□ -2.33
RORAP35398 MIR1278-201ENST00000408753 81 ntBASIC0.5□□□□□ -2.33
RORAP35398 RNU6-613P-201ENST00000410412 108 ntBASIC0.5□□□□□ -2.33
RORAP35398 HMGN1P10-201ENST00000474557 553 ntBASIC0.5□□□□□ -2.33
RORAP35398 RNU6-496P-201ENST00000516145 99 ntBASIC0.5□□□□□ -2.33
RORAP35398 RNU6-830P-201ENST00000516353 107 ntBASIC0.5□□□□□ -2.33
RORAP35398 RNU4-77P-201ENST00000516692 156 ntBASIC0.5□□□□□ -2.33
RORAP35398 AP003484.1-201ENST00000530974 250 ntBASIC0.5□□□□□ -2.33
RORAP35398 AL355375.2-201ENST00000574825 175 ntBASIC0.5□□□□□ -2.33
RORAP35398 MIR5188-201ENST00000583467 113 ntBASIC0.5□□□□□ -2.33
RORAP35398 MIR548AY-201ENST00000617669 107 ntBASIC0.5□□□□□ -2.33
RORAP35398 MIR1302-1-201ENST00000637932 143 ntBASIC0.5□□□□□ -2.33
RORAP35398 SNORD18A-201ENST00000363753 72 ntBASIC0.49□□□□□ -2.33
RORAP35398 RNU6-1048P-201ENST00000364054 107 ntBASIC0.49□□□□□ -2.33
RORAP35398 SNORD72-201ENST00000390994 80 ntBASIC0.49□□□□□ -2.33
RORAP35398 AL603910.2-201ENST00000407268 136 ntBASIC0.49□□□□□ -2.33
RORAP35398 RNU2-14P-201ENST00000411053 191 ntBASIC0.49□□□□□ -2.33
RORAP35398 RPL23AP54-201ENST00000495129 419 ntBASIC0.49□□□□□ -2.33
RORAP35398 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC0.49□□□□□ -2.33
RORAP35398 AC008507.4-201ENST00000585464 127 ntBASIC0.49□□□□□ -2.33
RORAP35398 AC087685.1-201ENST00000587507 141 ntBASIC0.49□□□□□ -2.33
RORAP35398 SNORD58B-201ENST00000607313 66 ntBASIC0.49□□□□□ -2.33
RORAP35398 DLEU2_2.2-201ENST00000615474 90 ntBASIC0.49□□□□□ -2.33
RORAP35398 Pinc.1-201ENST00000616452 154 ntBASIC0.49□□□□□ -2.33
RORAP35398 MIR6779-201ENST00000617283 64 ntBASIC0.49□□□□□ -2.33
RORAP35398 AC243829.3-201ENST00000622177 108 ntBASIC0.49□□□□□ -2.33
RORAP35398 AL589743.1-201ENST00000551932 2712 ntBASIC0.49□□□□□ -2.33
RORAP35398 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.48□□□□□ -2.33
RORAP35398 RNY1P8-201ENST00000383970 114 ntBASIC0.48□□□□□ -2.33
RORAP35398 SNORD38C-201ENST00000384381 69 ntBASIC0.48□□□□□ -2.33
RORAP35398 RNY1P4-201ENST00000384595 115 ntBASIC0.48□□□□□ -2.33
RORAP35398 RNU6-1067P-201ENST00000384752 107 ntBASIC0.48□□□□□ -2.33
RORAP35398 RNU1-119P-201ENST00000391122 165 ntBASIC0.48□□□□□ -2.33
RORAP35398 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.48□□□□□ -2.33
RORAP35398 RNU4-30P-201ENST00000410245 143 ntBASIC0.48□□□□□ -2.33
RORAP35398 MTND1P14-201ENST00000427400 950 ntBASIC0.48□□□□□ -2.33
RORAP35398 AC005534.2-201ENST00000431047 433 ntBASIC0.48□□□□□ -2.33
RORAP35398 SNORD116.3-201ENST00000517176 78 ntBASIC0.48□□□□□ -2.33
RORAP35398 AC018659.1-201ENST00000551083 169 ntBASIC0.48□□□□□ -2.33
RORAP35398 MIR548AO-201ENST00000579992 96 ntBASIC0.48□□□□□ -2.33
RORAP35398 AC012433.1-201ENST00000588916 398 ntBASIC0.48□□□□□ -2.33
RORAP35398 AC007742.2-201ENST00000618226 398 ntBASIC0.48□□□□□ -2.33
RORAP35398 SNORD45.3-201ENST00000363836 72 ntBASIC0.47□□□□□ -2.33
RORAP35398 RNU6-442P-201ENST00000383968 104 ntBASIC0.47□□□□□ -2.33
RORAP35398 Y_RNA.428-201ENST00000384078 102 ntBASIC0.47□□□□□ -2.33
RORAP35398 RNU6-937P-201ENST00000384325 106 ntBASIC0.47□□□□□ -2.33
RORAP35398 SNORA2B-201ENST00000384583 137 ntBASIC0.47□□□□□ -2.33
RORAP35398 Y_RNA.551-201ENST00000384661 102 ntBASIC0.47□□□□□ -2.33
RORAP35398 U8.17-201ENST00000391292 132 ntBASIC0.47□□□□□ -2.33
RORAP35398 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.47□□□□□ -2.33
RORAP35398 Y_RNA.632-201ENST00000459189 102 ntBASIC0.47□□□□□ -2.33
RORAP35398 RNU6-229P-201ENST00000516614 102 ntBASIC0.47□□□□□ -2.33
RORAP35398 RNU7-181P-201ENST00000517234 74 ntBASIC0.47□□□□□ -2.33
RORAP35398 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC0.47□□□□□ -2.33
RORAP35398 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC0.47□□□□□ -2.33
RORAP35398 AC011195.1-201ENST00000578177 177 ntBASIC0.47□□□□□ -2.33
RORAP35398 AC092447.9-201ENST00000603395 144 ntBASIC0.47□□□□□ -2.33
RORAP35398 JPX_2.1-201ENST00000614161 69 ntBASIC0.47□□□□□ -2.33
RORAP35398 Y_RNA.5-201ENST00000362334 102 ntBASIC0.46□□□□□ -2.34
RORAP35398 Y_RNA.80-201ENST00000362996 102 ntBASIC0.46□□□□□ -2.34
RORAP35398 Y_RNA.168-201ENST00000363740 102 ntBASIC0.46□□□□□ -2.34
RORAP35398 Y_RNA.187-201ENST00000363918 113 ntBASIC0.46□□□□□ -2.34
RORAP35398 RNU6-801P-201ENST00000364087 105 ntBASIC0.46□□□□□ -2.34
RORAP35398 RNU4-50P-201ENST00000364361 141 ntBASIC0.46□□□□□ -2.34
RORAP35398 Y_RNA.813-201ENST00000364639 102 ntBASIC0.46□□□□□ -2.34
RORAP35398 Y_RNA.370-201ENST00000365589 108 ntBASIC0.46□□□□□ -2.34
RORAP35398 RNU6-945P-201ENST00000383947 107 ntBASIC0.46□□□□□ -2.34
RORAP35398 SNORD63-201ENST00000384262 68 ntBASIC0.46□□□□□ -2.34
RORAP35398 Y_RNA.485-201ENST00000384395 102 ntBASIC0.46□□□□□ -2.34
RORAP35398 SNORD105-201ENST00000386910 85 ntBASIC0.46□□□□□ -2.34
RORAP35398 MTCO2P33-201ENST00000402100 465 ntBASIC0.46□□□□□ -2.34
RORAP35398 SNORD11-201ENST00000459124 84 ntBASIC0.46□□□□□ -2.34
RORAP35398 RNU7-141P-201ENST00000459304 62 ntBASIC0.46□□□□□ -2.34
RORAP35398 snoU13.21-201ENST00000459368 105 ntBASIC0.46□□□□□ -2.34
RORAP35398 RNU2-13P-201ENST00000515909 113 ntBASIC0.46□□□□□ -2.34
RORAP35398 RNU4-57P-201ENST00000515980 135 ntBASIC0.46□□□□□ -2.34
RORAP35398 Y_RNA.661-201ENST00000516003 99 ntBASIC0.46□□□□□ -2.34
RORAP35398 RNU7-110P-201ENST00000516891 62 ntBASIC0.46□□□□□ -2.34
RORAP35398 AL121655.1-201ENST00000605811 308 ntBASIC0.46□□□□□ -2.34
RORAP35398 Y_RNA.772-201ENST00000606692 102 ntBASIC0.46□□□□□ -2.34
RORAP35398 AC011373.1-201ENST00000607270 237 ntBASIC0.46□□□□□ -2.34
RORAP35398 MTND1P7-201ENST00000632801 297 ntBASIC0.46□□□□□ -2.34
RORAP35398 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.45□□□□□ -2.34
RORAP35398 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.45□□□□□ -2.34
RORAP35398 SNORD114-23-201ENST00000363536 72 ntBASIC0.45□□□□□ -2.34
RORAP35398 RNU6-674P-201ENST00000363831 107 ntBASIC0.45□□□□□ -2.34
RORAP35398 Y_RNA.286-201ENST00000364813 102 ntBASIC0.45□□□□□ -2.34
RORAP35398 MIR802-201ENST00000390235 94 ntBASIC0.45□□□□□ -2.34
RORAP35398 RNU6-130P-201ENST00000411112 103 ntBASIC0.45□□□□□ -2.34
RORAP35398 AC114737.2-201ENST00000421583 173 ntBASIC0.45□□□□□ -2.34
RORAP35398 AL157398.1-201ENST00000452981 186 ntBASIC0.45□□□□□ -2.34
RORAP35398 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC0.45□□□□□ -2.34
RORAP35398 RNU6-437P-201ENST00000459408 95 ntBASIC0.45□□□□□ -2.34
RORAP35398 SNORD19B-201ENST00000459623 84 ntBASIC0.45□□□□□ -2.34
RORAP35398 MIR2115-201ENST00000516657 100 ntBASIC0.45□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms