Protein–RNA interactions for Protein: P27694

RPA1, Replication protein A 70 kDa DNA-binding subunit, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1P27694 Y_RNA.456-201ENST00000384232 111 ntBASIC1.02□□□□□ -2.25
RPA1P27694 RNU6-472P-201ENST00000384299 107 ntBASIC1.02□□□□□ -2.25
RPA1P27694 RNU6-1160P-201ENST00000384546 104 ntBASIC1.02□□□□□ -2.25
RPA1P27694 SNORA40.15-201ENST00000516884 107 ntBASIC1.02□□□□□ -2.25
RPA1P27694 AC127455.1-201ENST00000565496 145 ntBASIC1.02□□□□□ -2.25
RPA1P27694 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.02□□□□□ -2.25
RPA1P27694 AC005357.1-201ENST00000588399 301 ntBASIC1.02□□□□□ -2.25
RPA1P27694 MIR6857-201ENST00000613267 93 ntBASIC1.02□□□□□ -2.25
RPA1P27694 Y_RNA.136-201ENST00000363444 102 ntBASIC1.01□□□□□ -2.25
RPA1P27694 RNU6-1209P-201ENST00000363655 107 ntBASIC1.01□□□□□ -2.25
RPA1P27694 RNU1-93P-201ENST00000364704 169 ntBASIC1.01□□□□□ -2.25
RPA1P27694 RNU6-290P-201ENST00000365212 101 ntBASIC1.01□□□□□ -2.25
RPA1P27694 Y_RNA.396-201ENST00000383949 103 ntBASIC1.01□□□□□ -2.25
RPA1P27694 SNORA72-201ENST00000384339 132 ntBASIC1.01□□□□□ -2.25
RPA1P27694 RNU6-738P-201ENST00000384531 106 ntBASIC1.01□□□□□ -2.25
RPA1P27694 MIR516B2-201ENST00000385190 85 ntBASIC1.01□□□□□ -2.25
RPA1P27694 RNU6-910P-201ENST00000390844 107 ntBASIC1.01□□□□□ -2.25
RPA1P27694 SNORD72-201ENST00000390994 80 ntBASIC1.01□□□□□ -2.25
RPA1P27694 RNU6-1203P-201ENST00000410703 110 ntBASIC1.01□□□□□ -2.25
RPA1P27694 AC091959.1-201ENST00000495857 238 ntBASIC1.01□□□□□ -2.25
RPA1P27694 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC1.01□□□□□ -2.25
RPA1P27694 RNU6-635P-201ENST00000516651 102 ntBASIC1.01□□□□□ -2.25
RPA1P27694 RNU6-113P-201ENST00000516653 101 ntBASIC1.01□□□□□ -2.25
RPA1P27694 Y_RNA.720-201ENST00000517166 92 ntBASIC1.01□□□□□ -2.25
RPA1P27694 AC136628.3-201ENST00000521868 290 ntBASIC1.01□□□□□ -2.25
RPA1P27694 DEFB108E-201ENST00000524692 240 ntBASIC1.01□□□□□ -2.25
RPA1P27694 MIR4643-201ENST00000577473 78 ntBASIC1.01□□□□□ -2.25
RPA1P27694 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.01□□□□□ -2.25
RPA1P27694 AC008737.2-201ENST00000599446 118 ntBASIC1.01□□□□□ -2.25
RPA1P27694 AC120024.3-201ENST00000603167 156 ntBASIC1.01□□□□□ -2.25
RPA1P27694 AC136443.5-201ENST00000603741 370 ntBASIC1.01□□□□□ -2.25
RPA1P27694 AL360085.1-201ENST00000604713 532 ntBASIC1.01□□□□□ -2.25
RPA1P27694 MIR548AY-201ENST00000617669 107 ntBASIC1.01□□□□□ -2.25
RPA1P27694 MIR373-201ENST00000362273 69 ntBASIC1□□□□□ -2.25
RPA1P27694 RNU4-90P-201ENST00000362773 141 ntBASIC1□□□□□ -2.25
RPA1P27694 Y_RNA.164-201ENST00000363709 102 ntBASIC1□□□□□ -2.25
RPA1P27694 Y_RNA.237-201ENST00000364439 102 ntBASIC1□□□□□ -2.25
RPA1P27694 AC117470.1-201ENST00000381974 330 ntBASIC1□□□□□ -2.25
RPA1P27694 MIR200A-201ENST00000384875 90 ntBASIC1□□□□□ -2.25
RPA1P27694 AL603910.2-201ENST00000407268 136 ntBASIC1□□□□□ -2.25
RPA1P27694 MIR1298-201ENST00000408783 112 ntBASIC1□□□□□ -2.25
RPA1P27694 SNORA36B-201ENST00000410438 131 ntBASIC1□□□□□ -2.25
RPA1P27694 POLR2J4-204ENST00000418424 324 ntBASIC1□□□□□ -2.25
RPA1P27694 RPL23AP54-201ENST00000495129 419 ntBASIC1□□□□□ -2.25
RPA1P27694 RNU6-1338P-201ENST00000516328 91 ntBASIC1□□□□□ -2.25
RPA1P27694 MIR3192-201ENST00000584920 77 ntBASIC1□□□□□ -2.25
RPA1P27694 MIR4762-201ENST00000585261 75 ntBASIC1□□□□□ -2.25
RPA1P27694 snoU18.1-201ENST00000629629 71 ntBASIC1□□□□□ -2.25
RPA1P27694 Y_RNA.203-201ENST00000364106 102 ntBASIC0.99□□□□□ -2.25
RPA1P27694 Y_RNA.217-201ENST00000364214 105 ntBASIC0.99□□□□□ -2.25
RPA1P27694 U8.5-201ENST00000364528 136 ntBASIC0.99□□□□□ -2.25
RPA1P27694 Y_RNA.276-201ENST00000364732 109 ntBASIC0.99□□□□□ -2.25
RPA1P27694 SNORD114-24-201ENST00000365029 72 ntBASIC0.99□□□□□ -2.25
RPA1P27694 SNORA80D-201ENST00000384488 135 ntBASIC0.99□□□□□ -2.25
RPA1P27694 RNU6ATAC3P-201ENST00000387974 126 ntBASIC0.99□□□□□ -2.25
RPA1P27694 AC063976.4-201ENST00000421971 163 ntBASIC0.99□□□□□ -2.25
RPA1P27694 AL731563.1-201ENST00000442202 214 ntBASIC0.99□□□□□ -2.25
RPA1P27694 Y_RNA.641-201ENST00000459414 105 ntBASIC0.99□□□□□ -2.25
RPA1P27694 AC048334.1-201ENST00000477975 159 ntBASIC0.99□□□□□ -2.25
RPA1P27694 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.99□□□□□ -2.25
RPA1P27694 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.99□□□□□ -2.25
RPA1P27694 SNORD79.1-201ENST00000516069 84 ntBASIC0.99□□□□□ -2.25
RPA1P27694 SNORD45.4-201ENST00000516629 73 ntBASIC0.99□□□□□ -2.25
RPA1P27694 AC090142.3-201ENST00000519012 385 ntBASIC0.99□□□□□ -2.25
RPA1P27694 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC0.99□□□□□ -2.25
RPA1P27694 MIR3973-201ENST00000579824 107 ntBASIC0.99□□□□□ -2.25
RPA1P27694 Y_RNA.812-201ENST00000610788 101 ntBASIC0.99□□□□□ -2.25
RPA1P27694 AL096861.1-201ENST00000610899 123 ntBASIC0.99□□□□□ -2.25
RPA1P27694 Y_RNA.784-201ENST00000613803 101 ntBASIC0.99□□□□□ -2.25
RPA1P27694 Y_RNA.787-201ENST00000616522 101 ntBASIC0.99□□□□□ -2.25
RPA1P27694 Y_RNA.780-201ENST00000617336 101 ntBASIC0.99□□□□□ -2.25
RPA1P27694 Y_RNA.801-201ENST00000619005 101 ntBASIC0.99□□□□□ -2.25
RPA1P27694 AL442644.1-201ENST00000454390 3105 ntBASIC0.99□□□□□ -2.25
RPA1P27694 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.98□□□□□ -2.25
RPA1P27694 RNU6-163P-201ENST00000384396 106 ntBASIC0.98□□□□□ -2.25
RPA1P27694 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.98□□□□□ -2.25
RPA1P27694 BTF3P11-201ENST00000426582 477 ntBASIC0.98□□□□□ -2.25
RPA1P27694 SNRPGP14-201ENST00000435400 219 ntBASIC0.98□□□□□ -2.25
RPA1P27694 SNORD11-201ENST00000459124 84 ntBASIC0.98□□□□□ -2.25
RPA1P27694 RNU2-31P-201ENST00000516954 155 ntBASIC0.98□□□□□ -2.25
RPA1P27694 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC0.98□□□□□ -2.25
RPA1P27694 FAM106DP-201ENST00000586416 501 ntBASIC0.98□□□□□ -2.25
RPA1P27694 RNU6-1272P-201ENST00000362776 107 ntBASIC0.97□□□□□ -2.25
RPA1P27694 RNU6-833P-201ENST00000363486 107 ntBASIC0.97□□□□□ -2.25
RPA1P27694 RNU1-36P-201ENST00000365130 165 ntBASIC0.97□□□□□ -2.25
RPA1P27694 RNU6-969P-201ENST00000383900 105 ntBASIC0.97□□□□□ -2.25
RPA1P27694 RNU6-710P-201ENST00000410424 105 ntBASIC0.97□□□□□ -2.25
RPA1P27694 MTND2P23-201ENST00000422990 651 ntBASIC0.97□□□□□ -2.25
RPA1P27694 AL358176.2-201ENST00000425769 204 ntBASIC0.97□□□□□ -2.25
RPA1P27694 AC245047.8-201ENST00000456455 284 ntBASIC0.97□□□□□ -2.25
RPA1P27694 MTND1P19-201ENST00000511780 315 ntBASIC0.97□□□□□ -2.25
RPA1P27694 RPL23AP91-201ENST00000569211 455 ntBASIC0.97□□□□□ -2.25
RPA1P27694 FAM71BP1-201ENST00000604431 523 ntBASIC0.97□□□□□ -2.25
RPA1P27694 MIR6504-201ENST00000613520 61 ntBASIC0.97□□□□□ -2.25
RPA1P27694 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.97□□□□□ -2.25
RPA1P27694 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.97□□□□□ -2.25
RPA1P27694 AC007742.2-201ENST00000618226 398 ntBASIC0.97□□□□□ -2.25
RPA1P27694 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC0.97□□□□□ -2.25
RPA1P27694 RNU6-740P-201ENST00000364734 105 ntBASIC0.96□□□□□ -2.26
RPA1P27694 RNU6-1187P-201ENST00000364771 110 ntBASIC0.96□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 109.3 ms