Protein–RNA interactions for Protein: P19793

RXRA, Retinoic acid receptor RXR-alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRAP19793 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.7□□□□□ -2.14
RXRAP19793 Y_RNA.793-201ENST00000411222 111 ntBASIC1.7□□□□□ -2.14
RXRAP19793 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC1.7□□□□□ -2.14
RXRAP19793 AL138752.1-201ENST00000452964 351 ntBASIC1.7□□□□□ -2.14
RXRAP19793 Y_RNA.644-201ENST00000459006 113 ntBASIC1.7□□□□□ -2.14
RXRAP19793 RNU6-970P-201ENST00000516312 107 ntBASIC1.7□□□□□ -2.14
RXRAP19793 Y_RNA.674-201ENST00000516362 113 ntBASIC1.7□□□□□ -2.14
RXRAP19793 RNU6-182P-201ENST00000516970 105 ntBASIC1.7□□□□□ -2.14
RXRAP19793 AL591926.4-201ENST00000616895 298 ntBASIC1.7□□□□□ -2.14
RXRAP19793 SNORD3E-202ENST00000627253 216 ntBASIC1.7□□□□□ -2.14
RXRAP19793 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
RXRAP19793 Y_RNA.253-201ENST00000364562 112 ntBASIC1.69□□□□□ -2.14
RXRAP19793 RNU6-997P-201ENST00000384725 107 ntBASIC1.69□□□□□ -2.14
RXRAP19793 RN7SKP51-201ENST00000410781 304 ntBASIC1.69□□□□□ -2.14
RXRAP19793 Y_RNA.621-201ENST00000411065 96 ntBASIC1.69□□□□□ -2.14
RXRAP19793 PIGPP3-201ENST00000425307 415 ntBASIC1.69□□□□□ -2.14
RXRAP19793 AC027119.1-201ENST00000440877 241 ntBASIC1.69□□□□□ -2.14
RXRAP19793 RNU7-141P-201ENST00000459304 62 ntBASIC1.69□□□□□ -2.14
RXRAP19793 AC117454.1-201ENST00000491120 168 ntBASIC1.69□□□□□ -2.14
RXRAP19793 AC108729.3-201ENST00000513484 108 ntBASIC1.69□□□□□ -2.14
RXRAP19793 SNORA31.24-201ENST00000517232 57 ntBASIC1.69□□□□□ -2.14
RXRAP19793 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.69□□□□□ -2.14
RXRAP19793 MIR4285-201ENST00000581001 85 ntBASIC1.69□□□□□ -2.14
RXRAP19793 Z83818.1-201ENST00000603584 150 ntBASIC1.69□□□□□ -2.14
RXRAP19793 AC098479.1-201ENST00000609225 154 ntBASIC1.69□□□□□ -2.14
RXRAP19793 AL365265.1-201ENST00000621045 234 ntBASIC1.69□□□□□ -2.14
RXRAP19793 MIR8063-201ENST00000621930 81 ntBASIC1.69□□□□□ -2.14
RXRAP19793 AC027279.3-201ENST00000625055 122 ntBASIC1.69□□□□□ -2.14
RXRAP19793 AC134026.1-201ENST00000623249 2239 ntBASIC1.68□□□□□ -2.14
RXRAP19793 RNU6-1020P-201ENST00000363684 107 ntBASIC1.68□□□□□ -2.14
RXRAP19793 Y_RNA.262-201ENST00000364641 102 ntBASIC1.68□□□□□ -2.14
RXRAP19793 RNU6-923P-201ENST00000364753 107 ntBASIC1.68□□□□□ -2.14
RXRAP19793 MTCO2P33-201ENST00000402100 465 ntBASIC1.68□□□□□ -2.14
RXRAP19793 HMGN1P7-201ENST00000491722 313 ntBASIC1.68□□□□□ -2.14
RXRAP19793 AC079140.2-201ENST00000506193 142 ntBASIC1.68□□□□□ -2.14
RXRAP19793 RNA5SP445-201ENST00000515889 115 ntBASIC1.68□□□□□ -2.14
RXRAP19793 RNY3P16-201ENST00000516338 101 ntBASIC1.68□□□□□ -2.14
RXRAP19793 RNA5SP61-201ENST00000516453 100 ntBASIC1.68□□□□□ -2.14
RXRAP19793 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC1.68□□□□□ -2.14
RXRAP19793 AC004792.1-201ENST00000614523 137 ntBASIC1.68□□□□□ -2.14
RXRAP19793 AC013791.1-201ENST00000616619 62 ntBASIC1.68□□□□□ -2.14
RXRAP19793 RNU6-674P-201ENST00000363831 107 ntBASIC1.67□□□□□ -2.14
RXRAP19793 RNU6-899P-201ENST00000363947 107 ntBASIC1.67□□□□□ -2.14
RXRAP19793 Y_RNA.308-201ENST00000365043 101 ntBASIC1.67□□□□□ -2.14
RXRAP19793 RNU6-47P-201ENST00000383866 107 ntBASIC1.67□□□□□ -2.14
RXRAP19793 RNU6-969P-201ENST00000383900 105 ntBASIC1.67□□□□□ -2.14
RXRAP19793 RNU6-209P-201ENST00000384118 107 ntBASIC1.67□□□□□ -2.14
RXRAP19793 SNORA67.5-201ENST00000391036 107 ntBASIC1.67□□□□□ -2.14
RXRAP19793 RNU6-493P-201ENST00000391321 108 ntBASIC1.67□□□□□ -2.14
RXRAP19793 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.67□□□□□ -2.14
RXRAP19793 RPL23AP54-201ENST00000495129 419 ntBASIC1.67□□□□□ -2.14
RXRAP19793 CYCTP-201ENST00000504253 315 ntBASIC1.67□□□□□ -2.14
RXRAP19793 SUMO2P16-201ENST00000519475 264 ntBASIC1.67□□□□□ -2.14
RXRAP19793 AP002392.1-201ENST00000537692 208 ntBASIC1.67□□□□□ -2.14
RXRAP19793 MIR5692C2-201ENST00000577959 77 ntBASIC1.67□□□□□ -2.14
RXRAP19793 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.67□□□□□ -2.14
RXRAP19793 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
RXRAP19793 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.66□□□□□ -2.14
RXRAP19793 RNU6-653P-201ENST00000363074 106 ntBASIC1.66□□□□□ -2.14
RXRAP19793 RNU6-833P-201ENST00000363486 107 ntBASIC1.66□□□□□ -2.14
RXRAP19793 Y_RNA.203-201ENST00000364106 102 ntBASIC1.66□□□□□ -2.14
RXRAP19793 RNA5SP259-201ENST00000365541 109 ntBASIC1.66□□□□□ -2.14
RXRAP19793 MIR522-201ENST00000385071 87 ntBASIC1.66□□□□□ -2.14
RXRAP19793 MIR548I3-201ENST00000408378 149 ntBASIC1.66□□□□□ -2.14
RXRAP19793 MIR548I1-201ENST00000408810 149 ntBASIC1.66□□□□□ -2.14
RXRAP19793 SNORA36B-201ENST00000410438 131 ntBASIC1.66□□□□□ -2.14
RXRAP19793 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC1.66□□□□□ -2.14
RXRAP19793 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC1.66□□□□□ -2.14
RXRAP19793 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
RXRAP19793 FTX_2.1-201ENST00000618816 94 ntBASIC1.66□□□□□ -2.14
RXRAP19793 AC068700.1-201ENST00000565862 3754 ntBASIC1.65□□□□□ -2.14
RXRAP19793 MIR126-201ENST00000362291 85 ntBASIC1.65□□□□□ -2.15
RXRAP19793 SNORD68-201ENST00000363214 84 ntBASIC1.65□□□□□ -2.15
RXRAP19793 RNU6-1205P-201ENST00000363625 106 ntBASIC1.65□□□□□ -2.15
RXRAP19793 Y_RNA.293-201ENST00000364908 93 ntBASIC1.65□□□□□ -2.15
RXRAP19793 RNU6-144P-201ENST00000383951 107 ntBASIC1.65□□□□□ -2.15
RXRAP19793 RNU6-918P-201ENST00000391219 106 ntBASIC1.65□□□□□ -2.15
RXRAP19793 SNRPGP13-201ENST00000442212 177 ntBASIC1.65□□□□□ -2.15
RXRAP19793 RNU1-98P-201ENST00000458992 160 ntBASIC1.65□□□□□ -2.15
RXRAP19793 RNU7-120P-201ENST00000459334 63 ntBASIC1.65□□□□□ -2.15
RXRAP19793 RNU6-437P-201ENST00000459408 95 ntBASIC1.65□□□□□ -2.15
RXRAP19793 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC1.65□□□□□ -2.15
RXRAP19793 RNU7-12P-201ENST00000516030 62 ntBASIC1.65□□□□□ -2.15
RXRAP19793 RNU6-902P-201ENST00000517212 91 ntBASIC1.65□□□□□ -2.15
RXRAP19793 AC100767.1-201ENST00000528178 123 ntBASIC1.65□□□□□ -2.15
RXRAP19793 MIR4308-201ENST00000580634 81 ntBASIC1.65□□□□□ -2.15
RXRAP19793 AC120024.3-201ENST00000603167 156 ntBASIC1.65□□□□□ -2.15
RXRAP19793 RNU6-199P-201ENST00000362954 107 ntBASIC1.64□□□□□ -2.15
RXRAP19793 Y_RNA.150-201ENST00000363562 102 ntBASIC1.64□□□□□ -2.15
RXRAP19793 Y_RNA.270-201ENST00000364693 104 ntBASIC1.64□□□□□ -2.15
RXRAP19793 RNU4-17P-201ENST00000365598 141 ntBASIC1.64□□□□□ -2.15
RXRAP19793 Y_RNA.555-201ENST00000384673 110 ntBASIC1.64□□□□□ -2.15
RXRAP19793 MIR653-201ENST00000385279 96 ntBASIC1.64□□□□□ -2.15
RXRAP19793 AL603825.1-201ENST00000438481 80 ntBASIC1.64□□□□□ -2.15
RXRAP19793 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC1.64□□□□□ -2.15
RXRAP19793 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.64□□□□□ -2.15
RXRAP19793 AC022559.1-201ENST00000520905 205 ntBASIC1.64□□□□□ -2.15
RXRAP19793 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.64□□□□□ -2.15
RXRAP19793 AP000942.3-201ENST00000603702 160 ntBASIC1.64□□□□□ -2.15
RXRAP19793 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.64□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 172.3 ms