Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 AL512605.2-201ENST00000592972 256 ntBASIC1.31□□□□□ -2.2
RB1P06400 MIR6788-201ENST00000618842 66 ntBASIC1.31□□□□□ -2.2
RB1P06400 RNU6-1209P-201ENST00000363655 107 ntBASIC1.3□□□□□ -2.2
RB1P06400 RNU6-674P-201ENST00000363831 107 ntBASIC1.3□□□□□ -2.2
RB1P06400 RNU6-899P-201ENST00000363947 107 ntBASIC1.3□□□□□ -2.2
RB1P06400 Y_RNA.422-201ENST00000384054 114 ntBASIC1.3□□□□□ -2.2
RB1P06400 MTCO2P33-201ENST00000402100 465 ntBASIC1.3□□□□□ -2.2
RB1P06400 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.3□□□□□ -2.2
RB1P06400 RPS29P1-201ENST00000465274 159 ntBASIC1.3□□□□□ -2.2
RB1P06400 SNORD111.1-201ENST00000516421 86 ntBASIC1.3□□□□□ -2.2
RB1P06400 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC1.3□□□□□ -2.2
RB1P06400 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.3□□□□□ -2.2
RB1P06400 MIR151B-201ENST00000584249 96 ntBASIC1.3□□□□□ -2.2
RB1P06400 AC007742.2-201ENST00000618226 398 ntBASIC1.3□□□□□ -2.2
RB1P06400 MIR15B-201ENST00000385045 98 ntBASIC1.29□□□□□ -2.2
RB1P06400 RPL39P39-201ENST00000455840 151 ntBASIC1.29□□□□□ -2.2
RB1P06400 AC091959.1-201ENST00000495857 238 ntBASIC1.29□□□□□ -2.2
RB1P06400 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.29□□□□□ -2.2
RB1P06400 RNU6-947P-201ENST00000516264 106 ntBASIC1.29□□□□□ -2.2
RB1P06400 MIR4295-201ENST00000585286 85 ntBASIC1.29□□□□□ -2.2
RB1P06400 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
RB1P06400 RNU6-1272P-201ENST00000362776 107 ntBASIC1.28□□□□□ -2.2
RB1P06400 SNORD114-27-201ENST00000363766 70 ntBASIC1.28□□□□□ -2.2
RB1P06400 SNORD14E-201ENST00000364009 85 ntBASIC1.28□□□□□ -2.2
RB1P06400 MIR516B2-201ENST00000385190 85 ntBASIC1.28□□□□□ -2.2
RB1P06400 MIR136-201ENST00000385207 82 ntBASIC1.28□□□□□ -2.2
RB1P06400 AC113618.1-201ENST00000416747 285 ntBASIC1.28□□□□□ -2.2
RB1P06400 AC087343.1-201ENST00000477341 475 ntBASIC1.28□□□□□ -2.2
RB1P06400 NDUFA4P2-201ENST00000489989 244 ntBASIC1.28□□□□□ -2.2
RB1P06400 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC1.28□□□□□ -2.2
RB1P06400 SNORA31.2-201ENST00000516019 134 ntBASIC1.28□□□□□ -2.2
RB1P06400 AC090142.3-201ENST00000519012 385 ntBASIC1.28□□□□□ -2.2
RB1P06400 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
RB1P06400 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.28□□□□□ -2.21
RB1P06400 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
RB1P06400 Y_RNA.84-201ENST00000363011 104 ntBASIC1.27□□□□□ -2.21
RB1P06400 RNU6-1054P-201ENST00000411293 104 ntBASIC1.27□□□□□ -2.21
RB1P06400 Y_RNA.637-201ENST00000459424 114 ntBASIC1.27□□□□□ -2.21
RB1P06400 RPL23AP91-201ENST00000569211 455 ntBASIC1.27□□□□□ -2.21
RB1P06400 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC1.27□□□□□ -2.21
RB1P06400 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.27□□□□□ -2.21
RB1P06400 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
RB1P06400 Y_RNA.16-201ENST00000362421 102 ntBASIC1.26□□□□□ -2.21
RB1P06400 RNU6-1205P-201ENST00000363625 106 ntBASIC1.26□□□□□ -2.21
RB1P06400 Y_RNA.326-201ENST00000365176 113 ntBASIC1.26□□□□□ -2.21
RB1P06400 RNU6-144P-201ENST00000383951 107 ntBASIC1.26□□□□□ -2.21
RB1P06400 RNU6-342P-201ENST00000384521 104 ntBASIC1.26□□□□□ -2.21
RB1P06400 MIR618-201ENST00000385287 98 ntBASIC1.26□□□□□ -2.21
RB1P06400 MIR802-201ENST00000390235 94 ntBASIC1.26□□□□□ -2.21
RB1P06400 MIR1278-201ENST00000408753 81 ntBASIC1.26□□□□□ -2.21
RB1P06400 MIR548J-201ENST00000408833 112 ntBASIC1.26□□□□□ -2.21
RB1P06400 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.26□□□□□ -2.21
RB1P06400 AC015922.2-201ENST00000435593 184 ntBASIC1.26□□□□□ -2.21
RB1P06400 AC245047.7-201ENST00000440265 293 ntBASIC1.26□□□□□ -2.21
RB1P06400 MTND5P22-201ENST00000458380 195 ntBASIC1.26□□□□□ -2.21
RB1P06400 AC048334.1-201ENST00000477975 159 ntBASIC1.26□□□□□ -2.21
RB1P06400 SNORA31.4-201ENST00000516049 129 ntBASIC1.26□□□□□ -2.21
RB1P06400 RNU6-113P-201ENST00000516653 101 ntBASIC1.26□□□□□ -2.21
RB1P06400 AC006504.6-201ENST00000590142 199 ntBASIC1.26□□□□□ -2.21
RB1P06400 AL022345.2-201ENST00000606307 135 ntBASIC1.26□□□□□ -2.21
RB1P06400 AC013791.1-201ENST00000616619 62 ntBASIC1.26□□□□□ -2.21
RB1P06400 PVT1_3.1-201ENST00000620853 95 ntBASIC1.26□□□□□ -2.21
RB1P06400 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.26□□□□□ -2.21
RB1P06400 MIR6767-201ENST00000637302 66 ntBASIC1.26□□□□□ -2.21
RB1P06400 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.26□□□□□ -2.21
RB1P06400 SNORA63-201ENST00000363450 132 ntBASIC1.25□□□□□ -2.21
RB1P06400 SNORA25-201ENST00000384384 134 ntBASIC1.25□□□□□ -2.21
RB1P06400 MIR598-201ENST00000384868 97 ntBASIC1.25□□□□□ -2.21
RB1P06400 RNU6-1203P-201ENST00000410703 110 ntBASIC1.25□□□□□ -2.21
RB1P06400 AL133373.1-201ENST00000497098 94 ntBASIC1.25□□□□□ -2.21
RB1P06400 RNU7-40P-201ENST00000516397 64 ntBASIC1.25□□□□□ -2.21
RB1P06400 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC1.25□□□□□ -2.21
RB1P06400 AC068338.1-201ENST00000565567 176 ntBASIC1.25□□□□□ -2.21
RB1P06400 AL096861.1-201ENST00000610899 123 ntBASIC1.25□□□□□ -2.21
RB1P06400 AC022140.2-201ENST00000623500 188 ntBASIC1.25□□□□□ -2.21
RB1P06400 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.25□□□□□ -2.21
RB1P06400 Y_RNA.217-201ENST00000364214 105 ntBASIC1.24□□□□□ -2.21
RB1P06400 RNU6-442P-201ENST00000383968 104 ntBASIC1.24□□□□□ -2.21
RB1P06400 RNU6-662P-201ENST00000384253 104 ntBASIC1.24□□□□□ -2.21
RB1P06400 RNU6-1109P-201ENST00000391187 107 ntBASIC1.24□□□□□ -2.21
RB1P06400 BTF3P11-201ENST00000426582 477 ntBASIC1.24□□□□□ -2.21
RB1P06400 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC1.24□□□□□ -2.21
RB1P06400 SNORD11-201ENST00000459124 84 ntBASIC1.24□□□□□ -2.21
RB1P06400 Y_RNA.641-201ENST00000459414 105 ntBASIC1.24□□□□□ -2.21
RB1P06400 SERF1AP1-201ENST00000514575 187 ntBASIC1.24□□□□□ -2.21
RB1P06400 RNU6-1007P-201ENST00000516586 107 ntBASIC1.24□□□□□ -2.21
RB1P06400 SNORA27.4-201ENST00000516650 95 ntBASIC1.24□□□□□ -2.21
RB1P06400 RNU6-570P-201ENST00000517051 105 ntBASIC1.24□□□□□ -2.21
RB1P06400 SNORA74.3-201ENST00000517108 154 ntBASIC1.24□□□□□ -2.21
RB1P06400 AL442663.2-201ENST00000554385 511 ntBASIC1.24□□□□□ -2.21
RB1P06400 AC008507.4-201ENST00000585464 127 ntBASIC1.24□□□□□ -2.21
RB1P06400 AL442644.1-201ENST00000454390 3105 ntBASIC1.24□□□□□ -2.21
RB1P06400 SNORD38C-201ENST00000384381 69 ntBASIC1.23□□□□□ -2.21
RB1P06400 RNU6-1160P-201ENST00000384546 104 ntBASIC1.23□□□□□ -2.21
RB1P06400 RNU6-713P-201ENST00000384761 107 ntBASIC1.23□□□□□ -2.21
RB1P06400 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
RB1P06400 RNU6-910P-201ENST00000390844 107 ntBASIC1.23□□□□□ -2.21
RB1P06400 RPS29P29-201ENST00000456396 171 ntBASIC1.23□□□□□ -2.21
RB1P06400 RNU6-1338P-201ENST00000516328 91 ntBASIC1.23□□□□□ -2.21
RB1P06400 SNORA18.7-201ENST00000516910 131 ntBASIC1.23□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 343.4 ms