Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 MIR4661-201ENST00000582720 75 ntBASIC1.02□□□□□ -2.25
PDGFRAP16234 AL355297.3-201ENST00000604082 446 ntBASIC1.02□□□□□ -2.25
PDGFRAP16234 JPX_2.1-201ENST00000614161 69 ntBASIC1.02□□□□□ -2.25
PDGFRAP16234 RNU4-90P-201ENST00000362773 141 ntBASIC1.01□□□□□ -2.25
PDGFRAP16234 snoU2_19.2-201ENST00000363024 80 ntBASIC1.01□□□□□ -2.25
PDGFRAP16234 Y_RNA.136-201ENST00000363444 102 ntBASIC1.01□□□□□ -2.25
PDGFRAP16234 Y_RNA.276-201ENST00000364732 109 ntBASIC1.01□□□□□ -2.25
PDGFRAP16234 SNORA33.2-201ENST00000365413 134 ntBASIC1.01□□□□□ -2.25
PDGFRAP16234 SNORA72.4-201ENST00000384174 132 ntBASIC1.01□□□□□ -2.25
PDGFRAP16234 MIR200A-201ENST00000384875 90 ntBASIC1.01□□□□□ -2.25
PDGFRAP16234 SNORA26.5-201ENST00000391215 123 ntBASIC1.01□□□□□ -2.25
PDGFRAP16234 MTCO1P5-201ENST00000433573 344 ntBASIC1.01□□□□□ -2.25
PDGFRAP16234 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC1.01□□□□□ -2.25
PDGFRAP16234 RNU7-141P-201ENST00000459304 62 ntBASIC1.01□□□□□ -2.25
PDGFRAP16234 AC098869.1-201ENST00000481627 292 ntBASIC1.01□□□□□ -2.25
PDGFRAP16234 Y_RNA.673-201ENST00000516306 88 ntBASIC1.01□□□□□ -2.25
PDGFRAP16234 RNU7-43P-201ENST00000516554 64 ntBASIC1.01□□□□□ -2.25
PDGFRAP16234 SNORA40.15-201ENST00000516884 107 ntBASIC1.01□□□□□ -2.25
PDGFRAP16234 SNORA18.7-201ENST00000516910 131 ntBASIC1.01□□□□□ -2.25
PDGFRAP16234 MIR4764-201ENST00000580680 88 ntBASIC1.01□□□□□ -2.25
PDGFRAP16234 MIR2681-201ENST00000581814 105 ntBASIC1.01□□□□□ -2.25
PDGFRAP16234 MIR4452-201ENST00000583004 71 ntBASIC1.01□□□□□ -2.25
PDGFRAP16234 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC1.01□□□□□ -2.25
PDGFRAP16234 AC008163.1-202ENST00000636004 2889 ntBASIC1.01□□□□□ -2.25
PDGFRAP16234 RNA5SP264-201ENST00000363115 107 ntBASIC1□□□□□ -2.25
PDGFRAP16234 RNU6-1209P-201ENST00000363655 107 ntBASIC1□□□□□ -2.25
PDGFRAP16234 RNU6-674P-201ENST00000363831 107 ntBASIC1□□□□□ -2.25
PDGFRAP16234 SNORD14E-201ENST00000364009 85 ntBASIC1□□□□□ -2.25
PDGFRAP16234 Y_RNA.202-201ENST00000364083 110 ntBASIC1□□□□□ -2.25
PDGFRAP16234 Y_RNA.796-201ENST00000364268 102 ntBASIC1□□□□□ -2.25
PDGFRAP16234 Y_RNA.224-201ENST00000364308 111 ntBASIC1□□□□□ -2.25
PDGFRAP16234 RNU1-93P-201ENST00000364704 169 ntBASIC1□□□□□ -2.25
PDGFRAP16234 Y_RNA.799-201ENST00000364992 102 ntBASIC1□□□□□ -2.25
PDGFRAP16234 SNORD114-24-201ENST00000365029 72 ntBASIC1□□□□□ -2.25
PDGFRAP16234 RNU6-290P-201ENST00000365212 101 ntBASIC1□□□□□ -2.25
PDGFRAP16234 RNU6-1227P-201ENST00000383981 107 ntBASIC1□□□□□ -2.25
PDGFRAP16234 MIR215-201ENST00000384858 110 ntBASIC1□□□□□ -2.25
PDGFRAP16234 SNORA75.2-201ENST00000391138 150 ntBASIC1□□□□□ -2.25
PDGFRAP16234 SNORA75.3-201ENST00000391231 150 ntBASIC1□□□□□ -2.25
PDGFRAP16234 RNU7-90P-201ENST00000459216 62 ntBASIC1□□□□□ -2.25
PDGFRAP16234 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC1□□□□□ -2.25
PDGFRAP16234 RNU6-764P-201ENST00000516396 105 ntBASIC1□□□□□ -2.25
PDGFRAP16234 AP003716.2-201ENST00000528260 108 ntBASIC1□□□□□ -2.25
PDGFRAP16234 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC1□□□□□ -2.25
PDGFRAP16234 AC005357.1-201ENST00000588399 301 ntBASIC1□□□□□ -2.25
PDGFRAP16234 AC103810.9-201ENST00000606688 112 ntBASIC1□□□□□ -2.25
PDGFRAP16234 AC134026.1-201ENST00000623249 2239 ntBASIC0.99□□□□□ -2.25
PDGFRAP16234 Y_RNA.11-201ENST00000362375 109 ntBASIC0.99□□□□□ -2.25
PDGFRAP16234 Y_RNA.19-201ENST00000362462 99 ntBASIC0.99□□□□□ -2.25
PDGFRAP16234 RNU6-770P-201ENST00000363929 105 ntBASIC0.99□□□□□ -2.25
PDGFRAP16234 Y_RNA.541-201ENST00000384640 113 ntBASIC0.99□□□□□ -2.25
PDGFRAP16234 Y_RNA.569-201ENST00000384749 103 ntBASIC0.99□□□□□ -2.25
PDGFRAP16234 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC0.99□□□□□ -2.25
PDGFRAP16234 RNU6-437P-201ENST00000459408 95 ntBASIC0.99□□□□□ -2.25
PDGFRAP16234 SNORD123-201ENST00000459473 70 ntBASIC0.99□□□□□ -2.25
PDGFRAP16234 SNORD124-201ENST00000459577 104 ntBASIC0.99□□□□□ -2.25
PDGFRAP16234 MRPS35P2-201ENST00000508242 191 ntBASIC0.99□□□□□ -2.25
PDGFRAP16234 RNY3P15-201ENST00000516297 97 ntBASIC0.99□□□□□ -2.25
PDGFRAP16234 RNU6-113P-201ENST00000516653 101 ntBASIC0.99□□□□□ -2.25
PDGFRAP16234 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.99□□□□□ -2.25
PDGFRAP16234 AC044792.1-201ENST00000593294 196 ntBASIC0.99□□□□□ -2.25
PDGFRAP16234 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.98□□□□□ -2.25
PDGFRAP16234 SNORA36B-201ENST00000410438 131 ntBASIC0.98□□□□□ -2.25
PDGFRAP16234 AC005534.2-201ENST00000431047 433 ntBASIC0.98□□□□□ -2.25
PDGFRAP16234 NDUFA4P2-201ENST00000489989 244 ntBASIC0.98□□□□□ -2.25
PDGFRAP16234 RNU7-41P-201ENST00000515917 61 ntBASIC0.98□□□□□ -2.25
PDGFRAP16234 AC068700.1-201ENST00000565862 3754 ntBASIC0.98□□□□□ -2.25
PDGFRAP16234 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC0.97□□□□□ -2.25
PDGFRAP16234 Y_RNA.64-201ENST00000362845 102 ntBASIC0.97□□□□□ -2.25
PDGFRAP16234 RNU6-1187P-201ENST00000364771 110 ntBASIC0.97□□□□□ -2.25
PDGFRAP16234 RNU6-442P-201ENST00000383968 104 ntBASIC0.97□□□□□ -2.25
PDGFRAP16234 SNORD38C-201ENST00000384381 69 ntBASIC0.97□□□□□ -2.25
PDGFRAP16234 RNU6-763P-201ENST00000390865 106 ntBASIC0.97□□□□□ -2.25
PDGFRAP16234 MTCO2P33-201ENST00000402100 465 ntBASIC0.97□□□□□ -2.25
PDGFRAP16234 MIR1278-201ENST00000408753 81 ntBASIC0.97□□□□□ -2.25
PDGFRAP16234 RNU6-985P-201ENST00000410182 104 ntBASIC0.97□□□□□ -2.25
PDGFRAP16234 POLR2J4-204ENST00000418424 324 ntBASIC0.97□□□□□ -2.25
PDGFRAP16234 AL020996.3-201ENST00000606617 222 ntBASIC0.97□□□□□ -2.25
PDGFRAP16234 Y_RNA.16-201ENST00000362421 102 ntBASIC0.96□□□□□ -2.26
PDGFRAP16234 RNA5SP48-201ENST00000363969 126 ntBASIC0.96□□□□□ -2.26
PDGFRAP16234 RNU6-639P-201ENST00000384074 107 ntBASIC0.96□□□□□ -2.26
PDGFRAP16234 MIR520E-201ENST00000384867 87 ntBASIC0.96□□□□□ -2.26
PDGFRAP16234 AC113618.1-201ENST00000416747 285 ntBASIC0.96□□□□□ -2.26
PDGFRAP16234 SNRPGP14-201ENST00000435400 219 ntBASIC0.96□□□□□ -2.26
PDGFRAP16234 MTND5P22-201ENST00000458380 195 ntBASIC0.96□□□□□ -2.26
PDGFRAP16234 RNU6-830P-201ENST00000516353 107 ntBASIC0.96□□□□□ -2.26
PDGFRAP16234 AP003733.2-201ENST00000529409 171 ntBASIC0.96□□□□□ -2.26
PDGFRAP16234 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC0.96□□□□□ -2.26
PDGFRAP16234 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC0.96□□□□□ -2.26
PDGFRAP16234 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.96□□□□□ -2.26
PDGFRAP16234 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
PDGFRAP16234 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.96□□□□□ -2.26
PDGFRAP16234 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.95□□□□□ -2.26
PDGFRAP16234 MIR103A2-201ENST00000362154 78 ntBASIC0.95□□□□□ -2.26
PDGFRAP16234 RNU1-36P-201ENST00000365130 165 ntBASIC0.95□□□□□ -2.26
PDGFRAP16234 MIR532-201ENST00000385025 91 ntBASIC0.95□□□□□ -2.26
PDGFRAP16234 MIR1185-1-201ENST00000408598 86 ntBASIC0.95□□□□□ -2.26
PDGFRAP16234 Y_RNA.637-201ENST00000459424 114 ntBASIC0.95□□□□□ -2.26
PDGFRAP16234 AC091959.1-201ENST00000495857 238 ntBASIC0.95□□□□□ -2.26
PDGFRAP16234 RNU6-1007P-201ENST00000516586 107 ntBASIC0.95□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 140.6 ms