Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 MIRLET7C-201ENST00000362160 84 ntBASIC1.42□□□□□ -2.18
CLPTM1O96005 MIR411-201ENST00000362239 96 ntBASIC1.42□□□□□ -2.18
CLPTM1O96005 Y_RNA.83-201ENST00000363005 113 ntBASIC1.42□□□□□ -2.18
CLPTM1O96005 RNU6-424P-201ENST00000384367 105 ntBASIC1.42□□□□□ -2.18
CLPTM1O96005 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
CLPTM1O96005 PGBD4P5-201ENST00000445958 426 ntBASIC1.42□□□□□ -2.18
CLPTM1O96005 AC005908.1-201ENST00000468701 347 ntBASIC1.42□□□□□ -2.18
CLPTM1O96005 NDUFA4P2-201ENST00000489989 244 ntBASIC1.42□□□□□ -2.18
CLPTM1O96005 RNU6-138P-201ENST00000515952 107 ntBASIC1.42□□□□□ -2.18
CLPTM1O96005 RNA5SP168-201ENST00000516642 112 ntBASIC1.42□□□□□ -2.18
CLPTM1O96005 RNU6-453P-201ENST00000516819 85 ntBASIC1.42□□□□□ -2.18
CLPTM1O96005 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.42□□□□□ -2.18
CLPTM1O96005 AL160236.1-201ENST00000556317 195 ntBASIC1.42□□□□□ -2.18
CLPTM1O96005 MIR4778-201ENST00000577635 80 ntBASIC1.42□□□□□ -2.18
CLPTM1O96005 MIR4308-201ENST00000580634 81 ntBASIC1.42□□□□□ -2.18
CLPTM1O96005 MIR4422-201ENST00000581938 83 ntBASIC1.42□□□□□ -2.18
CLPTM1O96005 AL049861.1-201ENST00000603130 150 ntBASIC1.42□□□□□ -2.18
CLPTM1O96005 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
CLPTM1O96005 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
CLPTM1O96005 RNU6-661P-201ENST00000362409 107 ntBASIC1.41□□□□□ -2.18
CLPTM1O96005 U8.5-201ENST00000364528 136 ntBASIC1.41□□□□□ -2.18
CLPTM1O96005 MT-TT-201ENST00000387460 66 ntBASIC1.41□□□□□ -2.18
CLPTM1O96005 RNU6-131P-201ENST00000391144 107 ntBASIC1.41□□□□□ -2.18
CLPTM1O96005 RNU6-381P-201ENST00000391259 108 ntBASIC1.41□□□□□ -2.18
CLPTM1O96005 JTBP1-201ENST00000441314 247 ntBASIC1.41□□□□□ -2.18
CLPTM1O96005 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC1.41□□□□□ -2.18
CLPTM1O96005 SCARNA8-201ENST00000515924 131 ntBASIC1.41□□□□□ -2.18
CLPTM1O96005 RNU6-1007P-201ENST00000516586 107 ntBASIC1.41□□□□□ -2.18
CLPTM1O96005 AL021707.8-201ENST00000609428 183 ntBASIC1.41□□□□□ -2.18
CLPTM1O96005 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.4□□□□□ -2.19
CLPTM1O96005 Y_RNA.297-201ENST00000364950 91 ntBASIC1.4□□□□□ -2.19
CLPTM1O96005 RNU6-47P-201ENST00000383866 107 ntBASIC1.4□□□□□ -2.19
CLPTM1O96005 MIR1267-201ENST00000408723 78 ntBASIC1.4□□□□□ -2.19
CLPTM1O96005 AC093850.1-201ENST00000454121 251 ntBASIC1.4□□□□□ -2.19
CLPTM1O96005 COX6CP14-201ENST00000469580 174 ntBASIC1.4□□□□□ -2.19
CLPTM1O96005 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC1.4□□□□□ -2.19
CLPTM1O96005 AC114811.1-201ENST00000507207 168 ntBASIC1.4□□□□□ -2.19
CLPTM1O96005 RNA5SP458-201ENST00000516188 119 ntBASIC1.4□□□□□ -2.19
CLPTM1O96005 RNA5SP61-201ENST00000516453 100 ntBASIC1.4□□□□□ -2.19
CLPTM1O96005 MIR2681-201ENST00000581814 105 ntBASIC1.4□□□□□ -2.19
CLPTM1O96005 MIR4762-201ENST00000585261 75 ntBASIC1.4□□□□□ -2.19
CLPTM1O96005 AC120024.3-201ENST00000603167 156 ntBASIC1.4□□□□□ -2.19
CLPTM1O96005 MIR8074-201ENST00000615081 81 ntBASIC1.4□□□□□ -2.19
CLPTM1O96005 SNORD3E-202ENST00000627253 216 ntBASIC1.4□□□□□ -2.19
CLPTM1O96005 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.39□□□□□ -2.19
CLPTM1O96005 SNORD50B-201ENST00000364995 70 ntBASIC1.39□□□□□ -2.19
CLPTM1O96005 RNU6-163P-201ENST00000384396 106 ntBASIC1.39□□□□□ -2.19
CLPTM1O96005 MIR194-1-201ENST00000384892 85 ntBASIC1.39□□□□□ -2.19
CLPTM1O96005 MIR660-201ENST00000385235 97 ntBASIC1.39□□□□□ -2.19
CLPTM1O96005 SNORD72-201ENST00000390994 80 ntBASIC1.39□□□□□ -2.19
CLPTM1O96005 Y_RNA.587-201ENST00000391210 103 ntBASIC1.39□□□□□ -2.19
CLPTM1O96005 MIR1304-201ENST00000408243 91 ntBASIC1.39□□□□□ -2.19
CLPTM1O96005 AL161935.2-201ENST00000414627 60 ntBASIC1.39□□□□□ -2.19
CLPTM1O96005 RPL30P13-201ENST00000418873 348 ntBASIC1.39□□□□□ -2.19
CLPTM1O96005 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.39□□□□□ -2.19
CLPTM1O96005 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC1.39□□□□□ -2.19
CLPTM1O96005 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.39□□□□□ -2.19
CLPTM1O96005 RNU7-12P-201ENST00000516030 62 ntBASIC1.39□□□□□ -2.19
CLPTM1O96005 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
CLPTM1O96005 RNU2-4P-201ENST00000606190 192 ntBASIC1.39□□□□□ -2.19
CLPTM1O96005 AL513423.1-201ENST00000621695 132 ntBASIC1.39□□□□□ -2.19
CLPTM1O96005 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
CLPTM1O96005 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.39□□□□□ -2.19
CLPTM1O96005 ICE2P2-201ENST00000483823 2787 ntBASIC1.39□□□□□ -2.19
CLPTM1O96005 RNU6-1084P-201ENST00000362498 107 ntBASIC1.38□□□□□ -2.19
CLPTM1O96005 RNU6-200P-201ENST00000364743 107 ntBASIC1.38□□□□□ -2.19
CLPTM1O96005 MIR150-201ENST00000385048 84 ntBASIC1.38□□□□□ -2.19
CLPTM1O96005 SNORA17.3-201ENST00000391159 129 ntBASIC1.38□□□□□ -2.19
CLPTM1O96005 RNA5SP496-201ENST00000391240 109 ntBASIC1.38□□□□□ -2.19
CLPTM1O96005 RNU6-847P-201ENST00000411115 108 ntBASIC1.38□□□□□ -2.19
CLPTM1O96005 FTH1P12-201ENST00000432137 551 ntBASIC1.38□□□□□ -2.19
CLPTM1O96005 CYCTP-201ENST00000504253 315 ntBASIC1.38□□□□□ -2.19
CLPTM1O96005 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC1.38□□□□□ -2.19
CLPTM1O96005 SUMO2P16-201ENST00000519475 264 ntBASIC1.38□□□□□ -2.19
CLPTM1O96005 AC022559.1-201ENST00000520905 205 ntBASIC1.38□□□□□ -2.19
CLPTM1O96005 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.38□□□□□ -2.19
CLPTM1O96005 MIR4255-201ENST00000579351 72 ntBASIC1.38□□□□□ -2.19
CLPTM1O96005 AP001485.1-201ENST00000604799 199 ntBASIC1.38□□□□□ -2.19
CLPTM1O96005 AC106754.2-201ENST00000623006 233 ntBASIC1.38□□□□□ -2.19
CLPTM1O96005 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
CLPTM1O96005 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.38□□□□□ -2.19
CLPTM1O96005 Y_RNA.140-201ENST00000363474 103 ntBASIC1.37□□□□□ -2.19
CLPTM1O96005 snoU2-30.1-201ENST00000365012 70 ntBASIC1.37□□□□□ -2.19
CLPTM1O96005 SNORD26-201ENST00000384147 75 ntBASIC1.37□□□□□ -2.19
CLPTM1O96005 AC004965.1-201ENST00000413033 213 ntBASIC1.37□□□□□ -2.19
CLPTM1O96005 MTND5P15-201ENST00000434246 349 ntBASIC1.37□□□□□ -2.19
CLPTM1O96005 RN7SKP164-201ENST00000516138 266 ntBASIC1.37□□□□□ -2.19
CLPTM1O96005 Y_RNA.676-201ENST00000516393 96 ntBASIC1.37□□□□□ -2.19
CLPTM1O96005 SNORD45.4-201ENST00000516629 73 ntBASIC1.37□□□□□ -2.19
CLPTM1O96005 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.37□□□□□ -2.19
CLPTM1O96005 SNORA77B-201ENST00000578179 125 ntBASIC1.37□□□□□ -2.19
CLPTM1O96005 AC008507.4-201ENST00000585464 127 ntBASIC1.37□□□□□ -2.19
CLPTM1O96005 uc_338.4-201ENST00000616635 176 ntBASIC1.37□□□□□ -2.19
CLPTM1O96005 MIR8063-201ENST00000621930 81 ntBASIC1.37□□□□□ -2.19
CLPTM1O96005 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
CLPTM1O96005 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.36□□□□□ -2.19
CLPTM1O96005 RNU6-1020P-201ENST00000363684 107 ntBASIC1.36□□□□□ -2.19
CLPTM1O96005 RNU6-457P-201ENST00000363999 107 ntBASIC1.36□□□□□ -2.19
CLPTM1O96005 RNA5SP259-201ENST00000365541 109 ntBASIC1.36□□□□□ -2.19
CLPTM1O96005 Y_RNA.571-201ENST00000384753 98 ntBASIC1.36□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 112 ms