Protein–RNA interactions for Protein: P16402

HIST1H1D, Histone H1.3, humanhuman

Known RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1DP16402 AC244505.6-201ENST00000452829 130 ntBASIC-1.47□□□□□ -2.64
HIST1H1DP16402 RNU6-1114P-201ENST00000516022 107 ntBASIC-1.47□□□□□ -2.64
HIST1H1DP16402 MRPS18CP4-201ENST00000535821 231 ntBASIC-1.47□□□□□ -2.64
HIST1H1DP16402 OSBPL9P5-201ENST00000542581 171 ntBASIC-1.47□□□□□ -2.64
HIST1H1DP16402 TUSC7.1-201ENST00000610969 165 ntBASIC-1.47□□□□□ -2.64
HIST1H1DP16402 AC007671.2-201ENST00000637344 619 ntBASIC-1.47□□□□□ -2.64
HIST1H1DP16402 MTND5P18-201ENST00000445624 1801 ntBASIC-1.47□□□□□ -2.65
HIST1H1DP16402 SNORD115-34-201ENST00000362441 82 ntBASIC-1.48□□□□□ -2.65
HIST1H1DP16402 SNORD115-12-201ENST00000362583 82 ntBASIC-1.48□□□□□ -2.65
HIST1H1DP16402 SNORD115-29-201ENST00000362834 82 ntBASIC-1.48□□□□□ -2.65
HIST1H1DP16402 SNORD115-9-201ENST00000362912 82 ntBASIC-1.48□□□□□ -2.65
HIST1H1DP16402 SNORD115-21-201ENST00000362963 81 ntBASIC-1.48□□□□□ -2.65
HIST1H1DP16402 SNORD115-14-201ENST00000363090 81 ntBASIC-1.48□□□□□ -2.65
HIST1H1DP16402 SNORD115-13-201ENST00000363358 82 ntBASIC-1.48□□□□□ -2.65
HIST1H1DP16402 SNORD115-41-201ENST00000363608 82 ntBASIC-1.48□□□□□ -2.65
HIST1H1DP16402 SNORD115-11-201ENST00000363616 82 ntBASIC-1.48□□□□□ -2.65
HIST1H1DP16402 SNORD115-5-201ENST00000363633 82 ntBASIC-1.48□□□□□ -2.65
HIST1H1DP16402 SNORD115-39-201ENST00000363694 82 ntBASIC-1.48□□□□□ -2.65
HIST1H1DP16402 Y_RNA.172-201ENST00000363765 102 ntBASIC-1.48□□□□□ -2.65
HIST1H1DP16402 SNORD115-4-201ENST00000363810 82 ntBASIC-1.48□□□□□ -2.65
HIST1H1DP16402 SNORD115-16-201ENST00000363887 82 ntBASIC-1.48□□□□□ -2.65
HIST1H1DP16402 SNORD115-6-201ENST00000363942 82 ntBASIC-1.48□□□□□ -2.65
HIST1H1DP16402 SNORD115-42-201ENST00000364273 82 ntBASIC-1.48□□□□□ -2.65
HIST1H1DP16402 RNU4-75P-201ENST00000364621 146 ntBASIC-1.48□□□□□ -2.65
HIST1H1DP16402 SNORD115-15-201ENST00000364809 81 ntBASIC-1.48□□□□□ -2.65
HIST1H1DP16402 SNORD115-1-201ENST00000364961 82 ntBASIC-1.48□□□□□ -2.65
HIST1H1DP16402 SNORD115-26-201ENST00000365067 82 ntBASIC-1.48□□□□□ -2.65
HIST1H1DP16402 SNORD115-10-201ENST00000365073 81 ntBASIC-1.48□□□□□ -2.65
HIST1H1DP16402 SNORD115-43-201ENST00000365503 82 ntBASIC-1.48□□□□□ -2.65
HIST1H1DP16402 SNORD115-36-201ENST00000365629 82 ntBASIC-1.48□□□□□ -2.65
HIST1H1DP16402 RNU6-1190P-201ENST00000410811 104 ntBASIC-1.48□□□□□ -2.65
HIST1H1DP16402 USP9YP30-201ENST00000430729 455 ntBASIC-1.48□□□□□ -2.65
HIST1H1DP16402 RNU7-180P-201ENST00000459240 63 ntBASIC-1.48□□□□□ -2.65
HIST1H1DP16402 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC-1.48□□□□□ -2.65
HIST1H1DP16402 RNA5SP470-201ENST00000516463 106 ntBASIC-1.48□□□□□ -2.65
HIST1H1DP16402 MIR378F-201ENST00000578143 78 ntBASIC-1.48□□□□□ -2.65
HIST1H1DP16402 MIR3682-201ENST00000581338 84 ntBASIC-1.48□□□□□ -2.65
HIST1H1DP16402 AL356055.1-201ENST00000602528 446 ntBASIC-1.48□□□□□ -2.65
HIST1H1DP16402 SNORD115-40-201ENST00000606510 82 ntBASIC-1.48□□□□□ -2.65
HIST1H1DP16402 HULC.1-201ENST00000612720 240 ntBASIC-1.48□□□□□ -2.65
HIST1H1DP16402 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC-1.49□□□□□ -2.65
HIST1H1DP16402 RNU6-517P-201ENST00000384362 110 ntBASIC-1.49□□□□□ -2.65
HIST1H1DP16402 RNU6-901P-201ENST00000384593 106 ntBASIC-1.49□□□□□ -2.65
HIST1H1DP16402 MIRLET7F2-201ENST00000385277 83 ntBASIC-1.49□□□□□ -2.65
HIST1H1DP16402 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC-1.49□□□□□ -2.65
HIST1H1DP16402 MTCO2P16-201ENST00000436962 677 ntBASIC-1.49□□□□□ -2.65
HIST1H1DP16402 SNORA13-201ENST00000458790 133 ntBASIC-1.49□□□□□ -2.65
HIST1H1DP16402 RNU6-1194P-201ENST00000516208 104 ntBASIC-1.49□□□□□ -2.65
HIST1H1DP16402 RNU6-966P-201ENST00000516479 104 ntBASIC-1.49□□□□□ -2.65
HIST1H1DP16402 AC093023.1-201ENST00000547375 507 ntBASIC-1.49□□□□□ -2.65
HIST1H1DP16402 MIR3179-1-201ENST00000578940 84 ntBASIC-1.49□□□□□ -2.65
HIST1H1DP16402 MIR3179-2-201ENST00000579107 84 ntBASIC-1.49□□□□□ -2.65
HIST1H1DP16402 MIR3179-3-201ENST00000579566 84 ntBASIC-1.49□□□□□ -2.65
HIST1H1DP16402 AC073648.5-201ENST00000603502 305 ntBASIC-1.49□□□□□ -2.65
HIST1H1DP16402 Z84480.1-201ENST00000605131 311 ntBASIC-1.49□□□□□ -2.65
HIST1H1DP16402 MIR3179-4-201ENST00000617599 84 ntBASIC-1.49□□□□□ -2.65
HIST1H1DP16402 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC-1.49□□□□□ -2.65
HIST1H1DP16402 Y_RNA.110-201ENST00000363220 99 ntBASIC-1.5□□□□□ -2.65
HIST1H1DP16402 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC-1.5□□□□□ -2.65
HIST1H1DP16402 CCDC34P1-201ENST00000507441 517 ntBASIC-1.5□□□□□ -2.65
HIST1H1DP16402 RNU6-189P-201ENST00000516120 101 ntBASIC-1.5□□□□□ -2.65
HIST1H1DP16402 AC008507.4-201ENST00000585464 127 ntBASIC-1.5□□□□□ -2.65
HIST1H1DP16402 AC011373.1-201ENST00000607270 237 ntBASIC-1.5□□□□□ -2.65
HIST1H1DP16402 AC087683.2-201ENST00000611384 326 ntBASIC-1.5□□□□□ -2.65
HIST1H1DP16402 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC-1.5□□□□□ -2.65
HIST1H1DP16402 AL662814.1-201ENST00000617364 121 ntBASIC-1.5□□□□□ -2.65
HIST1H1DP16402 AC103705.1-201ENST00000619013 241 ntBASIC-1.5□□□□□ -2.65
HIST1H1DP16402 MIR3674-201ENST00000636576 68 ntBASIC-1.5□□□□□ -2.65
HIST1H1DP16402 RNA5SP403-201ENST00000363598 108 ntBASIC-1.51□□□□□ -2.65
HIST1H1DP16402 RNU6-1200P-201ENST00000384162 107 ntBASIC-1.51□□□□□ -2.65
HIST1H1DP16402 Y_RNA.598-201ENST00000410480 95 ntBASIC-1.51□□□□□ -2.65
HIST1H1DP16402 RNU6-1332P-201ENST00000516666 104 ntBASIC-1.51□□□□□ -2.65
HIST1H1DP16402 AC140658.3-201ENST00000567603 271 ntBASIC-1.51□□□□□ -2.65
HIST1H1DP16402 MIR4473-201ENST00000583731 91 ntBASIC-1.51□□□□□ -2.65
HIST1H1DP16402 RNU6-502P-201ENST00000362419 108 ntBASIC-1.52□□□□□ -2.65
HIST1H1DP16402 SNORD115-30-201ENST00000364117 82 ntBASIC-1.52□□□□□ -2.65
HIST1H1DP16402 Y_RNA.242-201ENST00000364473 110 ntBASIC-1.52□□□□□ -2.65
HIST1H1DP16402 RNU6-702P-201ENST00000364982 107 ntBASIC-1.52□□□□□ -2.65
HIST1H1DP16402 RNU6-900P-201ENST00000384498 102 ntBASIC-1.52□□□□□ -2.65
HIST1H1DP16402 MIR181B2-201ENST00000385004 89 ntBASIC-1.52□□□□□ -2.65
HIST1H1DP16402 MIR517B-201ENST00000385102 67 ntBASIC-1.52□□□□□ -2.65
HIST1H1DP16402 MTND2P9-201ENST00000422293 931 ntBASIC-1.52□□□□□ -2.65
HIST1H1DP16402 AL356010.1-201ENST00000456364 102 ntBASIC-1.52□□□□□ -2.65
HIST1H1DP16402 MTCO2P30-201ENST00000503662 364 ntBASIC-1.52□□□□□ -2.65
HIST1H1DP16402 RNU4ATAC8P-201ENST00000516196 109 ntBASIC-1.52□□□□□ -2.65
HIST1H1DP16402 RNU7-53P-201ENST00000516705 60 ntBASIC-1.52□□□□□ -2.65
HIST1H1DP16402 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC-1.52□□□□□ -2.65
HIST1H1DP16402 AP000942.4-201ENST00000604811 241 ntBASIC-1.52□□□□□ -2.65
HIST1H1DP16402 MIR539-201ENST00000365690 78 ntBASIC-1.53□□□□□ -2.65
HIST1H1DP16402 RNU6-214P-201ENST00000384130 107 ntBASIC-1.53□□□□□ -2.65
HIST1H1DP16402 RNU6-767P-201ENST00000384132 107 ntBASIC-1.53□□□□□ -2.65
HIST1H1DP16402 RNY3P9-201ENST00000384727 106 ntBASIC-1.53□□□□□ -2.65
HIST1H1DP16402 RNA5SP475-201ENST00000410568 110 ntBASIC-1.53□□□□□ -2.65
HIST1H1DP16402 RNU6-1001P-201ENST00000411265 100 ntBASIC-1.53□□□□□ -2.65
HIST1H1DP16402 MTND4P7-201ENST00000523876 130 ntBASIC-1.53□□□□□ -2.65
HIST1H1DP16402 MIR4324-201ENST00000584846 72 ntBASIC-1.53□□□□□ -2.65
HIST1H1DP16402 MIR6738-201ENST00000619620 64 ntBASIC-1.53□□□□□ -2.65
HIST1H1DP16402 Y_RNA.133-201ENST00000363428 110 ntBASIC-1.54□□□□□ -2.66
HIST1H1DP16402 Y_RNA.189-201ENST00000363959 112 ntBASIC-1.54□□□□□ -2.66
HIST1H1DP16402 Y_RNA.241-201ENST00000364470 117 ntBASIC-1.54□□□□□ -2.66
Retrieved 100 of 98,524 protein–RNA pairs in 109.7 ms