Protein–RNA interactions for Protein: P08100

RHO, Rhodopsin, humanhuman

Predictions only

Length 348 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHOP08100 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC2.06□□□□□ -2.08
RHOP08100 AC008507.4-201ENST00000585464 127 ntBASIC2.06□□□□□ -2.08
RHOP08100 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.06□□□□□ -2.08
RHOP08100 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
RHOP08100 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.05□□□□□ -2.08
RHOP08100 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.05□□□□□ -2.08
RHOP08100 AL596028.1-201ENST00000326971 197 ntBASIC2.05□□□□□ -2.08
RHOP08100 MIR126-201ENST00000362291 85 ntBASIC2.05□□□□□ -2.08
RHOP08100 Y_RNA.140-201ENST00000363474 103 ntBASIC2.05□□□□□ -2.08
RHOP08100 SNORA63D-201ENST00000364359 132 ntBASIC2.05□□□□□ -2.08
RHOP08100 Y_RNA.521-201ENST00000384560 114 ntBASIC2.05□□□□□ -2.08
RHOP08100 RNU2-70P-201ENST00000410718 179 ntBASIC2.05□□□□□ -2.08
RHOP08100 RNU7-197P-201ENST00000458836 62 ntBASIC2.05□□□□□ -2.08
RHOP08100 RPL23AP63-201ENST00000498752 471 ntBASIC2.05□□□□□ -2.08
RHOP08100 MRPS17P9-201ENST00000511924 393 ntBASIC2.05□□□□□ -2.08
RHOP08100 Y_RNA.714-201ENST00000517065 90 ntBASIC2.05□□□□□ -2.08
RHOP08100 MIR5089-201ENST00000580047 84 ntBASIC2.05□□□□□ -2.08
RHOP08100 AC120024.3-201ENST00000603167 156 ntBASIC2.05□□□□□ -2.08
RHOP08100 Pinc.1-201ENST00000616452 154 ntBASIC2.05□□□□□ -2.08
RHOP08100 U2.22-201ENST00000636441 106 ntBASIC2.05□□□□□ -2.08
RHOP08100 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.05□□□□□ -2.08
RHOP08100 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.05□□□□□ -2.08
RHOP08100 ZNF702P-202ENST00000434269 1966 ntBASIC2.05□□□□□ -2.08
RHOP08100 AC008555.8-201ENST00000623602 2168 ntBASIC2.05□□□□□ -2.08
RHOP08100 RNU6-199P-201ENST00000362954 107 ntBASIC2.04□□□□□ -2.08
RHOP08100 Y_RNA.91-201ENST00000363042 107 ntBASIC2.04□□□□□ -2.08
RHOP08100 Y_RNA.497-201ENST00000384447 98 ntBASIC2.04□□□□□ -2.08
RHOP08100 SNORA19-201ENST00000384737 128 ntBASIC2.04□□□□□ -2.08
RHOP08100 SNORA12.1-201ENST00000390873 148 ntBASIC2.04□□□□□ -2.08
RHOP08100 RNA5SP109-201ENST00000391010 116 ntBASIC2.04□□□□□ -2.08
RHOP08100 RNA5SP482-201ENST00000391269 118 ntBASIC2.04□□□□□ -2.08
RHOP08100 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC2.04□□□□□ -2.08
RHOP08100 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC2.04□□□□□ -2.08
RHOP08100 AC104435.1-201ENST00000483483 166 ntBASIC2.04□□□□□ -2.08
RHOP08100 RNU6-426P-201ENST00000516464 97 ntBASIC2.04□□□□□ -2.08
RHOP08100 AC112693.2-201ENST00000556538 232 ntBASIC2.04□□□□□ -2.08
RHOP08100 ZNF720P1-201ENST00000562403 1939 ntBASIC2.04□□□□□ -2.08
RHOP08100 MIR5094-201ENST00000578766 85 ntBASIC2.04□□□□□ -2.08
RHOP08100 SNRPGP19-201ENST00000603826 189 ntBASIC2.04□□□□□ -2.08
RHOP08100 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
RHOP08100 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
RHOP08100 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.04□□□□□ -2.08
RHOP08100 Y_RNA.66-201ENST00000362862 102 ntBASIC2.03□□□□□ -2.08
RHOP08100 SNORA16B-201ENST00000364674 135 ntBASIC2.03□□□□□ -2.08
RHOP08100 Y_RNA.486-201ENST00000384398 107 ntBASIC2.03□□□□□ -2.08
RHOP08100 MIR513C-201ENST00000401352 84 ntBASIC2.03□□□□□ -2.08
RHOP08100 RPL30P13-201ENST00000418873 348 ntBASIC2.03□□□□□ -2.08
RHOP08100 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC2.03□□□□□ -2.08
RHOP08100 AC079804.2-201ENST00000490376 200 ntBASIC2.03□□□□□ -2.08
RHOP08100 SUB1P4-201ENST00000566062 339 ntBASIC2.03□□□□□ -2.08
RHOP08100 AP000942.3-201ENST00000603702 160 ntBASIC2.03□□□□□ -2.08
RHOP08100 MIR8054-201ENST00000620877 86 ntBASIC2.03□□□□□ -2.08
RHOP08100 MIR6844-201ENST00000637122 62 ntBASIC2.03□□□□□ -2.08
RHOP08100 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
RHOP08100 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
RHOP08100 MIR17-201ENST00000385012 84 ntBASIC2.02□□□□□ -2.09
RHOP08100 SNORD72-201ENST00000390994 80 ntBASIC2.02□□□□□ -2.09
RHOP08100 SNORD37.2-201ENST00000391075 66 ntBASIC2.02□□□□□ -2.09
RHOP08100 Y_RNA.586-201ENST00000391146 98 ntBASIC2.02□□□□□ -2.09
RHOP08100 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC2.02□□□□□ -2.09
RHOP08100 RNVU1-2-201ENST00000516326 135 ntBASIC2.02□□□□□ -2.09
RHOP08100 MIR4287-201ENST00000579398 78 ntBASIC2.02□□□□□ -2.09
RHOP08100 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC2.02□□□□□ -2.09
RHOP08100 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.02□□□□□ -2.09
RHOP08100 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.01□□□□□ -2.09
RHOP08100 AC010332.2-201ENST00000613083 1904 ntBASIC2.01□□□□□ -2.09
RHOP08100 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
RHOP08100 SNORA25.7-201ENST00000364375 127 ntBASIC2.01□□□□□ -2.09
RHOP08100 SNORD24-201ENST00000383884 75 ntBASIC2.01□□□□□ -2.09
RHOP08100 RNU6-950P-201ENST00000384651 107 ntBASIC2.01□□□□□ -2.09
RHOP08100 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
RHOP08100 AC003989.2-201ENST00000440224 169 ntBASIC2.01□□□□□ -2.09
RHOP08100 SNORA25.12-201ENST00000516202 82 ntBASIC2.01□□□□□ -2.09
RHOP08100 SNORA31.10-201ENST00000516482 106 ntBASIC2.01□□□□□ -2.09
RHOP08100 RNU6-365P-201ENST00000517113 106 ntBASIC2.01□□□□□ -2.09
RHOP08100 AL365205.2-201ENST00000594586 68 ntBASIC2.01□□□□□ -2.09
RHOP08100 SNORA28-201ENST00000606769 126 ntBASIC2.01□□□□□ -2.09
RHOP08100 AL442644.1-201ENST00000454390 3105 ntBASIC2□□□□□ -2.09
RHOP08100 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2□□□□□ -2.09
RHOP08100 Y_RNA.251-201ENST00000364551 99 ntBASIC2□□□□□ -2.09
RHOP08100 RNU6-440P-201ENST00000390882 105 ntBASIC2□□□□□ -2.09
RHOP08100 RNU6-257P-201ENST00000410238 98 ntBASIC2□□□□□ -2.09
RHOP08100 RNA5SP501-201ENST00000410990 112 ntBASIC2□□□□□ -2.09
RHOP08100 RNA5SP450-201ENST00000411206 102 ntBASIC2□□□□□ -2.09
RHOP08100 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2□□□□□ -2.09
RHOP08100 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC2□□□□□ -2.09
RHOP08100 AC092991.1-201ENST00000477176 376 ntBASIC2□□□□□ -2.09
RHOP08100 RPS27P21-201ENST00000486977 252 ntBASIC2□□□□□ -2.09
RHOP08100 AC007751.1-201ENST00000529260 376 ntBASIC2□□□□□ -2.09
RHOP08100 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2□□□□□ -2.09
RHOP08100 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2□□□□□ -2.09
RHOP08100 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
RHOP08100 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
RHOP08100 SNORD68-201ENST00000363214 84 ntBASIC1.99□□□□□ -2.09
RHOP08100 RNU6-1082P-201ENST00000364574 107 ntBASIC1.99□□□□□ -2.09
RHOP08100 Y_RNA.265-201ENST00000364677 108 ntBASIC1.99□□□□□ -2.09
RHOP08100 Y_RNA.338-201ENST00000365320 114 ntBASIC1.99□□□□□ -2.09
RHOP08100 RNU4-52P-201ENST00000384209 138 ntBASIC1.99□□□□□ -2.09
RHOP08100 RNU6-296P-201ENST00000384608 107 ntBASIC1.99□□□□□ -2.09
RHOP08100 MIR520A-201ENST00000384862 85 ntBASIC1.99□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms