Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC1.06□□□□□ -2.24
GDF1P27539 RNU6-165P-201ENST00000517170 99 ntBASIC1.06□□□□□ -2.24
GDF1P27539 AC090821.2-201ENST00000523552 176 ntBASIC1.06□□□□□ -2.24
GDF1P27539 AL512310.8-201ENST00000550183 120 ntBASIC1.06□□□□□ -2.24
GDF1P27539 MIR3664-201ENST00000579074 99 ntBASIC1.06□□□□□ -2.24
GDF1P27539 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.06□□□□□ -2.24
GDF1P27539 AL442644.1-201ENST00000454390 3105 ntBASIC1.05□□□□□ -2.24
GDF1P27539 MIR335-201ENST00000362173 94 ntBASIC1.05□□□□□ -2.24
GDF1P27539 Y_RNA.176-201ENST00000363815 109 ntBASIC1.05□□□□□ -2.24
GDF1P27539 SNORA25.8-201ENST00000364831 128 ntBASIC1.05□□□□□ -2.24
GDF1P27539 RNU6-514P-201ENST00000384208 107 ntBASIC1.05□□□□□ -2.24
GDF1P27539 RNU6-163P-201ENST00000384396 106 ntBASIC1.05□□□□□ -2.24
GDF1P27539 MIR891A-201ENST00000401237 79 ntBASIC1.05□□□□□ -2.24
GDF1P27539 RNU6-651P-201ENST00000411040 105 ntBASIC1.05□□□□□ -2.24
GDF1P27539 MLLT10P1-201ENST00000418346 262 ntBASIC1.05□□□□□ -2.24
GDF1P27539 BTF3P11-201ENST00000426582 477 ntBASIC1.05□□□□□ -2.24
GDF1P27539 SNORD11-201ENST00000459124 84 ntBASIC1.05□□□□□ -2.24
GDF1P27539 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.05□□□□□ -2.24
GDF1P27539 MTCO2P24-201ENST00000515611 426 ntBASIC1.05□□□□□ -2.24
GDF1P27539 RNU6-1045P-201ENST00000516321 107 ntBASIC1.05□□□□□ -2.24
GDF1P27539 SNORD45.4-201ENST00000516629 73 ntBASIC1.05□□□□□ -2.24
GDF1P27539 RNU6-922P-201ENST00000516753 99 ntBASIC1.05□□□□□ -2.24
GDF1P27539 AC090049.2-201ENST00000550377 109 ntBASIC1.05□□□□□ -2.24
GDF1P27539 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC1.05□□□□□ -2.24
GDF1P27539 AC037487.3-201ENST00000606668 112 ntBASIC1.05□□□□□ -2.24
GDF1P27539 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.05□□□□□ -2.24
GDF1P27539 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.05□□□□□ -2.24
GDF1P27539 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
GDF1P27539 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.04□□□□□ -2.24
GDF1P27539 Y_RNA.117-201ENST00000363294 101 ntBASIC1.04□□□□□ -2.24
GDF1P27539 RNU6-740P-201ENST00000364734 105 ntBASIC1.04□□□□□ -2.24
GDF1P27539 SNORA25.9-201ENST00000365087 128 ntBASIC1.04□□□□□ -2.24
GDF1P27539 RNU6-1289P-201ENST00000384431 106 ntBASIC1.04□□□□□ -2.24
GDF1P27539 RNU6-1065P-201ENST00000384513 106 ntBASIC1.04□□□□□ -2.24
GDF1P27539 MIR618-201ENST00000385287 98 ntBASIC1.04□□□□□ -2.24
GDF1P27539 MIR1302-6-201ENST00000408466 90 ntBASIC1.04□□□□□ -2.24
GDF1P27539 MIR1298-201ENST00000408783 112 ntBASIC1.04□□□□□ -2.24
GDF1P27539 MTCYBP9-201ENST00000431021 303 ntBASIC1.04□□□□□ -2.24
GDF1P27539 COX6CP14-201ENST00000469580 174 ntBASIC1.04□□□□□ -2.24
GDF1P27539 AC087343.1-201ENST00000477341 475 ntBASIC1.04□□□□□ -2.24
GDF1P27539 CYP3A52P-201ENST00000563326 91 ntBASIC1.04□□□□□ -2.24
GDF1P27539 MIR5692C2-201ENST00000577959 77 ntBASIC1.04□□□□□ -2.24
GDF1P27539 MIR4295-201ENST00000585286 85 ntBASIC1.04□□□□□ -2.24
GDF1P27539 AL513534.2-201ENST00000603836 250 ntBASIC1.04□□□□□ -2.24
GDF1P27539 AL021707.8-201ENST00000609428 183 ntBASIC1.04□□□□□ -2.24
GDF1P27539 U2.14-201ENST00000615943 113 ntBASIC1.04□□□□□ -2.24
GDF1P27539 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.04□□□□□ -2.24
GDF1P27539 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC1.04□□□□□ -2.24
GDF1P27539 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC1.04□□□□□ -2.24
GDF1P27539 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
GDF1P27539 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.03□□□□□ -2.24
GDF1P27539 Y_RNA.149-201ENST00000363558 117 ntBASIC1.03□□□□□ -2.24
GDF1P27539 RNU6-1205P-201ENST00000363625 106 ntBASIC1.03□□□□□ -2.24
GDF1P27539 Y_RNA.226-201ENST00000364337 114 ntBASIC1.03□□□□□ -2.24
GDF1P27539 SNORA2.2-201ENST00000365473 135 ntBASIC1.03□□□□□ -2.24
GDF1P27539 RNU6-211P-201ENST00000384047 107 ntBASIC1.03□□□□□ -2.24
GDF1P27539 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.03□□□□□ -2.24
GDF1P27539 RNU6-131P-201ENST00000391144 107 ntBASIC1.03□□□□□ -2.24
GDF1P27539 RNU6-383P-201ENST00000410864 94 ntBASIC1.03□□□□□ -2.24
GDF1P27539 SNRPGP14-201ENST00000435400 219 ntBASIC1.03□□□□□ -2.24
GDF1P27539 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC1.03□□□□□ -2.24
GDF1P27539 SNORD2.1-201ENST00000458762 69 ntBASIC1.03□□□□□ -2.24
GDF1P27539 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.03□□□□□ -2.24
GDF1P27539 AC090142.3-201ENST00000519012 385 ntBASIC1.03□□□□□ -2.24
GDF1P27539 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC1.03□□□□□ -2.24
GDF1P27539 RPL23AP91-201ENST00000569211 455 ntBASIC1.03□□□□□ -2.24
GDF1P27539 AC008507.4-201ENST00000585464 127 ntBASIC1.03□□□□□ -2.24
GDF1P27539 AC012433.1-201ENST00000588916 398 ntBASIC1.03□□□□□ -2.24
GDF1P27539 Y_RNA.44-201ENST00000362676 108 ntBASIC1.02□□□□□ -2.25
GDF1P27539 snoU2-30.1-201ENST00000365012 70 ntBASIC1.02□□□□□ -2.25
GDF1P27539 Y_RNA.336-201ENST00000365307 109 ntBASIC1.02□□□□□ -2.25
GDF1P27539 RNU6-144P-201ENST00000383951 107 ntBASIC1.02□□□□□ -2.25
GDF1P27539 SNORD72-201ENST00000390994 80 ntBASIC1.02□□□□□ -2.25
GDF1P27539 AL603910.2-201ENST00000407268 136 ntBASIC1.02□□□□□ -2.25
GDF1P27539 AL118496.2-201ENST00000448300 230 ntBASIC1.02□□□□□ -2.25
GDF1P27539 RPL30P7-201ENST00000479312 323 ntBASIC1.02□□□□□ -2.25
GDF1P27539 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.02□□□□□ -2.25
GDF1P27539 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.02□□□□□ -2.25
GDF1P27539 Y_RNA.82-201ENST00000363000 102 ntBASIC1.01□□□□□ -2.25
GDF1P27539 Y_RNA.92-201ENST00000363043 102 ntBASIC1.01□□□□□ -2.25
GDF1P27539 RNU4-10P-201ENST00000364383 140 ntBASIC1.01□□□□□ -2.25
GDF1P27539 Y_RNA.235-201ENST00000364412 102 ntBASIC1.01□□□□□ -2.25
GDF1P27539 Y_RNA.306-201ENST00000365015 102 ntBASIC1.01□□□□□ -2.25
GDF1P27539 Y_RNA.312-201ENST00000365089 102 ntBASIC1.01□□□□□ -2.25
GDF1P27539 Y_RNA.322-201ENST00000365151 102 ntBASIC1.01□□□□□ -2.25
GDF1P27539 MIR516B2-201ENST00000385190 85 ntBASIC1.01□□□□□ -2.25
GDF1P27539 MIR1287-201ENST00000408492 90 ntBASIC1.01□□□□□ -2.25
GDF1P27539 SNORD127-201ENST00000458892 86 ntBASIC1.01□□□□□ -2.25
GDF1P27539 Y_RNA.650-201ENST00000459002 102 ntBASIC1.01□□□□□ -2.25
GDF1P27539 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC1.01□□□□□ -2.25
GDF1P27539 Y_RNA.668-201ENST00000516233 93 ntBASIC1.01□□□□□ -2.25
GDF1P27539 RNA5SP102-201ENST00000516865 106 ntBASIC1.01□□□□□ -2.25
GDF1P27539 Y_RNA.777-201ENST00000516982 102 ntBASIC1.01□□□□□ -2.25
GDF1P27539 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.01□□□□□ -2.25
GDF1P27539 MIR4643-201ENST00000577473 78 ntBASIC1.01□□□□□ -2.25
GDF1P27539 MIR2681-201ENST00000581814 105 ntBASIC1.01□□□□□ -2.25
GDF1P27539 FAM106DP-201ENST00000586416 501 ntBASIC1.01□□□□□ -2.25
GDF1P27539 Y_RNA.771-201ENST00000598668 102 ntBASIC1.01□□□□□ -2.25
GDF1P27539 JPX_2.1-201ENST00000614161 69 ntBASIC1.01□□□□□ -2.25
GDF1P27539 Y_RNA.789-201ENST00000622480 102 ntBASIC1.01□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 240.5 ms