Protein–RNA interactions for Protein: P17035

ZNF28, Zinc finger protein 28, humanhuman

Predictions only

Length 718 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF28P17035 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.38□□□□□ -2.03
ZNF28P17035 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.38□□□□□ -2.03
ZNF28P17035 SNORD115-3-201ENST00000363100 82 ntBASIC2.38□□□□□ -2.03
ZNF28P17035 Y_RNA.116-201ENST00000363292 103 ntBASIC2.38□□□□□ -2.03
ZNF28P17035 Y_RNA.265-201ENST00000364677 108 ntBASIC2.38□□□□□ -2.03
ZNF28P17035 Y_RNA.309-201ENST00000365046 111 ntBASIC2.38□□□□□ -2.03
ZNF28P17035 RNU6-1189P-201ENST00000383958 107 ntBASIC2.38□□□□□ -2.03
ZNF28P17035 MIR570-201ENST00000384917 97 ntBASIC2.38□□□□□ -2.03
ZNF28P17035 RNA5SP210-201ENST00000391034 120 ntBASIC2.38□□□□□ -2.03
ZNF28P17035 SNORA11.4-201ENST00000408823 129 ntBASIC2.38□□□□□ -2.03
ZNF28P17035 AL031737.1-201ENST00000450125 223 ntBASIC2.38□□□□□ -2.03
ZNF28P17035 ICE2P2-201ENST00000483823 2787 ntBASIC2.38□□□□□ -2.03
ZNF28P17035 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC2.38□□□□□ -2.03
ZNF28P17035 RNU6-412P-201ENST00000516434 106 ntBASIC2.38□□□□□ -2.03
ZNF28P17035 SNORD45.4-201ENST00000516629 73 ntBASIC2.38□□□□□ -2.03
ZNF28P17035 RNU6-826P-201ENST00000516827 104 ntBASIC2.38□□□□□ -2.03
ZNF28P17035 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.38□□□□□ -2.03
ZNF28P17035 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
ZNF28P17035 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.38□□□□□ -2.03
ZNF28P17035 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.38□□□□□ -2.03
ZNF28P17035 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
ZNF28P17035 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.37□□□□□ -2.03
ZNF28P17035 MIR450A1-201ENST00000362262 91 ntBASIC2.37□□□□□ -2.03
ZNF28P17035 SNORD115-28-201ENST00000363931 81 ntBASIC2.37□□□□□ -2.03
ZNF28P17035 RNU6-268P-201ENST00000364174 107 ntBASIC2.37□□□□□ -2.03
ZNF28P17035 SNORA2.2-201ENST00000365473 135 ntBASIC2.37□□□□□ -2.03
ZNF28P17035 RNA5SP482-201ENST00000391269 118 ntBASIC2.37□□□□□ -2.03
ZNF28P17035 AL606517.2-201ENST00000442855 241 ntBASIC2.37□□□□□ -2.03
ZNF28P17035 COX6CP6-201ENST00000490840 228 ntBASIC2.37□□□□□ -2.03
ZNF28P17035 RNU6-240P-201ENST00000516098 97 ntBASIC2.37□□□□□ -2.03
ZNF28P17035 AC026271.5-201ENST00000577873 130 ntBASIC2.37□□□□□ -2.03
ZNF28P17035 AC104984.5-201ENST00000586878 94 ntBASIC2.37□□□□□ -2.03
ZNF28P17035 ZNF658B-202ENST00000615961 3375 ntBASIC2.36□□□□□ -2.03
ZNF28P17035 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.36□□□□□ -2.03
ZNF28P17035 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.36□□□□□ -2.03
ZNF28P17035 RNA5SP393-201ENST00000363423 117 ntBASIC2.36□□□□□ -2.03
ZNF28P17035 RNU6-1255P-201ENST00000363434 112 ntBASIC2.36□□□□□ -2.03
ZNF28P17035 Y_RNA.281-201ENST00000364774 94 ntBASIC2.36□□□□□ -2.03
ZNF28P17035 RNU6-32P-201ENST00000383948 107 ntBASIC2.36□□□□□ -2.03
ZNF28P17035 RNU6-13P-201ENST00000384248 107 ntBASIC2.36□□□□□ -2.03
ZNF28P17035 RNU6-12P-201ENST00000384604 107 ntBASIC2.36□□□□□ -2.03
ZNF28P17035 RNU6-41P-201ENST00000384741 107 ntBASIC2.36□□□□□ -2.03
ZNF28P17035 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
ZNF28P17035 RNU4-53P-201ENST00000410828 140 ntBASIC2.36□□□□□ -2.03
ZNF28P17035 Z98742.3-201ENST00000418637 326 ntBASIC2.36□□□□□ -2.03
ZNF28P17035 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC2.36□□□□□ -2.03
ZNF28P17035 SNRPGP14-201ENST00000435400 219 ntBASIC2.36□□□□□ -2.03
ZNF28P17035 RNU7-26P-201ENST00000458980 63 ntBASIC2.36□□□□□ -2.03
ZNF28P17035 AC004486.1-201ENST00000546846 233 ntBASIC2.36□□□□□ -2.03
ZNF28P17035 AC007012.1-201ENST00000567192 175 ntBASIC2.36□□□□□ -2.03
ZNF28P17035 MIR4658-201ENST00000584344 65 ntBASIC2.36□□□□□ -2.03
ZNF28P17035 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.36□□□□□ -2.03
ZNF28P17035 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
ZNF28P17035 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
ZNF28P17035 Y_RNA.37-201ENST00000362606 108 ntBASIC2.35□□□□□ -2.03
ZNF28P17035 U8.2-201ENST00000363156 134 ntBASIC2.35□□□□□ -2.03
ZNF28P17035 Y_RNA.336-201ENST00000365307 109 ntBASIC2.35□□□□□ -2.03
ZNF28P17035 Y_RNA.495-201ENST00000384435 112 ntBASIC2.35□□□□□ -2.03
ZNF28P17035 Y_RNA.547-201ENST00000384654 119 ntBASIC2.35□□□□□ -2.03
ZNF28P17035 SNORA80E-201ENST00000384744 137 ntBASIC2.35□□□□□ -2.03
ZNF28P17035 RNA5SP109-201ENST00000391010 116 ntBASIC2.35□□□□□ -2.03
ZNF28P17035 SUMO1P4-201ENST00000429430 302 ntBASIC2.35□□□□□ -2.03
ZNF28P17035 AL445646.1-201ENST00000431784 216 ntBASIC2.35□□□□□ -2.03
ZNF28P17035 RPS26P48-201ENST00000491713 339 ntBASIC2.35□□□□□ -2.03
ZNF28P17035 RNU7-28P-201ENST00000516759 62 ntBASIC2.35□□□□□ -2.03
ZNF28P17035 RNU7-70P-201ENST00000516941 66 ntBASIC2.35□□□□□ -2.03
ZNF28P17035 MIR5194-201ENST00000582634 120 ntBASIC2.35□□□□□ -2.03
ZNF28P17035 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.35□□□□□ -2.03
ZNF28P17035 AC015726.2-201ENST00000620112 122 ntBASIC2.35□□□□□ -2.03
ZNF28P17035 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.34□□□□□ -2.03
ZNF28P17035 RNU6-1107P-201ENST00000364817 104 ntBASIC2.34□□□□□ -2.03
ZNF28P17035 RNU6-690P-201ENST00000365242 106 ntBASIC2.34□□□□□ -2.03
ZNF28P17035 SNORD12C-201ENST00000386307 89 ntBASIC2.34□□□□□ -2.03
ZNF28P17035 AL359511.1-201ENST00000402970 211 ntBASIC2.34□□□□□ -2.03
ZNF28P17035 HMGN2P32-201ENST00000444648 269 ntBASIC2.34□□□□□ -2.03
ZNF28P17035 SNORD36C-201ENST00000516733 66 ntBASIC2.34□□□□□ -2.03
ZNF28P17035 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.34□□□□□ -2.03
ZNF28P17035 MIR3670-2-201ENST00000582974 65 ntBASIC2.34□□□□□ -2.03
ZNF28P17035 MIR3670-1-201ENST00000584160 65 ntBASIC2.34□□□□□ -2.03
ZNF28P17035 MIR3670-3-201ENST00000584855 65 ntBASIC2.34□□□□□ -2.03
ZNF28P17035 MIR3670-4-201ENST00000612260 65 ntBASIC2.34□□□□□ -2.03
ZNF28P17035 AC022513.1-201ENST00000624512 117 ntBASIC2.34□□□□□ -2.03
ZNF28P17035 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
ZNF28P17035 ZNF720P1-201ENST00000562403 1939 ntBASIC2.33□□□□□ -2.04
ZNF28P17035 RNU6-106P-201ENST00000384405 107 ntBASIC2.33□□□□□ -2.04
ZNF28P17035 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
ZNF28P17035 STAG3L5P-204ENST00000443759 179 ntBASIC2.33□□□□□ -2.04
ZNF28P17035 AC234781.5-201ENST00000508429 271 ntBASIC2.33□□□□□ -2.04
ZNF28P17035 AC005786.1-201ENST00000588553 154 ntBASIC2.33□□□□□ -2.04
ZNF28P17035 AC022202.1-201ENST00000613515 211 ntBASIC2.33□□□□□ -2.04
ZNF28P17035 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.33□□□□□ -2.04
ZNF28P17035 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.33□□□□□ -2.04
ZNF28P17035 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
ZNF28P17035 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
ZNF28P17035 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
ZNF28P17035 Y_RNA.85-201ENST00000363014 111 ntBASIC2.32□□□□□ -2.04
ZNF28P17035 RNU1-91P-201ENST00000364746 163 ntBASIC2.32□□□□□ -2.04
ZNF28P17035 MIR29C-201ENST00000385231 88 ntBASIC2.32□□□□□ -2.04
ZNF28P17035 RNU6-554P-201ENST00000410466 106 ntBASIC2.32□□□□□ -2.04
ZNF28P17035 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.32□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 112.5 ms