Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 RNU6-23P-201ENST00000363283 107 ntBASIC2.4□□□□□ -2.03
CNOT4O95628 MIR522-201ENST00000385071 87 ntBASIC2.4□□□□□ -2.03
CNOT4O95628 RNA5SP210-201ENST00000391034 120 ntBASIC2.4□□□□□ -2.03
CNOT4O95628 RNA5SP465-201ENST00000391195 109 ntBASIC2.4□□□□□ -2.03
CNOT4O95628 AL117342.1-201ENST00000404861 406 ntBASIC2.4□□□□□ -2.03
CNOT4O95628 BX510359.4-201ENST00000423750 193 ntBASIC2.4□□□□□ -2.03
CNOT4O95628 RPS29P6-201ENST00000438196 145 ntBASIC2.4□□□□□ -2.03
CNOT4O95628 AL049830.1-201ENST00000468034 425 ntBASIC2.4□□□□□ -2.03
CNOT4O95628 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC2.4□□□□□ -2.03
CNOT4O95628 RNU6-113P-201ENST00000516653 101 ntBASIC2.4□□□□□ -2.03
CNOT4O95628 RNU6-1149P-201ENST00000516810 97 ntBASIC2.4□□□□□ -2.03
CNOT4O95628 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
CNOT4O95628 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
CNOT4O95628 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
CNOT4O95628 SNORA70B-201ENST00000384210 135 ntBASIC2.39□□□□□ -2.03
CNOT4O95628 MIR17-201ENST00000385012 84 ntBASIC2.39□□□□□ -2.03
CNOT4O95628 MIR802-201ENST00000390235 94 ntBASIC2.39□□□□□ -2.03
CNOT4O95628 SNORD77.3-201ENST00000391113 65 ntBASIC2.39□□□□□ -2.03
CNOT4O95628 AL590004.2-201ENST00000404787 371 ntBASIC2.39□□□□□ -2.03
CNOT4O95628 MIR1263-201ENST00000408324 86 ntBASIC2.39□□□□□ -2.03
CNOT4O95628 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.39□□□□□ -2.03
CNOT4O95628 FTH1P12-201ENST00000432137 551 ntBASIC2.39□□□□□ -2.03
CNOT4O95628 AL513328.1-201ENST00000446460 224 ntBASIC2.39□□□□□ -2.03
CNOT4O95628 RNA5SP282-201ENST00000516355 108 ntBASIC2.39□□□□□ -2.03
CNOT4O95628 AC024995.1-201ENST00000523014 93 ntBASIC2.39□□□□□ -2.03
CNOT4O95628 MIR6840-201ENST00000611937 71 ntBASIC2.39□□□□□ -2.03
CNOT4O95628 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
CNOT4O95628 AC008555.8-201ENST00000623602 2168 ntBASIC2.39□□□□□ -2.03
CNOT4O95628 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
CNOT4O95628 SNORA16B-201ENST00000364674 135 ntBASIC2.38□□□□□ -2.03
CNOT4O95628 MIR518F-201ENST00000384973 87 ntBASIC2.38□□□□□ -2.03
CNOT4O95628 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.38□□□□□ -2.03
CNOT4O95628 CST2P1-201ENST00000425770 87 ntBASIC2.38□□□□□ -2.03
CNOT4O95628 AC008413.1-201ENST00000511864 177 ntBASIC2.38□□□□□ -2.03
CNOT4O95628 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.38□□□□□ -2.03
CNOT4O95628 SCARNA15-202ENST00000516881 127 ntBASIC2.38□□□□□ -2.03
CNOT4O95628 MIR3670-2-201ENST00000582974 65 ntBASIC2.38□□□□□ -2.03
CNOT4O95628 MIR3670-1-201ENST00000584160 65 ntBASIC2.38□□□□□ -2.03
CNOT4O95628 MIR3670-3-201ENST00000584855 65 ntBASIC2.38□□□□□ -2.03
CNOT4O95628 MIR3670-4-201ENST00000612260 65 ntBASIC2.38□□□□□ -2.03
CNOT4O95628 AL590808.1-201ENST00000618696 141 ntBASIC2.38□□□□□ -2.03
CNOT4O95628 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
CNOT4O95628 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.38□□□□□ -2.03
CNOT4O95628 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.38□□□□□ -2.03
CNOT4O95628 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
CNOT4O95628 AL596028.1-201ENST00000326971 197 ntBASIC2.37□□□□□ -2.03
CNOT4O95628 RNU1-112P-201ENST00000364401 164 ntBASIC2.37□□□□□ -2.03
CNOT4O95628 Y_RNA.309-201ENST00000365046 111 ntBASIC2.37□□□□□ -2.03
CNOT4O95628 UBL5P3-201ENST00000475112 231 ntBASIC2.37□□□□□ -2.03
CNOT4O95628 AL163195.1-201ENST00000496941 348 ntBASIC2.37□□□□□ -2.03
CNOT4O95628 MIR5197-201ENST00000583721 112 ntBASIC2.37□□□□□ -2.03
CNOT4O95628 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC2.37□□□□□ -2.03
CNOT4O95628 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
CNOT4O95628 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2.37□□□□□ -2.03
CNOT4O95628 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
CNOT4O95628 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
CNOT4O95628 RNA5SP276-201ENST00000362580 94 ntBASIC2.36□□□□□ -2.03
CNOT4O95628 SNORD68-201ENST00000363214 84 ntBASIC2.36□□□□□ -2.03
CNOT4O95628 RNU6-442P-201ENST00000383968 104 ntBASIC2.36□□□□□ -2.03
CNOT4O95628 Y_RNA.528-201ENST00000384575 108 ntBASIC2.36□□□□□ -2.03
CNOT4O95628 RNA5SP89-201ENST00000410300 108 ntBASIC2.36□□□□□ -2.03
CNOT4O95628 RNA5SP450-201ENST00000411206 102 ntBASIC2.36□□□□□ -2.03
CNOT4O95628 CALM2P4-201ENST00000430810 426 ntBASIC2.36□□□□□ -2.03
CNOT4O95628 HMGN2P3-201ENST00000433603 273 ntBASIC2.36□□□□□ -2.03
CNOT4O95628 HMGN2P5-201ENST00000436882 273 ntBASIC2.36□□□□□ -2.03
CNOT4O95628 RN7SL297P-201ENST00000483161 293 ntBASIC2.36□□□□□ -2.03
CNOT4O95628 RNU6-168P-201ENST00000516189 101 ntBASIC2.36□□□□□ -2.03
CNOT4O95628 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.36□□□□□ -2.03
CNOT4O95628 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
CNOT4O95628 RNU6-862P-201ENST00000362804 105 ntBASIC2.35□□□□□ -2.03
CNOT4O95628 RNA5SP68-201ENST00000363885 119 ntBASIC2.35□□□□□ -2.03
CNOT4O95628 SNORD14E-201ENST00000364009 85 ntBASIC2.35□□□□□ -2.03
CNOT4O95628 MIR597-201ENST00000384968 97 ntBASIC2.35□□□□□ -2.03
CNOT4O95628 MIR548O-201ENST00000408583 114 ntBASIC2.35□□□□□ -2.03
CNOT4O95628 RNA5SP136-201ENST00000410906 107 ntBASIC2.35□□□□□ -2.03
CNOT4O95628 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.35□□□□□ -2.03
CNOT4O95628 RNU6-412P-201ENST00000516434 106 ntBASIC2.35□□□□□ -2.03
CNOT4O95628 MIR4762-201ENST00000585261 75 ntBASIC2.35□□□□□ -2.03
CNOT4O95628 AC006441.5-201ENST00000612680 209 ntBASIC2.35□□□□□ -2.03
CNOT4O95628 MIR6817-201ENST00000615588 66 ntBASIC2.35□□□□□ -2.03
CNOT4O95628 AL137067.1-201ENST00000615933 120 ntBASIC2.35□□□□□ -2.03
CNOT4O95628 AC134878.1-201ENST00000619901 243 ntBASIC2.35□□□□□ -2.03
CNOT4O95628 CTSLP2-204ENST00000629029 392 ntBASIC2.35□□□□□ -2.03
CNOT4O95628 MIR376A2-201ENST00000636782 80 ntBASIC2.35□□□□□ -2.03
CNOT4O95628 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
CNOT4O95628 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.34□□□□□ -2.03
CNOT4O95628 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
CNOT4O95628 RNU6-1255P-201ENST00000363434 112 ntBASIC2.34□□□□□ -2.03
CNOT4O95628 RNA5SP493-201ENST00000364115 91 ntBASIC2.34□□□□□ -2.03
CNOT4O95628 U8.5-201ENST00000364528 136 ntBASIC2.34□□□□□ -2.03
CNOT4O95628 RNU1-51P-201ENST00000365345 176 ntBASIC2.34□□□□□ -2.03
CNOT4O95628 Y_RNA.366-201ENST00000365540 102 ntBASIC2.34□□□□□ -2.03
CNOT4O95628 Y_RNA.410-201ENST00000383992 113 ntBASIC2.34□□□□□ -2.03
CNOT4O95628 RPS27P21-201ENST00000486977 252 ntBASIC2.34□□□□□ -2.03
CNOT4O95628 RNU6-237P-201ENST00000515985 71 ntBASIC2.34□□□□□ -2.03
CNOT4O95628 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.34□□□□□ -2.03
CNOT4O95628 U1.36-201ENST00000620684 176 ntBASIC2.34□□□□□ -2.03
CNOT4O95628 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.34□□□□□ -2.04
CNOT4O95628 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.04
CNOT4O95628 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.33□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 159.8 ms