Protein–RNA interactions for Protein: P29074

PTPN4, Tyrosine-protein phosphatase non-receptor type 4, humanhuman

Predictions only

Length 926 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4P29074 SNORA40.15-201ENST00000516884 107 ntBASIC0.97□□□□□ -2.25
PTPN4P29074 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC0.97□□□□□ -2.25
PTPN4P29074 MIR151B-201ENST00000584249 96 ntBASIC0.97□□□□□ -2.25
PTPN4P29074 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.97□□□□□ -2.25
PTPN4P29074 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.97□□□□□ -2.25
PTPN4P29074 snoU2_19.2-201ENST00000363024 80 ntBASIC0.96□□□□□ -2.26
PTPN4P29074 RNU6-770P-201ENST00000363929 105 ntBASIC0.96□□□□□ -2.26
PTPN4P29074 Y_RNA.210-201ENST00000364161 110 ntBASIC0.96□□□□□ -2.26
PTPN4P29074 snoU2-30.1-201ENST00000365012 70 ntBASIC0.96□□□□□ -2.26
PTPN4P29074 Y_RNA.569-201ENST00000384749 103 ntBASIC0.96□□□□□ -2.26
PTPN4P29074 MIR200A-201ENST00000384875 90 ntBASIC0.96□□□□□ -2.26
PTPN4P29074 RNU6-910P-201ENST00000390844 107 ntBASIC0.96□□□□□ -2.26
PTPN4P29074 MIR548J-201ENST00000408833 112 ntBASIC0.96□□□□□ -2.26
PTPN4P29074 SNORA36B-201ENST00000410438 131 ntBASIC0.96□□□□□ -2.26
PTPN4P29074 POLR2J4-204ENST00000418424 324 ntBASIC0.96□□□□□ -2.26
PTPN4P29074 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC0.96□□□□□ -2.26
PTPN4P29074 MTCO1P5-201ENST00000433573 344 ntBASIC0.96□□□□□ -2.26
PTPN4P29074 HMGN2P32-201ENST00000444648 269 ntBASIC0.96□□□□□ -2.26
PTPN4P29074 AC048334.1-201ENST00000477975 159 ntBASIC0.96□□□□□ -2.26
PTPN4P29074 AC098869.1-201ENST00000481627 292 ntBASIC0.96□□□□□ -2.26
PTPN4P29074 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.96□□□□□ -2.26
PTPN4P29074 RNU6-947P-201ENST00000516264 106 ntBASIC0.96□□□□□ -2.26
PTPN4P29074 RNU6-764P-201ENST00000516396 105 ntBASIC0.96□□□□□ -2.26
PTPN4P29074 RNU6-1137P-201ENST00000517073 99 ntBASIC0.96□□□□□ -2.26
PTPN4P29074 RNU6-1223P-201ENST00000517124 104 ntBASIC0.96□□□□□ -2.26
PTPN4P29074 AC090142.3-201ENST00000519012 385 ntBASIC0.96□□□□□ -2.26
PTPN4P29074 AC022709.1-201ENST00000615967 87 ntBASIC0.96□□□□□ -2.26
PTPN4P29074 AC007742.2-201ENST00000618226 398 ntBASIC0.96□□□□□ -2.26
PTPN4P29074 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
PTPN4P29074 RNU6-1209P-201ENST00000363655 107 ntBASIC0.95□□□□□ -2.26
PTPN4P29074 RNU6-674P-201ENST00000363831 107 ntBASIC0.95□□□□□ -2.26
PTPN4P29074 RNY1-201ENST00000364228 113 ntBASIC0.95□□□□□ -2.26
PTPN4P29074 RNU6-1187P-201ENST00000364771 110 ntBASIC0.95□□□□□ -2.26
PTPN4P29074 RNU6-806P-201ENST00000365147 105 ntBASIC0.95□□□□□ -2.26
PTPN4P29074 RNU6-290P-201ENST00000365212 101 ntBASIC0.95□□□□□ -2.26
PTPN4P29074 SNORA33.2-201ENST00000365413 134 ntBASIC0.95□□□□□ -2.26
PTPN4P29074 MIR516B2-201ENST00000385190 85 ntBASIC0.95□□□□□ -2.26
PTPN4P29074 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.95□□□□□ -2.26
PTPN4P29074 RPL21P38-201ENST00000418090 167 ntBASIC0.95□□□□□ -2.26
PTPN4P29074 AC063976.4-201ENST00000421971 163 ntBASIC0.95□□□□□ -2.26
PTPN4P29074 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.95□□□□□ -2.26
PTPN4P29074 RNU6-437P-201ENST00000459408 95 ntBASIC0.95□□□□□ -2.26
PTPN4P29074 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC0.95□□□□□ -2.26
PTPN4P29074 SNORD111.1-201ENST00000516421 86 ntBASIC0.95□□□□□ -2.26
PTPN4P29074 RNU6-1153P-201ENST00000516760 105 ntBASIC0.95□□□□□ -2.26
PTPN4P29074 AC005357.1-201ENST00000588399 301 ntBASIC0.95□□□□□ -2.26
PTPN4P29074 AL096861.1-201ENST00000610899 123 ntBASIC0.95□□□□□ -2.26
PTPN4P29074 AC134026.1-201ENST00000623249 2239 ntBASIC0.95□□□□□ -2.26
PTPN4P29074 Y_RNA.11-201ENST00000362375 109 ntBASIC0.94□□□□□ -2.26
PTPN4P29074 Y_RNA.19-201ENST00000362462 99 ntBASIC0.94□□□□□ -2.26
PTPN4P29074 Y_RNA.26-201ENST00000362539 101 ntBASIC0.94□□□□□ -2.26
PTPN4P29074 Y_RNA.153-201ENST00000363615 91 ntBASIC0.94□□□□□ -2.26
PTPN4P29074 RNU4-38P-201ENST00000364472 129 ntBASIC0.94□□□□□ -2.26
PTPN4P29074 SNORD114-24-201ENST00000365029 72 ntBASIC0.94□□□□□ -2.26
PTPN4P29074 RNU6-1227P-201ENST00000383981 107 ntBASIC0.94□□□□□ -2.26
PTPN4P29074 Y_RNA.541-201ENST00000384640 113 ntBASIC0.94□□□□□ -2.26
PTPN4P29074 MIR215-201ENST00000384858 110 ntBASIC0.94□□□□□ -2.26
PTPN4P29074 MIR136-201ENST00000385207 82 ntBASIC0.94□□□□□ -2.26
PTPN4P29074 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.94□□□□□ -2.26
PTPN4P29074 NDUFA4P2-201ENST00000489989 244 ntBASIC0.94□□□□□ -2.26
PTPN4P29074 MRPS35P2-201ENST00000508242 191 ntBASIC0.94□□□□□ -2.26
PTPN4P29074 RNY3P15-201ENST00000516297 97 ntBASIC0.94□□□□□ -2.26
PTPN4P29074 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC0.94□□□□□ -2.26
PTPN4P29074 JPX_2.1-201ENST00000614161 69 ntBASIC0.94□□□□□ -2.26
PTPN4P29074 AL442644.1-201ENST00000454390 3105 ntBASIC0.93□□□□□ -2.26
PTPN4P29074 RNU6-763P-201ENST00000390865 106 ntBASIC0.93□□□□□ -2.26
PTPN4P29074 MTCO2P33-201ENST00000402100 465 ntBASIC0.93□□□□□ -2.26
PTPN4P29074 AC005534.2-201ENST00000431047 433 ntBASIC0.93□□□□□ -2.26
PTPN4P29074 SNORD79.1-201ENST00000516069 84 ntBASIC0.93□□□□□ -2.26
PTPN4P29074 RNU2-31P-201ENST00000516954 155 ntBASIC0.93□□□□□ -2.26
PTPN4P29074 MIR2681-201ENST00000581814 105 ntBASIC0.93□□□□□ -2.26
PTPN4P29074 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC0.93□□□□□ -2.26
PTPN4P29074 AC087685.1-201ENST00000587507 141 ntBASIC0.93□□□□□ -2.26
PTPN4P29074 AC044792.1-201ENST00000593294 196 ntBASIC0.93□□□□□ -2.26
PTPN4P29074 AC211469.2-201ENST00000605461 205 ntBASIC0.93□□□□□ -2.26
PTPN4P29074 MIR6857-201ENST00000613267 93 ntBASIC0.93□□□□□ -2.26
PTPN4P29074 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.93□□□□□ -2.26
PTPN4P29074 Y_RNA.64-201ENST00000362845 102 ntBASIC0.92□□□□□ -2.26
PTPN4P29074 Y_RNA.152-201ENST00000363578 100 ntBASIC0.92□□□□□ -2.26
PTPN4P29074 RNU6-899P-201ENST00000363947 107 ntBASIC0.92□□□□□ -2.26
PTPN4P29074 SNORD14E-201ENST00000364009 85 ntBASIC0.92□□□□□ -2.26
PTPN4P29074 Y_RNA.354-201ENST00000365448 111 ntBASIC0.92□□□□□ -2.26
PTPN4P29074 Y_RNA.363-201ENST00000365529 113 ntBASIC0.92□□□□□ -2.26
PTPN4P29074 MIR532-201ENST00000385025 91 ntBASIC0.92□□□□□ -2.26
PTPN4P29074 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.92□□□□□ -2.26
PTPN4P29074 MIR1278-201ENST00000408753 81 ntBASIC0.92□□□□□ -2.26
PTPN4P29074 RNU6-985P-201ENST00000410182 104 ntBASIC0.92□□□□□ -2.26
PTPN4P29074 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.92□□□□□ -2.26
PTPN4P29074 snoU13.25-201ENST00000458945 104 ntBASIC0.92□□□□□ -2.26
PTPN4P29074 Y_RNA.637-201ENST00000459424 114 ntBASIC0.92□□□□□ -2.26
PTPN4P29074 SNORA74.3-201ENST00000517108 154 ntBASIC0.92□□□□□ -2.26
PTPN4P29074 MIR3192-201ENST00000584920 77 ntBASIC0.92□□□□□ -2.26
PTPN4P29074 MIR6515-201ENST00000619843 57 ntBASIC0.92□□□□□ -2.26
PTPN4P29074 MIR373-201ENST00000362273 69 ntBASIC0.91□□□□□ -2.26
PTPN4P29074 Y_RNA.242-201ENST00000364473 110 ntBASIC0.91□□□□□ -2.26
PTPN4P29074 RNU6-326P-201ENST00000365480 107 ntBASIC0.91□□□□□ -2.26
PTPN4P29074 RNU6-639P-201ENST00000384074 107 ntBASIC0.91□□□□□ -2.26
PTPN4P29074 SNRPGP14-201ENST00000435400 219 ntBASIC0.91□□□□□ -2.26
PTPN4P29074 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC0.91□□□□□ -2.26
PTPN4P29074 AC245047.8-201ENST00000456455 284 ntBASIC0.91□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 181.1 ms