Protein–RNA interactions for Protein: O95832

CLDN1, Claudin-1, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1O95832 AC021506.2-201ENST00000612354 169 ntBASIC1.4□□□□□ -2.19
CLDN1O95832 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.4□□□□□ -2.19
CLDN1O95832 Y_RNA.54-201ENST00000362766 105 ntBASIC1.39□□□□□ -2.19
CLDN1O95832 RNU6-653P-201ENST00000363074 106 ntBASIC1.39□□□□□ -2.19
CLDN1O95832 RNU6-379P-201ENST00000363813 104 ntBASIC1.39□□□□□ -2.19
CLDN1O95832 SNORA20.1-201ENST00000364790 130 ntBASIC1.39□□□□□ -2.19
CLDN1O95832 RNY4P28-201ENST00000365281 93 ntBASIC1.39□□□□□ -2.19
CLDN1O95832 Y_RNA.374-201ENST00000365606 101 ntBASIC1.39□□□□□ -2.19
CLDN1O95832 RNU6-439P-201ENST00000384188 106 ntBASIC1.39□□□□□ -2.19
CLDN1O95832 AL034345.1-201ENST00000407768 123 ntBASIC1.39□□□□□ -2.19
CLDN1O95832 RN7SKP101-201ENST00000411376 320 ntBASIC1.39□□□□□ -2.19
CLDN1O95832 COX6CP10-201ENST00000416832 224 ntBASIC1.39□□□□□ -2.19
CLDN1O95832 Z98949.2-201ENST00000440996 144 ntBASIC1.39□□□□□ -2.19
CLDN1O95832 JTBP1-201ENST00000441314 247 ntBASIC1.39□□□□□ -2.19
CLDN1O95832 STAG3L5P-204ENST00000443759 179 ntBASIC1.39□□□□□ -2.19
CLDN1O95832 AC233266.1-201ENST00000454518 96 ntBASIC1.39□□□□□ -2.19
CLDN1O95832 AC008834.1-201ENST00000511612 175 ntBASIC1.39□□□□□ -2.19
CLDN1O95832 SNORD116-28-201ENST00000516123 91 ntBASIC1.39□□□□□ -2.19
CLDN1O95832 RNU6-1271P-201ENST00000517049 105 ntBASIC1.39□□□□□ -2.19
CLDN1O95832 RNU6-111P-201ENST00000517179 105 ntBASIC1.39□□□□□ -2.19
CLDN1O95832 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.39□□□□□ -2.19
CLDN1O95832 AC006006.1-201ENST00000603082 144 ntBASIC1.39□□□□□ -2.19
CLDN1O95832 AC242852.1-201ENST00000612151 96 ntBASIC1.39□□□□□ -2.19
CLDN1O95832 AL591926.4-201ENST00000616895 298 ntBASIC1.39□□□□□ -2.19
CLDN1O95832 AL353770.2-201ENST00000620024 78 ntBASIC1.39□□□□□ -2.19
CLDN1O95832 AL513423.1-201ENST00000621695 132 ntBASIC1.39□□□□□ -2.19
CLDN1O95832 AC244015.1-201ENST00000622301 99 ntBASIC1.39□□□□□ -2.19
CLDN1O95832 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
CLDN1O95832 MIR126-201ENST00000362291 85 ntBASIC1.38□□□□□ -2.19
CLDN1O95832 Y_RNA.36-201ENST00000362602 112 ntBASIC1.38□□□□□ -2.19
CLDN1O95832 Y_RNA.292-201ENST00000364904 97 ntBASIC1.38□□□□□ -2.19
CLDN1O95832 RNU6-338P-201ENST00000383888 105 ntBASIC1.38□□□□□ -2.19
CLDN1O95832 RNU6-424P-201ENST00000384367 105 ntBASIC1.38□□□□□ -2.19
CLDN1O95832 RNU6-342P-201ENST00000384521 104 ntBASIC1.38□□□□□ -2.19
CLDN1O95832 MIR1323-201ENST00000408090 73 ntBASIC1.38□□□□□ -2.19
CLDN1O95832 MIR1278-201ENST00000408753 81 ntBASIC1.38□□□□□ -2.19
CLDN1O95832 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC1.38□□□□□ -2.19
CLDN1O95832 SNORD11-201ENST00000459124 84 ntBASIC1.38□□□□□ -2.19
CLDN1O95832 RNU7-34P-201ENST00000459394 64 ntBASIC1.38□□□□□ -2.19
CLDN1O95832 SNORA77B-201ENST00000578179 125 ntBASIC1.38□□□□□ -2.19
CLDN1O95832 AC009779.6-201ENST00000603972 165 ntBASIC1.38□□□□□ -2.19
CLDN1O95832 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC1.38□□□□□ -2.19
CLDN1O95832 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
CLDN1O95832 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
CLDN1O95832 RNU6-1123P-201ENST00000362347 106 ntBASIC1.37□□□□□ -2.19
CLDN1O95832 MIR522-201ENST00000385071 87 ntBASIC1.37□□□□□ -2.19
CLDN1O95832 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC1.37□□□□□ -2.19
CLDN1O95832 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC1.37□□□□□ -2.19
CLDN1O95832 Y_RNA.679-201ENST00000516416 91 ntBASIC1.37□□□□□ -2.19
CLDN1O95832 MIR2681-201ENST00000581814 105 ntBASIC1.37□□□□□ -2.19
CLDN1O95832 AC087685.1-201ENST00000587507 141 ntBASIC1.37□□□□□ -2.19
CLDN1O95832 Y_RNA.802-201ENST00000614892 130 ntBASIC1.37□□□□□ -2.19
CLDN1O95832 AL365265.1-201ENST00000621045 234 ntBASIC1.37□□□□□ -2.19
CLDN1O95832 AC245060.5-201ENST00000610778 3293 ntBASIC1.36□□□□□ -2.19
CLDN1O95832 MIR424-201ENST00000362227 98 ntBASIC1.36□□□□□ -2.19
CLDN1O95832 Y_RNA.265-201ENST00000364677 108 ntBASIC1.36□□□□□ -2.19
CLDN1O95832 RNU6-203P-201ENST00000384038 104 ntBASIC1.36□□□□□ -2.19
CLDN1O95832 MIR626-201ENST00000385032 94 ntBASIC1.36□□□□□ -2.19
CLDN1O95832 MIR934-201ENST00000401241 83 ntBASIC1.36□□□□□ -2.19
CLDN1O95832 RPL30P13-201ENST00000418873 348 ntBASIC1.36□□□□□ -2.19
CLDN1O95832 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.36□□□□□ -2.19
CLDN1O95832 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.36□□□□□ -2.19
CLDN1O95832 SNORA31.24-201ENST00000517232 57 ntBASIC1.36□□□□□ -2.19
CLDN1O95832 MIR3198-2-201ENST00000577868 80 ntBASIC1.36□□□□□ -2.19
CLDN1O95832 MIR4724-201ENST00000579485 89 ntBASIC1.36□□□□□ -2.19
CLDN1O95832 AC141273.2-201ENST00000618989 130 ntBASIC1.36□□□□□ -2.19
CLDN1O95832 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.35□□□□□ -2.19
CLDN1O95832 MIR302D-201ENST00000362275 68 ntBASIC1.35□□□□□ -2.19
CLDN1O95832 MIR367-201ENST00000362299 68 ntBASIC1.35□□□□□ -2.19
CLDN1O95832 RNU6-1209P-201ENST00000363655 107 ntBASIC1.35□□□□□ -2.19
CLDN1O95832 RNU6-414P-201ENST00000363705 104 ntBASIC1.35□□□□□ -2.19
CLDN1O95832 Y_RNA.476-201ENST00000384347 108 ntBASIC1.35□□□□□ -2.19
CLDN1O95832 SNORA8.3-201ENST00000384679 139 ntBASIC1.35□□□□□ -2.19
CLDN1O95832 MIR517C-201ENST00000385103 95 ntBASIC1.35□□□□□ -2.19
CLDN1O95832 MIR660-201ENST00000385235 97 ntBASIC1.35□□□□□ -2.19
CLDN1O95832 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.35□□□□□ -2.19
CLDN1O95832 RNA5SP496-201ENST00000391240 109 ntBASIC1.35□□□□□ -2.19
CLDN1O95832 RNU6ATAC23P-201ENST00000408448 123 ntBASIC1.35□□□□□ -2.19
CLDN1O95832 Y_RNA.626-201ENST00000411288 95 ntBASIC1.35□□□□□ -2.19
CLDN1O95832 SNRPGP10-201ENST00000432323 225 ntBASIC1.35□□□□□ -2.19
CLDN1O95832 PGBD4P5-201ENST00000445958 426 ntBASIC1.35□□□□□ -2.19
CLDN1O95832 NDUFA4P2-201ENST00000489989 244 ntBASIC1.35□□□□□ -2.19
CLDN1O95832 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.35□□□□□ -2.19
CLDN1O95832 AC015688.6-201ENST00000577737 104 ntBASIC1.35□□□□□ -2.19
CLDN1O95832 MIR8074-201ENST00000615081 81 ntBASIC1.35□□□□□ -2.19
CLDN1O95832 AC027279.3-201ENST00000625055 122 ntBASIC1.35□□□□□ -2.19
CLDN1O95832 AC095038.3-201ENST00000634439 195 ntBASIC1.35□□□□□ -2.19
CLDN1O95832 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.35□□□□□ -2.19
CLDN1O95832 Y_RNA.65-201ENST00000362846 100 ntBASIC1.34□□□□□ -2.19
CLDN1O95832 Y_RNA.205-201ENST00000364128 113 ntBASIC1.34□□□□□ -2.19
CLDN1O95832 Y_RNA.262-201ENST00000364641 102 ntBASIC1.34□□□□□ -2.19
CLDN1O95832 RNU1-93P-201ENST00000364704 169 ntBASIC1.34□□□□□ -2.19
CLDN1O95832 Y_RNA.293-201ENST00000364908 93 ntBASIC1.34□□□□□ -2.19
CLDN1O95832 MIR598-201ENST00000384868 97 ntBASIC1.34□□□□□ -2.19
CLDN1O95832 MIR30A-201ENST00000385092 71 ntBASIC1.34□□□□□ -2.19
CLDN1O95832 RNU6-381P-201ENST00000391259 108 ntBASIC1.34□□□□□ -2.19
CLDN1O95832 U8.16-201ENST00000391279 133 ntBASIC1.34□□□□□ -2.19
CLDN1O95832 RNU6-383P-201ENST00000410864 94 ntBASIC1.34□□□□□ -2.19
CLDN1O95832 Y_RNA.621-201ENST00000411065 96 ntBASIC1.34□□□□□ -2.19
CLDN1O95832 POLR2J4-204ENST00000418424 324 ntBASIC1.34□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 129.4 ms