Protein–RNA interactions for Protein: P08138

NGFR, Tumor necrosis factor receptor superfamily member 16, humanhuman

Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NGFRP08138 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.8□□□□□ -2.12
NGFRP08138 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
NGFRP08138 SNORD115-3-201ENST00000363100 82 ntBASIC1.8□□□□□ -2.12
NGFRP08138 Y_RNA.294-201ENST00000364916 102 ntBASIC1.8□□□□□ -2.12
NGFRP08138 RNU6-915P-201ENST00000364943 103 ntBASIC1.8□□□□□ -2.12
NGFRP08138 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
NGFRP08138 AC023449.1-201ENST00000454464 154 ntBASIC1.8□□□□□ -2.12
NGFRP08138 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.8□□□□□ -2.12
NGFRP08138 Y_RNA.686-201ENST00000516548 134 ntBASIC1.8□□□□□ -2.12
NGFRP08138 MIR514B-201ENST00000516774 80 ntBASIC1.8□□□□□ -2.12
NGFRP08138 RNU2-60P-201ENST00000517290 128 ntBASIC1.8□□□□□ -2.12
NGFRP08138 AC024995.1-201ENST00000523014 93 ntBASIC1.8□□□□□ -2.12
NGFRP08138 AL358944.1-201ENST00000528537 144 ntBASIC1.8□□□□□ -2.12
NGFRP08138 AP001328.1-201ENST00000528550 176 ntBASIC1.8□□□□□ -2.12
NGFRP08138 AC008507.4-201ENST00000585464 127 ntBASIC1.8□□□□□ -2.12
NGFRP08138 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC1.8□□□□□ -2.12
NGFRP08138 TUG1_4.1-201ENST00000619464 181 ntBASIC1.8□□□□□ -2.12
NGFRP08138 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
NGFRP08138 AL359851.1-201ENST00000569460 4997 ntBASIC1.79□□□□□ -2.12
NGFRP08138 U8.1-201ENST00000362843 134 ntBASIC1.79□□□□□ -2.12
NGFRP08138 RNU6-23P-201ENST00000363283 107 ntBASIC1.79□□□□□ -2.12
NGFRP08138 SNORA25.7-201ENST00000364375 127 ntBASIC1.79□□□□□ -2.12
NGFRP08138 MIR539-201ENST00000365690 78 ntBASIC1.79□□□□□ -2.12
NGFRP08138 Y_RNA.525-201ENST00000384570 113 ntBASIC1.79□□□□□ -2.12
NGFRP08138 Y_RNA.584-201ENST00000391090 114 ntBASIC1.79□□□□□ -2.12
NGFRP08138 RNA5SP323-201ENST00000391094 133 ntBASIC1.79□□□□□ -2.12
NGFRP08138 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.79□□□□□ -2.12
NGFRP08138 BX510359.4-201ENST00000423750 193 ntBASIC1.79□□□□□ -2.12
NGFRP08138 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.79□□□□□ -2.12
NGFRP08138 RNA5SP233-201ENST00000459153 113 ntBASIC1.79□□□□□ -2.12
NGFRP08138 U7.2-201ENST00000607576 63 ntBASIC1.79□□□□□ -2.12
NGFRP08138 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.79□□□□□ -2.12
NGFRP08138 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.79□□□□□ -2.12
NGFRP08138 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.78□□□□□ -2.12
NGFRP08138 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
NGFRP08138 MIR126-201ENST00000362291 85 ntBASIC1.78□□□□□ -2.12
NGFRP08138 RNU6-508P-201ENST00000363231 103 ntBASIC1.78□□□□□ -2.12
NGFRP08138 SNORA1-201ENST00000384107 130 ntBASIC1.78□□□□□ -2.12
NGFRP08138 RNU6-80P-201ENST00000384195 107 ntBASIC1.78□□□□□ -2.12
NGFRP08138 MIR515-2-201ENST00000384883 83 ntBASIC1.78□□□□□ -2.12
NGFRP08138 MIR515-1-201ENST00000384884 83 ntBASIC1.78□□□□□ -2.12
NGFRP08138 MIR522-201ENST00000385071 87 ntBASIC1.78□□□□□ -2.12
NGFRP08138 RNU2-40P-201ENST00000410833 196 ntBASIC1.78□□□□□ -2.12
NGFRP08138 RNU7-107P-201ENST00000459121 61 ntBASIC1.78□□□□□ -2.12
NGFRP08138 AC090142.3-201ENST00000519012 385 ntBASIC1.78□□□□□ -2.12
NGFRP08138 AP002004.2-201ENST00000531656 154 ntBASIC1.78□□□□□ -2.12
NGFRP08138 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC1.78□□□□□ -2.12
NGFRP08138 AC026271.5-201ENST00000577873 130 ntBASIC1.78□□□□□ -2.12
NGFRP08138 MIR4662B-201ENST00000579498 81 ntBASIC1.78□□□□□ -2.12
NGFRP08138 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC1.78□□□□□ -2.12
NGFRP08138 AC011603.4-201ENST00000611325 277 ntBASIC1.78□□□□□ -2.12
NGFRP08138 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.78□□□□□ -2.12
NGFRP08138 AC008555.8-201ENST00000623602 2168 ntBASIC1.78□□□□□ -2.13
NGFRP08138 RNU1-58P-201ENST00000362413 163 ntBASIC1.77□□□□□ -2.13
NGFRP08138 Y_RNA.280-201ENST00000364765 112 ntBASIC1.77□□□□□ -2.13
NGFRP08138 MIR548A2-201ENST00000384956 97 ntBASIC1.77□□□□□ -2.13
NGFRP08138 AL049830.1-201ENST00000468034 425 ntBASIC1.77□□□□□ -2.13
NGFRP08138 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.77□□□□□ -2.13
NGFRP08138 RNU6-659P-201ENST00000516454 104 ntBASIC1.77□□□□□ -2.13
NGFRP08138 MIR3945-201ENST00000581853 98 ntBASIC1.77□□□□□ -2.13
NGFRP08138 MIR4448-201ENST00000584360 86 ntBASIC1.77□□□□□ -2.13
NGFRP08138 AL365205.2-201ENST00000594586 68 ntBASIC1.77□□□□□ -2.13
NGFRP08138 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.77□□□□□ -2.13
NGFRP08138 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.77□□□□□ -2.13
NGFRP08138 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
NGFRP08138 SNORD114-1-201ENST00000362705 72 ntBASIC1.76□□□□□ -2.13
NGFRP08138 SNORD61-201ENST00000384252 73 ntBASIC1.76□□□□□ -2.13
NGFRP08138 MIR518A2-201ENST00000384966 87 ntBASIC1.76□□□□□ -2.13
NGFRP08138 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
NGFRP08138 RNA5SP109-201ENST00000391010 116 ntBASIC1.76□□□□□ -2.13
NGFRP08138 RNU11-5P-201ENST00000391216 129 ntBASIC1.76□□□□□ -2.13
NGFRP08138 SNORA26-201ENST00000391286 122 ntBASIC1.76□□□□□ -2.13
NGFRP08138 AC019129.1-201ENST00000403786 261 ntBASIC1.76□□□□□ -2.13
NGFRP08138 MIR1283-2-201ENST00000408621 87 ntBASIC1.76□□□□□ -2.13
NGFRP08138 MLLT10P1-201ENST00000418346 262 ntBASIC1.76□□□□□ -2.13
NGFRP08138 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.76□□□□□ -2.13
NGFRP08138 RNU7-94P-201ENST00000459576 63 ntBASIC1.76□□□□□ -2.13
NGFRP08138 RNU4-57P-201ENST00000515980 135 ntBASIC1.76□□□□□ -2.13
NGFRP08138 RNA5SP182-201ENST00000516064 82 ntBASIC1.76□□□□□ -2.13
NGFRP08138 Y_RNA.666-201ENST00000516187 112 ntBASIC1.76□□□□□ -2.13
NGFRP08138 RNU6-365P-201ENST00000517113 106 ntBASIC1.76□□□□□ -2.13
NGFRP08138 AC131055.1-201ENST00000584626 316 ntBASIC1.76□□□□□ -2.13
NGFRP08138 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC1.76□□□□□ -2.13
NGFRP08138 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
NGFRP08138 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.76□□□□□ -2.13
NGFRP08138 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
NGFRP08138 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC1.75□□□□□ -2.13
NGFRP08138 Y_RNA.52-201ENST00000362760 96 ntBASIC1.75□□□□□ -2.13
NGFRP08138 Y_RNA.120-201ENST00000363304 110 ntBASIC1.75□□□□□ -2.13
NGFRP08138 SNORD50B-201ENST00000364995 70 ntBASIC1.75□□□□□ -2.13
NGFRP08138 MIR597-201ENST00000384968 97 ntBASIC1.75□□□□□ -2.13
NGFRP08138 MIR624-201ENST00000385217 97 ntBASIC1.75□□□□□ -2.13
NGFRP08138 RNA5SP450-201ENST00000411206 102 ntBASIC1.75□□□□□ -2.13
NGFRP08138 Y_RNA.629-201ENST00000411368 105 ntBASIC1.75□□□□□ -2.13
NGFRP08138 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.75□□□□□ -2.13
NGFRP08138 MTATP6P29-201ENST00000415057 132 ntBASIC1.75□□□□□ -2.13
NGFRP08138 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC1.75□□□□□ -2.13
NGFRP08138 FTH1P12-201ENST00000432137 551 ntBASIC1.75□□□□□ -2.13
NGFRP08138 RNU6-126P-201ENST00000516685 103 ntBASIC1.75□□□□□ -2.13
NGFRP08138 RNU6-1270P-201ENST00000517128 108 ntBASIC1.75□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 134 ms