Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 AC004965.1-201ENST00000413033 213 ntBASIC1.85□□□□□ -2.11
HOXC6P09630 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.85□□□□□ -2.11
HOXC6P09630 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.85□□□□□ -2.11
HOXC6P09630 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.85□□□□□ -2.11
HOXC6P09630 AC055731.1-201ENST00000474387 401 ntBASIC1.85□□□□□ -2.11
HOXC6P09630 RN7SL274P-201ENST00000492268 272 ntBASIC1.85□□□□□ -2.11
HOXC6P09630 RNU7-200P-201ENST00000516105 62 ntBASIC1.85□□□□□ -2.11
HOXC6P09630 RNA5SP364-201ENST00000516938 78 ntBASIC1.85□□□□□ -2.11
HOXC6P09630 RNU2-19P-201ENST00000517288 84 ntBASIC1.85□□□□□ -2.11
HOXC6P09630 MIR5688-201ENST00000580619 83 ntBASIC1.85□□□□□ -2.11
HOXC6P09630 BX248123.2-201ENST00000606318 124 ntBASIC1.85□□□□□ -2.11
HOXC6P09630 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
HOXC6P09630 MIR517C-201ENST00000385103 95 ntBASIC1.84□□□□□ -2.11
HOXC6P09630 AC006461.1-201ENST00000412637 326 ntBASIC1.84□□□□□ -2.11
HOXC6P09630 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.84□□□□□ -2.11
HOXC6P09630 MIR4431-201ENST00000579990 94 ntBASIC1.84□□□□□ -2.11
HOXC6P09630 AL391903.3-201ENST00000612158 163 ntBASIC1.84□□□□□ -2.11
HOXC6P09630 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.84□□□□□ -2.11
HOXC6P09630 AC100821.1-201ENST00000523153 2479 ntBASIC1.84□□□□□ -2.12
HOXC6P09630 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.84□□□□□ -2.12
HOXC6P09630 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.84□□□□□ -2.12
HOXC6P09630 AC018630.2-201ENST00000534866 2403 ntBASIC1.83□□□□□ -2.12
HOXC6P09630 RNU1-42P-201ENST00000364033 160 ntBASIC1.83□□□□□ -2.12
HOXC6P09630 Y_RNA.327-201ENST00000365201 102 ntBASIC1.83□□□□□ -2.12
HOXC6P09630 MIR15B-201ENST00000385045 98 ntBASIC1.83□□□□□ -2.12
HOXC6P09630 MIR1283-2-201ENST00000408621 87 ntBASIC1.83□□□□□ -2.12
HOXC6P09630 CST2P1-201ENST00000425770 87 ntBASIC1.83□□□□□ -2.12
HOXC6P09630 RNA5SP272-201ENST00000516095 111 ntBASIC1.83□□□□□ -2.12
HOXC6P09630 Y_RNA.703-201ENST00000516846 111 ntBASIC1.83□□□□□ -2.12
HOXC6P09630 MIR4287-201ENST00000579398 78 ntBASIC1.83□□□□□ -2.12
HOXC6P09630 AL021707.8-201ENST00000609428 183 ntBASIC1.83□□□□□ -2.12
HOXC6P09630 MIR3658-201ENST00000636291 56 ntBASIC1.83□□□□□ -2.12
HOXC6P09630 ZNF702P-202ENST00000434269 1966 ntBASIC1.83□□□□□ -2.12
HOXC6P09630 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
HOXC6P09630 Y_RNA.116-201ENST00000363292 103 ntBASIC1.82□□□□□ -2.12
HOXC6P09630 SNORD45.3-201ENST00000363836 72 ntBASIC1.82□□□□□ -2.12
HOXC6P09630 RNU6-728P-201ENST00000365375 104 ntBASIC1.82□□□□□ -2.12
HOXC6P09630 MIR520G-201ENST00000385064 90 ntBASIC1.82□□□□□ -2.12
HOXC6P09630 MIR676-201ENST00000390702 67 ntBASIC1.82□□□□□ -2.12
HOXC6P09630 RNA5SP109-201ENST00000391010 116 ntBASIC1.82□□□□□ -2.12
HOXC6P09630 RN7SKP101-201ENST00000411376 320 ntBASIC1.82□□□□□ -2.12
HOXC6P09630 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.82□□□□□ -2.12
HOXC6P09630 MLLT10P1-201ENST00000418346 262 ntBASIC1.82□□□□□ -2.12
HOXC6P09630 AC009474.2-201ENST00000451383 136 ntBASIC1.82□□□□□ -2.12
HOXC6P09630 RNVU1-2-201ENST00000516326 135 ntBASIC1.82□□□□□ -2.12
HOXC6P09630 AC024614.2-201ENST00000577584 372 ntBASIC1.82□□□□□ -2.12
HOXC6P09630 MIR5094-201ENST00000578766 85 ntBASIC1.82□□□□□ -2.12
HOXC6P09630 AC022217.4-201ENST00000604389 163 ntBASIC1.82□□□□□ -2.12
HOXC6P09630 AL627230.6-201ENST00000611129 280 ntBASIC1.82□□□□□ -2.12
HOXC6P09630 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.82□□□□□ -2.12
HOXC6P09630 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.82□□□□□ -2.12
HOXC6P09630 ICE2P2-201ENST00000483823 2787 ntBASIC1.81□□□□□ -2.12
HOXC6P09630 SNORA1B-201ENST00000362535 133 ntBASIC1.81□□□□□ -2.12
HOXC6P09630 RNU6-151P-201ENST00000364158 107 ntBASIC1.81□□□□□ -2.12
HOXC6P09630 RNU6-449P-201ENST00000383914 107 ntBASIC1.81□□□□□ -2.12
HOXC6P09630 MIR518A2-201ENST00000384966 87 ntBASIC1.81□□□□□ -2.12
HOXC6P09630 MIR29C-201ENST00000385231 88 ntBASIC1.81□□□□□ -2.12
HOXC6P09630 SNORA12.1-201ENST00000390873 148 ntBASIC1.81□□□□□ -2.12
HOXC6P09630 RNU6-239P-201ENST00000390990 99 ntBASIC1.81□□□□□ -2.12
HOXC6P09630 Y_RNA.580-201ENST00000391004 95 ntBASIC1.81□□□□□ -2.12
HOXC6P09630 RNA5SP496-201ENST00000391240 109 ntBASIC1.81□□□□□ -2.12
HOXC6P09630 AL512604.1-201ENST00000404812 257 ntBASIC1.81□□□□□ -2.12
HOXC6P09630 MIR1276-201ENST00000408707 83 ntBASIC1.81□□□□□ -2.12
HOXC6P09630 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
HOXC6P09630 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.81□□□□□ -2.12
HOXC6P09630 SNORD11-201ENST00000459124 84 ntBASIC1.81□□□□□ -2.12
HOXC6P09630 RPS26P45-201ENST00000471748 340 ntBASIC1.81□□□□□ -2.12
HOXC6P09630 SNORD116-25-201ENST00000516517 92 ntBASIC1.81□□□□□ -2.12
HOXC6P09630 RNU6-341P-201ENST00000516973 96 ntBASIC1.81□□□□□ -2.12
HOXC6P09630 AC084364.2-201ENST00000546924 395 ntBASIC1.81□□□□□ -2.12
HOXC6P09630 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.81□□□□□ -2.12
HOXC6P09630 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
HOXC6P09630 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
HOXC6P09630 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.8□□□□□ -2.12
HOXC6P09630 Y_RNA.253-201ENST00000364562 112 ntBASIC1.8□□□□□ -2.12
HOXC6P09630 MIR518E-201ENST00000385252 88 ntBASIC1.8□□□□□ -2.12
HOXC6P09630 RPS27P1-201ENST00000450552 247 ntBASIC1.8□□□□□ -2.12
HOXC6P09630 NDUFA4P2-201ENST00000489989 244 ntBASIC1.8□□□□□ -2.12
HOXC6P09630 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.8□□□□□ -2.12
HOXC6P09630 MRPS17P9-201ENST00000511924 393 ntBASIC1.8□□□□□ -2.12
HOXC6P09630 AC005786.1-201ENST00000588553 154 ntBASIC1.8□□□□□ -2.12
HOXC6P09630 AL096840.1-201ENST00000603287 93 ntBASIC1.8□□□□□ -2.12
HOXC6P09630 uc_338.4-201ENST00000616635 176 ntBASIC1.8□□□□□ -2.12
HOXC6P09630 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
HOXC6P09630 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.8□□□□□ -2.12
HOXC6P09630 RNU6-1336P-201ENST00000383886 109 ntBASIC1.79□□□□□ -2.12
HOXC6P09630 RNU6-643P-201ENST00000384018 107 ntBASIC1.79□□□□□ -2.12
HOXC6P09630 SNORA67.6-201ENST00000391093 99 ntBASIC1.79□□□□□ -2.12
HOXC6P09630 SNRPGP10-201ENST00000432323 225 ntBASIC1.79□□□□□ -2.12
HOXC6P09630 AC245047.4-201ENST00000433189 144 ntBASIC1.79□□□□□ -2.12
HOXC6P09630 AL049830.1-201ENST00000468034 425 ntBASIC1.79□□□□□ -2.12
HOXC6P09630 HMGN1P7-201ENST00000491722 313 ntBASIC1.79□□□□□ -2.12
HOXC6P09630 RNU7-121P-201ENST00000516604 62 ntBASIC1.79□□□□□ -2.12
HOXC6P09630 MIR2681-201ENST00000581814 105 ntBASIC1.79□□□□□ -2.12
HOXC6P09630 JPX_2.1-201ENST00000614161 69 ntBASIC1.79□□□□□ -2.12
HOXC6P09630 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.79□□□□□ -2.12
HOXC6P09630 AL591926.4-201ENST00000616895 298 ntBASIC1.79□□□□□ -2.12
HOXC6P09630 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
HOXC6P09630 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
HOXC6P09630 AL157777.2-201ENST00000258070 137 ntBASIC1.78□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms