Protein–RNA interactions for Protein: O75127

PTCD1, Pentatricopeptide repeat-containing protein 1, mitochondrial, humanhuman

Known RBP Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1O75127 U4.3-201ENST00000621047 82 ntBASIC3.3□□□□□ -1.88
PTCD1O75127 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC3.3□□□□□ -1.88
PTCD1O75127 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
PTCD1O75127 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
PTCD1O75127 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
PTCD1O75127 RNU6-23P-201ENST00000363283 107 ntBASIC3.29□□□□□ -1.88
PTCD1O75127 RNA5SP493-201ENST00000364115 91 ntBASIC3.29□□□□□ -1.88
PTCD1O75127 Y_RNA.344-201ENST00000365381 112 ntBASIC3.29□□□□□ -1.88
PTCD1O75127 RNU6-1124P-201ENST00000384169 107 ntBASIC3.29□□□□□ -1.88
PTCD1O75127 SNORD77.3-201ENST00000391113 65 ntBASIC3.29□□□□□ -1.88
PTCD1O75127 RNU4-53P-201ENST00000410828 140 ntBASIC3.29□□□□□ -1.88
PTCD1O75127 AC092427.1-202ENST00000430569 476 ntBASIC3.29□□□□□ -1.88
PTCD1O75127 PGBD4P5-201ENST00000445958 426 ntBASIC3.29□□□□□ -1.88
PTCD1O75127 snoU13.26-201ENST00000459452 105 ntBASIC3.29□□□□□ -1.88
PTCD1O75127 AL049830.1-201ENST00000468034 425 ntBASIC3.29□□□□□ -1.88
PTCD1O75127 RNU6-904P-201ENST00000516206 101 ntBASIC3.29□□□□□ -1.88
PTCD1O75127 SNORA9.3-201ENST00000516383 129 ntBASIC3.29□□□□□ -1.88
PTCD1O75127 Y_RNA.714-201ENST00000517065 90 ntBASIC3.29□□□□□ -1.88
PTCD1O75127 AC068339.1-201ENST00000526965 141 ntBASIC3.29□□□□□ -1.88
PTCD1O75127 MIR3186-201ENST00000577404 85 ntBASIC3.29□□□□□ -1.88
PTCD1O75127 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC3.29□□□□□ -1.88
PTCD1O75127 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
PTCD1O75127 AC092435.3-201ENST00000565538 3654 ntBASIC3.28□□□□□ -1.88
PTCD1O75127 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3.28□□□□□ -1.88
PTCD1O75127 SNORA1B-201ENST00000362535 133 ntBASIC3.28□□□□□ -1.88
PTCD1O75127 RNU6-1134P-201ENST00000365156 101 ntBASIC3.28□□□□□ -1.88
PTCD1O75127 SNORA26.7-201ENST00000391288 122 ntBASIC3.28□□□□□ -1.88
PTCD1O75127 CST2P1-201ENST00000425770 87 ntBASIC3.28□□□□□ -1.88
PTCD1O75127 RNU7-94P-201ENST00000459576 63 ntBASIC3.28□□□□□ -1.88
PTCD1O75127 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC3.28□□□□□ -1.88
PTCD1O75127 RNY4P20-201ENST00000516678 93 ntBASIC3.28□□□□□ -1.88
PTCD1O75127 RNU6-158P-201ENST00000517104 100 ntBASIC3.28□□□□□ -1.88
PTCD1O75127 AP002004.2-201ENST00000531656 154 ntBASIC3.28□□□□□ -1.88
PTCD1O75127 FAM71BP1-201ENST00000604431 523 ntBASIC3.28□□□□□ -1.88
PTCD1O75127 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.28□□□□□ -1.88
PTCD1O75127 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.28□□□□□ -1.88
PTCD1O75127 Y_RNA.818-201ENST00000618813 71 ntBASIC3.28□□□□□ -1.88
PTCD1O75127 MIR7843-201ENST00000622274 79 ntBASIC3.28□□□□□ -1.88
PTCD1O75127 AC108206.1-201ENST00000570186 4159 ntBASIC3.28□□□□□ -1.88
PTCD1O75127 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
PTCD1O75127 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC3.28□□□□□ -1.88
PTCD1O75127 Y_RNA.198-201ENST00000364013 98 ntBASIC3.27□□□□□ -1.89
PTCD1O75127 MIR802-201ENST00000390235 94 ntBASIC3.27□□□□□ -1.89
PTCD1O75127 AC107297.1-201ENST00000459991 176 ntBASIC3.27□□□□□ -1.89
PTCD1O75127 AC024995.1-201ENST00000523014 93 ntBASIC3.27□□□□□ -1.89
PTCD1O75127 AL358944.1-201ENST00000528537 144 ntBASIC3.27□□□□□ -1.89
PTCD1O75127 AC026271.5-201ENST00000577873 130 ntBASIC3.27□□□□□ -1.89
PTCD1O75127 AC008507.4-201ENST00000585464 127 ntBASIC3.27□□□□□ -1.89
PTCD1O75127 RNU6-414P-201ENST00000363705 104 ntBASIC3.26□□□□□ -1.89
PTCD1O75127 RNU6-1292P-201ENST00000383856 107 ntBASIC3.26□□□□□ -1.89
PTCD1O75127 RNU6-813P-201ENST00000384691 107 ntBASIC3.26□□□□□ -1.89
PTCD1O75127 MIR1255A-201ENST00000408338 113 ntBASIC3.26□□□□□ -1.89
PTCD1O75127 Y_RNA.666-201ENST00000516187 112 ntBASIC3.26□□□□□ -1.89
PTCD1O75127 RNU6-113P-201ENST00000516653 101 ntBASIC3.26□□□□□ -1.89
PTCD1O75127 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
PTCD1O75127 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC3.26□□□□□ -1.89
PTCD1O75127 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
PTCD1O75127 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
PTCD1O75127 SNORD68-201ENST00000363214 84 ntBASIC3.25□□□□□ -1.89
PTCD1O75127 Y_RNA.221-201ENST00000364248 96 ntBASIC3.25□□□□□ -1.89
PTCD1O75127 RNU1-91P-201ENST00000364746 163 ntBASIC3.25□□□□□ -1.89
PTCD1O75127 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3.25□□□□□ -1.89
PTCD1O75127 TRIAP1P1-201ENST00000427062 225 ntBASIC3.25□□□□□ -1.89
PTCD1O75127 UBBP3-201ENST00000445497 241 ntBASIC3.25□□□□□ -1.89
PTCD1O75127 RNU6-893P-201ENST00000458841 100 ntBASIC3.25□□□□□ -1.89
PTCD1O75127 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC3.25□□□□□ -1.89
PTCD1O75127 AC022202.1-201ENST00000613515 211 ntBASIC3.25□□□□□ -1.89
PTCD1O75127 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
PTCD1O75127 Y_RNA.17-201ENST00000362433 111 ntBASIC3.24□□□□□ -1.89
PTCD1O75127 RNU6-1104P-201ENST00000384723 104 ntBASIC3.24□□□□□ -1.89
PTCD1O75127 snoU13.15-201ENST00000459407 104 ntBASIC3.24□□□□□ -1.89
PTCD1O75127 IGKV3-31-201ENST00000523109 329 ntBASIC3.24□□□□□ -1.89
PTCD1O75127 AC022523.2-201ENST00000561045 150 ntBASIC3.24□□□□□ -1.89
PTCD1O75127 MIR3169-201ENST00000578032 83 ntBASIC3.24□□□□□ -1.89
PTCD1O75127 ICE2P2-201ENST00000483823 2787 ntBASIC3.24□□□□□ -1.89
PTCD1O75127 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
PTCD1O75127 Y_RNA.73-201ENST00000362910 113 ntBASIC3.23□□□□□ -1.89
PTCD1O75127 RNU6-888P-201ENST00000363010 101 ntBASIC3.23□□□□□ -1.89
PTCD1O75127 MIR522-201ENST00000385071 87 ntBASIC3.23□□□□□ -1.89
PTCD1O75127 RNU6ATAC37P-201ENST00000408328 131 ntBASIC3.23□□□□□ -1.89
PTCD1O75127 AC099677.2-201ENST00000436385 175 ntBASIC3.23□□□□□ -1.89
PTCD1O75127 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC3.23□□□□□ -1.89
PTCD1O75127 RNU6-693P-201ENST00000516134 107 ntBASIC3.23□□□□□ -1.89
PTCD1O75127 AC087685.1-201ENST00000587507 141 ntBASIC3.23□□□□□ -1.89
PTCD1O75127 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.23□□□□□ -1.89
PTCD1O75127 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
PTCD1O75127 MIR302B-201ENST00000362188 73 ntBASIC3.22□□□□□ -1.89
PTCD1O75127 Y_RNA.78-201ENST00000362970 110 ntBASIC3.22□□□□□ -1.89
PTCD1O75127 RNY4P6-201ENST00000363667 96 ntBASIC3.22□□□□□ -1.89
PTCD1O75127 Y_RNA.242-201ENST00000364473 110 ntBASIC3.22□□□□□ -1.89
PTCD1O75127 Y_RNA.290-201ENST00000364879 114 ntBASIC3.22□□□□□ -1.89
PTCD1O75127 RNA5SP210-201ENST00000391034 120 ntBASIC3.22□□□□□ -1.89
PTCD1O75127 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC3.22□□□□□ -1.89
PTCD1O75127 RNU7-26P-201ENST00000458980 63 ntBASIC3.22□□□□□ -1.89
PTCD1O75127 UBL5P3-201ENST00000475112 231 ntBASIC3.22□□□□□ -1.89
PTCD1O75127 ZNF720P1-201ENST00000562403 1939 ntBASIC3.22□□□□□ -1.89
PTCD1O75127 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.9
PTCD1O75127 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
PTCD1O75127 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC3.21□□□□□ -1.9
PTCD1O75127 RNU6-1084P-201ENST00000362498 107 ntBASIC3.21□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms