Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 snoU13.25-201ENST00000458945 104 ntBASIC1.19□□□□□ -2.22
MBD4O95243 RPS26P48-201ENST00000491713 339 ntBASIC1.19□□□□□ -2.22
MBD4O95243 UBL5P1-201ENST00000507979 193 ntBASIC1.19□□□□□ -2.22
MBD4O95243 RPL23AP91-201ENST00000569211 455 ntBASIC1.19□□□□□ -2.22
MBD4O95243 AL355297.3-201ENST00000604082 446 ntBASIC1.19□□□□□ -2.22
MBD4O95243 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
MBD4O95243 RNU6-797P-201ENST00000363101 109 ntBASIC1.18□□□□□ -2.22
MBD4O95243 Y_RNA.138-201ENST00000363462 102 ntBASIC1.18□□□□□ -2.22
MBD4O95243 Y_RNA.276-201ENST00000364732 109 ntBASIC1.18□□□□□ -2.22
MBD4O95243 SNORD114-24-201ENST00000365029 72 ntBASIC1.18□□□□□ -2.22
MBD4O95243 RNU6-290P-201ENST00000365212 101 ntBASIC1.18□□□□□ -2.22
MBD4O95243 RNU6-144P-201ENST00000383951 107 ntBASIC1.18□□□□□ -2.22
MBD4O95243 Y_RNA.455-201ENST00000384230 98 ntBASIC1.18□□□□□ -2.22
MBD4O95243 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
MBD4O95243 NDUFA4P2-201ENST00000489989 244 ntBASIC1.18□□□□□ -2.22
MBD4O95243 RNU6-764P-201ENST00000516396 105 ntBASIC1.18□□□□□ -2.22
MBD4O95243 AC008507.4-201ENST00000585464 127 ntBASIC1.18□□□□□ -2.22
MBD4O95243 AC136443.5-201ENST00000603741 370 ntBASIC1.18□□□□□ -2.22
MBD4O95243 AC037487.3-201ENST00000606668 112 ntBASIC1.18□□□□□ -2.22
MBD4O95243 AC008163.1-202ENST00000636004 2889 ntBASIC1.18□□□□□ -2.22
MBD4O95243 MIR103A2-201ENST00000362154 78 ntBASIC1.17□□□□□ -2.22
MBD4O95243 Y_RNA.152-201ENST00000363578 100 ntBASIC1.17□□□□□ -2.22
MBD4O95243 SNORA75.2-201ENST00000391138 150 ntBASIC1.17□□□□□ -2.22
MBD4O95243 SNORA75.3-201ENST00000391231 150 ntBASIC1.17□□□□□ -2.22
MBD4O95243 MIR1287-201ENST00000408492 90 ntBASIC1.17□□□□□ -2.22
MBD4O95243 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC1.17□□□□□ -2.22
MBD4O95243 MTCO1P5-201ENST00000433573 344 ntBASIC1.17□□□□□ -2.22
MBD4O95243 RNU7-41P-201ENST00000515917 61 ntBASIC1.17□□□□□ -2.22
MBD4O95243 MIR4661-201ENST00000582720 75 ntBASIC1.17□□□□□ -2.22
MBD4O95243 AL512605.2-201ENST00000592972 256 ntBASIC1.17□□□□□ -2.22
MBD4O95243 RNU6-514P-201ENST00000384208 107 ntBASIC1.16□□□□□ -2.22
MBD4O95243 SNORA53-201ENST00000391141 249 ntBASIC1.16□□□□□ -2.22
MBD4O95243 MTCO2P33-201ENST00000402100 465 ntBASIC1.16□□□□□ -2.22
MBD4O95243 MRPL35P3-201ENST00000421557 364 ntBASIC1.16□□□□□ -2.22
MBD4O95243 RNU6-1143P-201ENST00000516125 104 ntBASIC1.16□□□□□ -2.22
MBD4O95243 RNU6-830P-201ENST00000516353 107 ntBASIC1.16□□□□□ -2.22
MBD4O95243 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC1.16□□□□□ -2.22
MBD4O95243 MIR3171-201ENST00000584270 74 ntBASIC1.16□□□□□ -2.22
MBD4O95243 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.16□□□□□ -2.22
MBD4O95243 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
MBD4O95243 RNU6-1205P-201ENST00000363625 106 ntBASIC1.15□□□□□ -2.23
MBD4O95243 Y_RNA.191-201ENST00000363972 113 ntBASIC1.15□□□□□ -2.23
MBD4O95243 SNORA22-201ENST00000383907 134 ntBASIC1.15□□□□□ -2.23
MBD4O95243 SNORA22C-201ENST00000384614 134 ntBASIC1.15□□□□□ -2.23
MBD4O95243 RNU6-763P-201ENST00000390865 106 ntBASIC1.15□□□□□ -2.23
MBD4O95243 RPS29P28-201ENST00000446439 141 ntBASIC1.15□□□□□ -2.23
MBD4O95243 AC023449.1-201ENST00000454464 154 ntBASIC1.15□□□□□ -2.23
MBD4O95243 SNORD11-201ENST00000459124 84 ntBASIC1.15□□□□□ -2.23
MBD4O95243 MRPS35P2-201ENST00000508242 191 ntBASIC1.15□□□□□ -2.23
MBD4O95243 RNU2-31P-201ENST00000516954 155 ntBASIC1.15□□□□□ -2.23
MBD4O95243 AC131281.1-201ENST00000522984 164 ntBASIC1.15□□□□□ -2.23
MBD4O95243 AP003716.2-201ENST00000528260 108 ntBASIC1.15□□□□□ -2.23
MBD4O95243 Pinc.1-201ENST00000616452 154 ntBASIC1.15□□□□□ -2.23
MBD4O95243 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
MBD4O95243 SNORA25.1-201ENST00000362326 128 ntBASIC1.14□□□□□ -2.23
MBD4O95243 RNU6-770P-201ENST00000363929 105 ntBASIC1.14□□□□□ -2.23
MBD4O95243 Y_RNA.216-201ENST00000364205 93 ntBASIC1.14□□□□□ -2.23
MBD4O95243 RNU6-121P-201ENST00000410525 99 ntBASIC1.14□□□□□ -2.23
MBD4O95243 SNRPGP14-201ENST00000435400 219 ntBASIC1.14□□□□□ -2.23
MBD4O95243 AC113195.1-201ENST00000579952 141 ntBASIC1.14□□□□□ -2.23
MBD4O95243 SEPT14P17-201ENST00000617978 177 ntBASIC1.14□□□□□ -2.23
MBD4O95243 AC134026.1-201ENST00000623249 2239 ntBASIC1.13□□□□□ -2.23
MBD4O95243 Y_RNA.105-201ENST00000363182 111 ntBASIC1.13□□□□□ -2.23
MBD4O95243 RNU6-268P-201ENST00000364174 107 ntBASIC1.13□□□□□ -2.23
MBD4O95243 RNU6-326P-201ENST00000365480 107 ntBASIC1.13□□□□□ -2.23
MBD4O95243 Y_RNA.370-201ENST00000365589 108 ntBASIC1.13□□□□□ -2.23
MBD4O95243 MIR1278-201ENST00000408753 81 ntBASIC1.13□□□□□ -2.23
MBD4O95243 SNORD124-201ENST00000459577 104 ntBASIC1.13□□□□□ -2.23
MBD4O95243 RNY3P15-201ENST00000516297 97 ntBASIC1.13□□□□□ -2.23
MBD4O95243 RNU6-113P-201ENST00000516653 101 ntBASIC1.13□□□□□ -2.23
MBD4O95243 MIR4452-201ENST00000583004 71 ntBASIC1.13□□□□□ -2.23
MBD4O95243 AC013791.1-201ENST00000616619 62 ntBASIC1.13□□□□□ -2.23
MBD4O95243 AC008133.2-201ENST00000624540 351 ntBASIC1.13□□□□□ -2.23
MBD4O95243 MIR373-201ENST00000362273 69 ntBASIC1.12□□□□□ -2.23
MBD4O95243 Y_RNA.19-201ENST00000362462 99 ntBASIC1.12□□□□□ -2.23
MBD4O95243 SNORA25.3-201ENST00000363205 127 ntBASIC1.12□□□□□ -2.23
MBD4O95243 Y_RNA.202-201ENST00000364083 110 ntBASIC1.12□□□□□ -2.23
MBD4O95243 Y_RNA.210-201ENST00000364161 110 ntBASIC1.12□□□□□ -2.23
MBD4O95243 Y_RNA.527-201ENST00000384573 102 ntBASIC1.12□□□□□ -2.23
MBD4O95243 RNU6-1067P-201ENST00000384752 107 ntBASIC1.12□□□□□ -2.23
MBD4O95243 MIR520E-201ENST00000384867 87 ntBASIC1.12□□□□□ -2.23
MBD4O95243 POLR2J4-204ENST00000418424 324 ntBASIC1.12□□□□□ -2.23
MBD4O95243 ELOCP20-201ENST00000422460 345 ntBASIC1.12□□□□□ -2.23
MBD4O95243 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.12□□□□□ -2.23
MBD4O95243 RNU11-2P-201ENST00000516898 142 ntBASIC1.12□□□□□ -2.23
MBD4O95243 AC020661.2-201ENST00000560114 134 ntBASIC1.12□□□□□ -2.23
MBD4O95243 MIR3973-201ENST00000579824 107 ntBASIC1.12□□□□□ -2.23
MBD4O95243 MIR4680-201ENST00000580906 66 ntBASIC1.12□□□□□ -2.23
MBD4O95243 AC006441.5-201ENST00000612680 209 ntBASIC1.12□□□□□ -2.23
MBD4O95243 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.12□□□□□ -2.23
MBD4O95243 MIR4251-201ENST00000635819 61 ntBASIC1.12□□□□□ -2.23
MBD4O95243 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
MBD4O95243 RNU6-1272P-201ENST00000362776 107 ntBASIC1.11□□□□□ -2.23
MBD4O95243 Y_RNA.214-201ENST00000364201 112 ntBASIC1.11□□□□□ -2.23
MBD4O95243 Y_RNA.224-201ENST00000364308 111 ntBASIC1.11□□□□□ -2.23
MBD4O95243 Y_RNA.330-201ENST00000365230 109 ntBASIC1.11□□□□□ -2.23
MBD4O95243 MIR532-201ENST00000385025 91 ntBASIC1.11□□□□□ -2.23
MBD4O95243 SNORD72-201ENST00000390994 80 ntBASIC1.11□□□□□ -2.23
MBD4O95243 MIR1185-1-201ENST00000408598 86 ntBASIC1.11□□□□□ -2.23
MBD4O95243 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC1.11□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 304.1 ms