Protein–RNA interactions for Protein: O96006

ZBED1, Zinc finger BED domain-containing protein 1, humanhuman

Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZBED1O96006 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.8□□□□□ -2.12
ZBED1O96006 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC1.8□□□□□ -2.12
ZBED1O96006 RNA5SP445-201ENST00000515889 115 ntBASIC1.8□□□□□ -2.12
ZBED1O96006 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.8□□□□□ -2.12
ZBED1O96006 AC015712.3-201ENST00000559380 164 ntBASIC1.8□□□□□ -2.12
ZBED1O96006 MIR4285-201ENST00000581001 85 ntBASIC1.8□□□□□ -2.12
ZBED1O96006 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.8□□□□□ -2.12
ZBED1O96006 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC1.8□□□□□ -2.12
ZBED1O96006 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
ZBED1O96006 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.79□□□□□ -2.12
ZBED1O96006 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
ZBED1O96006 SNORD48-201ENST00000364953 64 ntBASIC1.79□□□□□ -2.12
ZBED1O96006 RNU4-17P-201ENST00000365598 141 ntBASIC1.79□□□□□ -2.12
ZBED1O96006 Y_RNA.539-201ENST00000384635 107 ntBASIC1.79□□□□□ -2.12
ZBED1O96006 AL451046.2-201ENST00000403074 277 ntBASIC1.79□□□□□ -2.12
ZBED1O96006 MIR1298-201ENST00000408783 112 ntBASIC1.79□□□□□ -2.12
ZBED1O96006 AC027119.1-201ENST00000440877 241 ntBASIC1.79□□□□□ -2.12
ZBED1O96006 AC245517.4-201ENST00000448601 281 ntBASIC1.79□□□□□ -2.12
ZBED1O96006 AC092991.1-201ENST00000477176 376 ntBASIC1.79□□□□□ -2.12
ZBED1O96006 AC108210.2-201ENST00000503681 201 ntBASIC1.79□□□□□ -2.12
ZBED1O96006 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.79□□□□□ -2.12
ZBED1O96006 MIR4255-201ENST00000579351 72 ntBASIC1.79□□□□□ -2.12
ZBED1O96006 MIR3683-201ENST00000580847 82 ntBASIC1.79□□□□□ -2.12
ZBED1O96006 AC008507.4-201ENST00000585464 127 ntBASIC1.79□□□□□ -2.12
ZBED1O96006 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.79□□□□□ -2.12
ZBED1O96006 Y_RNA.229-201ENST00000364347 113 ntBASIC1.78□□□□□ -2.12
ZBED1O96006 SNORD38C-201ENST00000384381 69 ntBASIC1.78□□□□□ -2.12
ZBED1O96006 Y_RNA.587-201ENST00000391210 103 ntBASIC1.78□□□□□ -2.12
ZBED1O96006 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC1.78□□□□□ -2.12
ZBED1O96006 RNU6-111P-201ENST00000517179 105 ntBASIC1.78□□□□□ -2.12
ZBED1O96006 FAM106DP-201ENST00000586416 501 ntBASIC1.78□□□□□ -2.12
ZBED1O96006 MIR502-201ENST00000606349 86 ntBASIC1.78□□□□□ -2.12
ZBED1O96006 AL021707.8-201ENST00000609428 183 ntBASIC1.78□□□□□ -2.12
ZBED1O96006 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
ZBED1O96006 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
ZBED1O96006 Y_RNA.476-201ENST00000384347 108 ntBASIC1.77□□□□□ -2.13
ZBED1O96006 Y_RNA.572-201ENST00000384757 98 ntBASIC1.77□□□□□ -2.13
ZBED1O96006 SNORD58.1-201ENST00000391313 66 ntBASIC1.77□□□□□ -2.13
ZBED1O96006 RNU7-149P-201ENST00000516739 59 ntBASIC1.77□□□□□ -2.13
ZBED1O96006 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.77□□□□□ -2.13
ZBED1O96006 CBX3P4-201ENST00000538909 354 ntBASIC1.77□□□□□ -2.13
ZBED1O96006 AC090049.2-201ENST00000550377 109 ntBASIC1.77□□□□□ -2.13
ZBED1O96006 MIR4662B-201ENST00000579498 81 ntBASIC1.77□□□□□ -2.13
ZBED1O96006 MIR4524B-201ENST00000581569 115 ntBASIC1.77□□□□□ -2.13
ZBED1O96006 AL513534.2-201ENST00000603836 250 ntBASIC1.77□□□□□ -2.13
ZBED1O96006 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC1.77□□□□□ -2.13
ZBED1O96006 AL121890.5-201ENST00000620848 304 ntBASIC1.77□□□□□ -2.13
ZBED1O96006 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.77□□□□□ -2.13
ZBED1O96006 RNY4P28-201ENST00000365281 93 ntBASIC1.76□□□□□ -2.13
ZBED1O96006 MIR15B-201ENST00000385045 98 ntBASIC1.76□□□□□ -2.13
ZBED1O96006 MIR136-201ENST00000385207 82 ntBASIC1.76□□□□□ -2.13
ZBED1O96006 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.76□□□□□ -2.13
ZBED1O96006 AC015922.2-201ENST00000435593 184 ntBASIC1.76□□□□□ -2.13
ZBED1O96006 COX6CP14-201ENST00000469580 174 ntBASIC1.76□□□□□ -2.13
ZBED1O96006 RNU6-126P-201ENST00000516685 103 ntBASIC1.76□□□□□ -2.13
ZBED1O96006 RNU6-922P-201ENST00000516753 99 ntBASIC1.76□□□□□ -2.13
ZBED1O96006 Pinc.1-201ENST00000616452 154 ntBASIC1.76□□□□□ -2.13
ZBED1O96006 RNU6-653P-201ENST00000363074 106 ntBASIC1.75□□□□□ -2.13
ZBED1O96006 Y_RNA.308-201ENST00000365043 101 ntBASIC1.75□□□□□ -2.13
ZBED1O96006 RNA5SP190-201ENST00000365222 118 ntBASIC1.75□□□□□ -2.13
ZBED1O96006 MIR516B2-201ENST00000385190 85 ntBASIC1.75□□□□□ -2.13
ZBED1O96006 MT-TG-201ENST00000387429 68 ntBASIC1.75□□□□□ -2.13
ZBED1O96006 SNORD72-201ENST00000390994 80 ntBASIC1.75□□□□□ -2.13
ZBED1O96006 AC245047.8-201ENST00000456455 284 ntBASIC1.75□□□□□ -2.13
ZBED1O96006 RPL30P7-201ENST00000479312 323 ntBASIC1.75□□□□□ -2.13
ZBED1O96006 RN7SKP164-201ENST00000516138 266 ntBASIC1.75□□□□□ -2.13
ZBED1O96006 RNU6-917P-201ENST00000516294 104 ntBASIC1.75□□□□□ -2.13
ZBED1O96006 RNU6-902P-201ENST00000517212 91 ntBASIC1.75□□□□□ -2.13
ZBED1O96006 AP001485.1-201ENST00000604799 199 ntBASIC1.75□□□□□ -2.13
ZBED1O96006 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
ZBED1O96006 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
ZBED1O96006 Y_RNA.515-201ENST00000384535 112 ntBASIC1.74□□□□□ -2.13
ZBED1O96006 MIR526A1-201ENST00000384897 85 ntBASIC1.74□□□□□ -2.13
ZBED1O96006 MIR653-201ENST00000385279 96 ntBASIC1.74□□□□□ -2.13
ZBED1O96006 MIR616-201ENST00000385293 97 ntBASIC1.74□□□□□ -2.13
ZBED1O96006 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.74□□□□□ -2.13
ZBED1O96006 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.74□□□□□ -2.13
ZBED1O96006 Y_RNA.626-201ENST00000411288 95 ntBASIC1.74□□□□□ -2.13
ZBED1O96006 AL357312.1-201ENST00000603879 298 ntBASIC1.74□□□□□ -2.13
ZBED1O96006 AC011921.3-201ENST00000605540 361 ntBASIC1.74□□□□□ -2.13
ZBED1O96006 AL391903.3-201ENST00000612158 163 ntBASIC1.74□□□□□ -2.13
ZBED1O96006 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
ZBED1O96006 RNU1-17P-201ENST00000363022 152 ntBASIC1.73□□□□□ -2.13
ZBED1O96006 Y_RNA.199-201ENST00000364014 102 ntBASIC1.73□□□□□ -2.13
ZBED1O96006 RNU6-1138P-201ENST00000365359 106 ntBASIC1.73□□□□□ -2.13
ZBED1O96006 RNY3P5-201ENST00000384127 102 ntBASIC1.73□□□□□ -2.13
ZBED1O96006 SNORD77.4-201ENST00000516158 81 ntBASIC1.73□□□□□ -2.13
ZBED1O96006 AC090142.3-201ENST00000519012 385 ntBASIC1.73□□□□□ -2.13
ZBED1O96006 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.73□□□□□ -2.13
ZBED1O96006 RNU6-103P-201ENST00000363686 107 ntBASIC1.72□□□□□ -2.13
ZBED1O96006 Y_RNA.200-201ENST00000364018 102 ntBASIC1.72□□□□□ -2.13
ZBED1O96006 snoU2_19.4-201ENST00000364329 80 ntBASIC1.72□□□□□ -2.13
ZBED1O96006 RNU6-381P-201ENST00000391259 108 ntBASIC1.72□□□□□ -2.13
ZBED1O96006 RNU6-493P-201ENST00000391321 108 ntBASIC1.72□□□□□ -2.13
ZBED1O96006 RPS27P16-201ENST00000425758 201 ntBASIC1.72□□□□□ -2.13
ZBED1O96006 SNORD13-201ENST00000459299 104 ntBASIC1.72□□□□□ -2.13
ZBED1O96006 GHRLOS.1-201ENST00000610995 70 ntBASIC1.72□□□□□ -2.13
ZBED1O96006 AL353997.5-201ENST00000618886 171 ntBASIC1.72□□□□□ -2.13
ZBED1O96006 RNU6-268P-201ENST00000364174 107 ntBASIC1.71□□□□□ -2.14
ZBED1O96006 Y_RNA.552-201ENST00000384665 112 ntBASIC1.71□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 167.6 ms