Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 AL391834.2-201ENST00000609982 546 ntBASIC-2.07□□□□□ -2.74
HMGA1P17096 SNORD56.2-201ENST00000363242 71 ntBASIC-2.08□□□□□ -2.74
HMGA1P17096 RNU6-324P-201ENST00000363957 106 ntBASIC-2.08□□□□□ -2.74
HMGA1P17096 Y_RNA.190-201ENST00000363964 101 ntBASIC-2.08□□□□□ -2.74
HMGA1P17096 RNU6-641P-201ENST00000384006 107 ntBASIC-2.08□□□□□ -2.74
HMGA1P17096 RNU6-576P-201ENST00000390854 102 ntBASIC-2.08□□□□□ -2.74
HMGA1P17096 MIR548K-201ENST00000408406 116 ntBASIC-2.08□□□□□ -2.74
HMGA1P17096 UQCRBP2-201ENST00000447827 297 ntBASIC-2.08□□□□□ -2.74
HMGA1P17096 SNORA25.16-201ENST00000516741 121 ntBASIC-2.08□□□□□ -2.74
HMGA1P17096 Y_RNA.714-201ENST00000517065 90 ntBASIC-2.08□□□□□ -2.74
HMGA1P17096 AC107934.1-201ENST00000522215 217 ntBASIC-2.08□□□□□ -2.74
HMGA1P17096 Y_RNA.247-201ENST00000364500 92 ntBASIC-2.09□□□□□ -2.74
HMGA1P17096 MIR124-2-201ENST00000385081 109 ntBASIC-2.09□□□□□ -2.74
HMGA1P17096 MIRLET7F2-201ENST00000385277 83 ntBASIC-2.09□□□□□ -2.74
HMGA1P17096 MTND3P9-201ENST00000429526 346 ntBASIC-2.09□□□□□ -2.74
HMGA1P17096 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC-2.09□□□□□ -2.74
HMGA1P17096 RNU7-67P-201ENST00000459003 62 ntBASIC-2.09□□□□□ -2.74
HMGA1P17096 RNU2-13P-201ENST00000515909 113 ntBASIC-2.09□□□□□ -2.74
HMGA1P17096 5S_rRNA.13-201ENST00000622298 123 ntBASIC-2.09□□□□□ -2.74
HMGA1P17096 RNU6-228P-201ENST00000362700 106 ntBASIC-2.1□□□□□ -2.75
HMGA1P17096 SNORA2.1-201ENST00000363089 137 ntBASIC-2.1□□□□□ -2.75
HMGA1P17096 SNORD74.6-201ENST00000364796 70 ntBASIC-2.1□□□□□ -2.75
HMGA1P17096 RNU6-61P-201ENST00000365528 109 ntBASIC-2.1□□□□□ -2.75
HMGA1P17096 RNU6-1286P-201ENST00000383871 107 ntBASIC-2.1□□□□□ -2.75
HMGA1P17096 Y_RNA.577-201ENST00000384794 101 ntBASIC-2.1□□□□□ -2.75
HMGA1P17096 SNORD41.1-201ENST00000391000 69 ntBASIC-2.1□□□□□ -2.75
HMGA1P17096 RNU6ATAC42P-201ENST00000408637 95 ntBASIC-2.1□□□□□ -2.75
HMGA1P17096 RNU6-602P-201ENST00000411155 105 ntBASIC-2.1□□□□□ -2.75
HMGA1P17096 MTND3P8-201ENST00000412909 339 ntBASIC-2.1□□□□□ -2.75
HMGA1P17096 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC-2.1□□□□□ -2.75
HMGA1P17096 RNA5SP54-201ENST00000516951 92 ntBASIC-2.1□□□□□ -2.75
HMGA1P17096 MIR3912-201ENST00000577566 105 ntBASIC-2.1□□□□□ -2.75
HMGA1P17096 AL353803.5-201ENST00000599815 141 ntBASIC-2.1□□□□□ -2.75
HMGA1P17096 uc_338.10-201ENST00000621872 182 ntBASIC-2.1□□□□□ -2.75
HMGA1P17096 RNU6-354P-201ENST00000383862 107 ntBASIC-2.11□□□□□ -2.75
HMGA1P17096 Y_RNA.450-201ENST00000384198 113 ntBASIC-2.11□□□□□ -2.75
HMGA1P17096 RNU6-610P-201ENST00000384264 107 ntBASIC-2.11□□□□□ -2.75
HMGA1P17096 RNU6-769P-201ENST00000384407 104 ntBASIC-2.11□□□□□ -2.75
HMGA1P17096 Y_RNA.494-201ENST00000384432 111 ntBASIC-2.11□□□□□ -2.75
HMGA1P17096 MIR29B1-201ENST00000385015 81 ntBASIC-2.11□□□□□ -2.75
HMGA1P17096 RNU7-55P-201ENST00000459426 62 ntBASIC-2.11□□□□□ -2.75
HMGA1P17096 RNU6-287P-201ENST00000516230 98 ntBASIC-2.11□□□□□ -2.75
HMGA1P17096 AC090616.2-202ENST00000584248 222 ntBASIC-2.11□□□□□ -2.75
HMGA1P17096 AC027449.1-201ENST00000608890 407 ntBASIC-2.11□□□□□ -2.75
HMGA1P17096 Y_RNA.46-201ENST00000362695 102 ntBASIC-2.12□□□□□ -2.75
HMGA1P17096 RNU6-704P-201ENST00000364162 103 ntBASIC-2.12□□□□□ -2.75
HMGA1P17096 RNU6-715P-201ENST00000365204 103 ntBASIC-2.12□□□□□ -2.75
HMGA1P17096 RNU6-913P-201ENST00000390913 95 ntBASIC-2.12□□□□□ -2.75
HMGA1P17096 AL590623.1-201ENST00000427864 105 ntBASIC-2.12□□□□□ -2.75
HMGA1P17096 USP9YP30-201ENST00000430729 455 ntBASIC-2.12□□□□□ -2.75
HMGA1P17096 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC-2.12□□□□□ -2.75
HMGA1P17096 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC-2.12□□□□□ -2.75
HMGA1P17096 AC091179.3-201ENST00000474761 144 ntBASIC-2.12□□□□□ -2.75
HMGA1P17096 RNU6-958P-201ENST00000516995 106 ntBASIC-2.12□□□□□ -2.75
HMGA1P17096 MTND2P32-201ENST00000521584 1038 ntBASIC-2.12□□□□□ -2.75
HMGA1P17096 AL445984.1-201ENST00000637834 659 ntBASIC-2.12□□□□□ -2.75
HMGA1P17096 Y_RNA.123-201ENST00000363338 102 ntBASIC-2.13□□□□□ -2.75
HMGA1P17096 Y_RNA.214-201ENST00000364201 112 ntBASIC-2.13□□□□□ -2.75
HMGA1P17096 SNORA24-201ENST00000384096 131 ntBASIC-2.13□□□□□ -2.75
HMGA1P17096 MTCYBP4-201ENST00000401524 249 ntBASIC-2.13□□□□□ -2.75
HMGA1P17096 RNU6-387P-201ENST00000411331 105 ntBASIC-2.13□□□□□ -2.75
HMGA1P17096 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC-2.13□□□□□ -2.75
HMGA1P17096 RNU6-612P-201ENST00000516909 102 ntBASIC-2.13□□□□□ -2.75
HMGA1P17096 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC-2.13□□□□□ -2.75
HMGA1P17096 AC002044.1-201ENST00000606707 158 ntBASIC-2.13□□□□□ -2.75
HMGA1P17096 RNY1P11-201ENST00000363759 113 ntBASIC-2.14□□□□□ -2.75
HMGA1P17096 SNORD115-35-201ENST00000365122 82 ntBASIC-2.14□□□□□ -2.75
HMGA1P17096 SNORD24-201ENST00000383884 75 ntBASIC-2.14□□□□□ -2.75
HMGA1P17096 RNU6-1029P-201ENST00000384109 107 ntBASIC-2.14□□□□□ -2.75
HMGA1P17096 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC-2.14□□□□□ -2.75
HMGA1P17096 AC079140.5-201ENST00000507882 310 ntBASIC-2.14□□□□□ -2.75
HMGA1P17096 SNORA25.10-201ENST00000515926 124 ntBASIC-2.14□□□□□ -2.75
HMGA1P17096 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-2.14□□□□□ -2.75
HMGA1P17096 MTND1P24-201ENST00000552175 861 ntBASIC-2.14□□□□□ -2.75
HMGA1P17096 AC103705.1-201ENST00000619013 241 ntBASIC-2.14□□□□□ -2.75
HMGA1P17096 MIR6818-201ENST00000621576 65 ntBASIC-2.14□□□□□ -2.75
HMGA1P17096 AC022418.1-201ENST00000624118 445 ntBASIC-2.14□□□□□ -2.75
HMGA1P17096 Y_RNA.10-201ENST00000362371 110 ntBASIC-2.15□□□□□ -2.75
HMGA1P17096 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC-2.15□□□□□ -2.75
HMGA1P17096 RNU6-437P-201ENST00000459408 95 ntBASIC-2.15□□□□□ -2.75
HMGA1P17096 RNU6-685P-201ENST00000517088 95 ntBASIC-2.15□□□□□ -2.75
HMGA1P17096 AC072046.2-201ENST00000618366 268 ntBASIC-2.15□□□□□ -2.75
HMGA1P17096 AC091931.1-201ENST00000623488 728 ntBASIC-2.15□□□□□ -2.75
HMGA1P17096 AC091912.2-201ENST00000624798 167 ntBASIC-2.15□□□□□ -2.75
HMGA1P17096 RNU6-227P-201ENST00000362865 103 ntBASIC-2.16□□□□□ -2.76
HMGA1P17096 RNU6-905P-201ENST00000384434 107 ntBASIC-2.16□□□□□ -2.76
HMGA1P17096 Y_RNA.576-201ENST00000384781 102 ntBASIC-2.16□□□□□ -2.76
HMGA1P17096 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC-2.16□□□□□ -2.76
HMGA1P17096 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC-2.16□□□□□ -2.76
HMGA1P17096 MTND1P35-201ENST00000526739 508 ntBASIC-2.16□□□□□ -2.76
HMGA1P17096 MIR548AE1-201ENST00000583292 70 ntBASIC-2.16□□□□□ -2.76
HMGA1P17096 AC245014.2-201ENST00000603689 287 ntBASIC-2.16□□□□□ -2.76
HMGA1P17096 AL136370.1-201ENST00000608166 691 ntBASIC-2.16□□□□□ -2.76
HMGA1P17096 MIR8068-201ENST00000618032 68 ntBASIC-2.16□□□□□ -2.76
HMGA1P17096 RNU6-1062P-201ENST00000383908 107 ntBASIC-2.17□□□□□ -2.76
HMGA1P17096 RNU6-224P-201ENST00000384055 107 ntBASIC-2.17□□□□□ -2.76
HMGA1P17096 RNU6-154P-201ENST00000384306 106 ntBASIC-2.17□□□□□ -2.76
HMGA1P17096 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC-2.17□□□□□ -2.76
HMGA1P17096 AC074085.1-201ENST00000413598 418 ntBASIC-2.17□□□□□ -2.76
HMGA1P17096 MTATP6P20-201ENST00000414147 562 ntBASIC-2.17□□□□□ -2.76
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms