Protein–RNA interactions for Protein: P03905

MT-ND4, NADH-ubiquinone oxidoreductase chain 4, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND4P03905 MIR18A-201ENST00000362310 71 ntBASIC0.26□□□□□ -2.37
MT-ND4P03905 RNU6-934P-201ENST00000365154 107 ntBASIC0.26□□□□□ -2.37
MT-ND4P03905 RNU2-13P-201ENST00000515909 113 ntBASIC0.26□□□□□ -2.37
MT-ND4P03905 RNU6-496P-201ENST00000516145 99 ntBASIC0.26□□□□□ -2.37
MT-ND4P03905 RNU6-977P-201ENST00000516411 103 ntBASIC0.26□□□□□ -2.37
MT-ND4P03905 RPL23AP91-201ENST00000569211 455 ntBASIC0.26□□□□□ -2.37
MT-ND4P03905 MIR4771-2-201ENST00000577758 74 ntBASIC0.26□□□□□ -2.37
MT-ND4P03905 MIR4771-1-201ENST00000582617 74 ntBASIC0.26□□□□□ -2.37
MT-ND4P03905 AC010205.1-201ENST00000616668 449 ntBASIC0.26□□□□□ -2.37
MT-ND4P03905 AC243829.3-201ENST00000622177 108 ntBASIC0.26□□□□□ -2.37
MT-ND4P03905 MTND4LP32-201ENST00000636111 270 ntBASIC0.26□□□□□ -2.37
MT-ND4P03905 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.26□□□□□ -2.37
MT-ND4P03905 RNU6-1048P-201ENST00000364054 107 ntBASIC0.25□□□□□ -2.37
MT-ND4P03905 Y_RNA.462-201ENST00000384268 102 ntBASIC0.25□□□□□ -2.37
MT-ND4P03905 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.25□□□□□ -2.37
MT-ND4P03905 RNU2-14P-201ENST00000411053 191 ntBASIC0.25□□□□□ -2.37
MT-ND4P03905 AC024067.1-201ENST00000426199 223 ntBASIC0.25□□□□□ -2.37
MT-ND4P03905 RNU6-437P-201ENST00000459408 95 ntBASIC0.25□□□□□ -2.37
MT-ND4P03905 RNA5SP134-201ENST00000516492 96 ntBASIC0.25□□□□□ -2.37
MT-ND4P03905 RNU6-1223P-201ENST00000517124 104 ntBASIC0.25□□□□□ -2.37
MT-ND4P03905 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.25□□□□□ -2.37
MT-ND4P03905 MIR3612-201ENST00000579753 87 ntBASIC0.25□□□□□ -2.37
MT-ND4P03905 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC0.25□□□□□ -2.37
MT-ND4P03905 AP000753.3-201ENST00000604083 169 ntBASIC0.25□□□□□ -2.37
MT-ND4P03905 AL080274.1-201ENST00000605565 220 ntBASIC0.25□□□□□ -2.37
MT-ND4P03905 LARP7P1-201ENST00000605576 316 ntBASIC0.25□□□□□ -2.37
MT-ND4P03905 AL162730.1-201ENST00000605734 292 ntBASIC0.25□□□□□ -2.37
MT-ND4P03905 AC243829.6-201ENST00000612652 106 ntBASIC0.25□□□□□ -2.37
MT-ND4P03905 AC006441.5-201ENST00000612680 209 ntBASIC0.25□□□□□ -2.37
MT-ND4P03905 AC133104.2-201ENST00000615272 193 ntBASIC0.25□□□□□ -2.37
MT-ND4P03905 MIR4272-201ENST00000635924 64 ntBASIC0.25□□□□□ -2.37
MT-ND4P03905 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.25□□□□□ -2.37
MT-ND4P03905 RNU4-50P-201ENST00000364361 141 ntBASIC0.24□□□□□ -2.37
MT-ND4P03905 RNU1-133P-201ENST00000364867 167 ntBASIC0.24□□□□□ -2.37
MT-ND4P03905 SNORA1.2-201ENST00000365189 134 ntBASIC0.24□□□□□ -2.37
MT-ND4P03905 SNORA36B-201ENST00000410438 131 ntBASIC0.24□□□□□ -2.37
MT-ND4P03905 RNU6-847P-201ENST00000411115 108 ntBASIC0.24□□□□□ -2.37
MT-ND4P03905 RNA5SP247-201ENST00000411181 105 ntBASIC0.24□□□□□ -2.37
MT-ND4P03905 AC090844.1-201ENST00000422019 156 ntBASIC0.24□□□□□ -2.37
MT-ND4P03905 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.24□□□□□ -2.37
MT-ND4P03905 SNORD11-201ENST00000459124 84 ntBASIC0.24□□□□□ -2.37
MT-ND4P03905 RNU7-141P-201ENST00000459304 62 ntBASIC0.24□□□□□ -2.37
MT-ND4P03905 AC010655.3-201ENST00000478818 450 ntBASIC0.24□□□□□ -2.37
MT-ND4P03905 RNU7-110P-201ENST00000516891 62 ntBASIC0.24□□□□□ -2.37
MT-ND4P03905 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC0.24□□□□□ -2.37
MT-ND4P03905 MIR2681-201ENST00000581814 105 ntBASIC0.24□□□□□ -2.37
MT-ND4P03905 AC011373.1-201ENST00000607270 237 ntBASIC0.24□□□□□ -2.37
MT-ND4P03905 AC092794.1-201ENST00000612734 582 ntBASIC0.24□□□□□ -2.37
MT-ND4P03905 RNU6-674P-201ENST00000363831 107 ntBASIC0.23□□□□□ -2.37
MT-ND4P03905 RNU6-1040P-201ENST00000383974 107 ntBASIC0.23□□□□□ -2.37
MT-ND4P03905 Y_RNA.458-201ENST00000384240 102 ntBASIC0.23□□□□□ -2.37
MT-ND4P03905 SNORD116-29-201ENST00000384516 83 ntBASIC0.23□□□□□ -2.37
MT-ND4P03905 RNU6-342P-201ENST00000384521 104 ntBASIC0.23□□□□□ -2.37
MT-ND4P03905 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.23□□□□□ -2.37
MT-ND4P03905 RNU4-30P-201ENST00000410245 143 ntBASIC0.23□□□□□ -2.37
MT-ND4P03905 SCARNA8-201ENST00000515924 131 ntBASIC0.23□□□□□ -2.37
MT-ND4P03905 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC0.23□□□□□ -2.37
MT-ND4P03905 MIR4711-201ENST00000578274 70 ntBASIC0.23□□□□□ -2.37
MT-ND4P03905 MIR4804-201ENST00000581683 73 ntBASIC0.23□□□□□ -2.37
MT-ND4P03905 MIR4264-201ENST00000583520 66 ntBASIC0.23□□□□□ -2.37
MT-ND4P03905 AC020891.4-201ENST00000605745 93 ntBASIC0.23□□□□□ -2.37
MT-ND4P03905 Y_RNA.772-201ENST00000606692 102 ntBASIC0.23□□□□□ -2.37
MT-ND4P03905 uc_338.4-201ENST00000616635 176 ntBASIC0.23□□□□□ -2.37
MT-ND4P03905 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.23□□□□□ -2.37
MT-ND4P03905 Y_RNA.248-201ENST00000364501 109 ntBASIC0.22□□□□□ -2.37
MT-ND4P03905 Y_RNA.259-201ENST00000364619 101 ntBASIC0.22□□□□□ -2.37
MT-ND4P03905 Y_RNA.463-201ENST00000384271 102 ntBASIC0.22□□□□□ -2.37
MT-ND4P03905 MIR936-201ENST00000401264 98 ntBASIC0.22□□□□□ -2.37
MT-ND4P03905 RNA5SP193-201ENST00000410353 107 ntBASIC0.22□□□□□ -2.37
MT-ND4P03905 MIR4676-201ENST00000583078 72 ntBASIC0.22□□□□□ -2.37
MT-ND4P03905 AC005357.1-201ENST00000588399 301 ntBASIC0.22□□□□□ -2.37
MT-ND4P03905 AC025253.1-201ENST00000613623 543 ntBASIC0.22□□□□□ -2.37
MT-ND4P03905 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.21□□□□□ -2.38
MT-ND4P03905 RNU6-801P-201ENST00000364087 105 ntBASIC0.21□□□□□ -2.38
MT-ND4P03905 VTRNA1-3-201ENST00000365645 89 ntBASIC0.21□□□□□ -2.38
MT-ND4P03905 Y_RNA.428-201ENST00000384078 102 ntBASIC0.21□□□□□ -2.38
MT-ND4P03905 RNU6-937P-201ENST00000384325 106 ntBASIC0.21□□□□□ -2.38
MT-ND4P03905 Y_RNA.494-201ENST00000384432 111 ntBASIC0.21□□□□□ -2.38
MT-ND4P03905 MIR216A-201ENST00000385063 110 ntBASIC0.21□□□□□ -2.38
MT-ND4P03905 RNY4P36-201ENST00000391116 96 ntBASIC0.21□□□□□ -2.38
MT-ND4P03905 BTF3P11-201ENST00000426582 477 ntBASIC0.21□□□□□ -2.38
MT-ND4P03905 RNU7-56P-201ENST00000458744 62 ntBASIC0.21□□□□□ -2.38
MT-ND4P03905 AC091959.1-201ENST00000495857 238 ntBASIC0.21□□□□□ -2.38
MT-ND4P03905 RNU7-25P-201ENST00000516544 62 ntBASIC0.21□□□□□ -2.38
MT-ND4P03905 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC0.21□□□□□ -2.38
MT-ND4P03905 MIR5093-201ENST00000583199 100 ntBASIC0.21□□□□□ -2.38
MT-ND4P03905 uc_338.6-201ENST00000613544 171 ntBASIC0.21□□□□□ -2.38
MT-ND4P03905 DLEU2_2.2-201ENST00000615474 90 ntBASIC0.21□□□□□ -2.38
MT-ND4P03905 Y_RNA.224-201ENST00000364308 111 ntBASIC0.2□□□□□ -2.38
MT-ND4P03905 RNU4-45P-201ENST00000365469 141 ntBASIC0.2□□□□□ -2.38
MT-ND4P03905 Y_RNA.387-201ENST00000383918 102 ntBASIC0.2□□□□□ -2.38
MT-ND4P03905 SNORA72.4-201ENST00000384174 132 ntBASIC0.2□□□□□ -2.38
MT-ND4P03905 Y_RNA.496-201ENST00000384444 101 ntBASIC0.2□□□□□ -2.38
MT-ND4P03905 Y_RNA.547-201ENST00000384654 119 ntBASIC0.2□□□□□ -2.38
MT-ND4P03905 Y_RNA.551-201ENST00000384661 102 ntBASIC0.2□□□□□ -2.38
MT-ND4P03905 SNORA26.5-201ENST00000391215 123 ntBASIC0.2□□□□□ -2.38
MT-ND4P03905 RNU6ATAC19P-201ENST00000408096 110 ntBASIC0.2□□□□□ -2.38
MT-ND4P03905 MTND1P14-201ENST00000427400 950 ntBASIC0.2□□□□□ -2.38
MT-ND4P03905 RNU7-62P-201ENST00000458856 62 ntBASIC0.2□□□□□ -2.38
MT-ND4P03905 RNU6-277P-201ENST00000516272 106 ntBASIC0.2□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 199.8 ms