Protein–RNA interactions for Protein: O60906

SMPD2, Sphingomyelin phosphodiesterase 2, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD2O60906 RNU4-57P-201ENST00000515980 135 ntBASIC0.32□□□□□ -2.36
SMPD2O60906 RNU6-718P-201ENST00000516166 105 ntBASIC0.32□□□□□ -2.36
SMPD2O60906 RNU6-977P-201ENST00000516411 103 ntBASIC0.32□□□□□ -2.36
SMPD2O60906 Y_RNA.691-201ENST00000516611 103 ntBASIC0.32□□□□□ -2.36
SMPD2O60906 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.32□□□□□ -2.36
SMPD2O60906 MIR4264-201ENST00000583520 66 ntBASIC0.32□□□□□ -2.36
SMPD2O60906 MIRLET7D-201ENST00000362263 87 ntBASIC0.31□□□□□ -2.36
SMPD2O60906 RNU6-268P-201ENST00000364174 107 ntBASIC0.31□□□□□ -2.36
SMPD2O60906 Y_RNA.280-201ENST00000364765 112 ntBASIC0.31□□□□□ -2.36
SMPD2O60906 RNU6-934P-201ENST00000365154 107 ntBASIC0.31□□□□□ -2.36
SMPD2O60906 RNU6-1327P-201ENST00000365302 105 ntBASIC0.31□□□□□ -2.36
SMPD2O60906 RNA5SP95-201ENST00000410319 137 ntBASIC0.31□□□□□ -2.36
SMPD2O60906 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.31□□□□□ -2.36
SMPD2O60906 AC023932.2-201ENST00000603176 175 ntBASIC0.31□□□□□ -2.36
SMPD2O60906 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC0.31□□□□□ -2.36
SMPD2O60906 U2.1-201ENST00000618978 145 ntBASIC0.31□□□□□ -2.36
SMPD2O60906 AC098679.4-201ENST00000624241 654 ntBASIC0.31□□□□□ -2.36
SMPD2O60906 Y_RNA.166-201ENST00000363730 102 ntBASIC0.3□□□□□ -2.36
SMPD2O60906 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC0.3□□□□□ -2.36
SMPD2O60906 MIR548F1-201ENST00000408667 84 ntBASIC0.3□□□□□ -2.36
SMPD2O60906 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.3□□□□□ -2.36
SMPD2O60906 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC0.3□□□□□ -2.36
SMPD2O60906 AC099799.1-201ENST00000439809 192 ntBASIC0.3□□□□□ -2.36
SMPD2O60906 RPL23AP54-201ENST00000495129 419 ntBASIC0.3□□□□□ -2.36
SMPD2O60906 SNORA68.3-201ENST00000515906 83 ntBASIC0.3□□□□□ -2.36
SMPD2O60906 AC127455.1-201ENST00000565496 145 ntBASIC0.3□□□□□ -2.36
SMPD2O60906 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC0.3□□□□□ -2.36
SMPD2O60906 AC008507.4-201ENST00000585464 127 ntBASIC0.3□□□□□ -2.36
SMPD2O60906 MIR4791-201ENST00000607666 84 ntBASIC0.3□□□□□ -2.36
SMPD2O60906 uc_338.4-201ENST00000616635 176 ntBASIC0.3□□□□□ -2.36
SMPD2O60906 TPTEP1-208ENST00000636884 213 ntBASIC0.3□□□□□ -2.36
SMPD2O60906 MIR18A-201ENST00000362310 71 ntBASIC0.29□□□□□ -2.36
SMPD2O60906 RNU6-1209P-201ENST00000363655 107 ntBASIC0.29□□□□□ -2.36
SMPD2O60906 RNU6-1175P-201ENST00000365200 107 ntBASIC0.29□□□□□ -2.36
SMPD2O60906 Y_RNA.462-201ENST00000384268 102 ntBASIC0.29□□□□□ -2.36
SMPD2O60906 MIR520F-201ENST00000384824 87 ntBASIC0.29□□□□□ -2.36
SMPD2O60906 MIR520H-201ENST00000385126 88 ntBASIC0.29□□□□□ -2.36
SMPD2O60906 MTCO2P27-201ENST00000420740 428 ntBASIC0.29□□□□□ -2.36
SMPD2O60906 HMGN1P10-201ENST00000474557 553 ntBASIC0.29□□□□□ -2.36
SMPD2O60906 RNU7-115P-201ENST00000516433 55 ntBASIC0.29□□□□□ -2.36
SMPD2O60906 AC024405.2-202ENST00000532731 184 ntBASIC0.29□□□□□ -2.36
SMPD2O60906 MIR548AO-201ENST00000579992 96 ntBASIC0.29□□□□□ -2.36
SMPD2O60906 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC0.29□□□□□ -2.36
SMPD2O60906 AC006441.5-201ENST00000612680 209 ntBASIC0.29□□□□□ -2.36
SMPD2O60906 AC133104.2-201ENST00000615272 193 ntBASIC0.29□□□□□ -2.36
SMPD2O60906 MTND1P7-201ENST00000632801 297 ntBASIC0.29□□□□□ -2.36
SMPD2O60906 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.29□□□□□ -2.36
SMPD2O60906 RNU6-369P-201ENST00000362515 102 ntBASIC0.28□□□□□ -2.36
SMPD2O60906 RNU6-1188P-201ENST00000363795 107 ntBASIC0.28□□□□□ -2.36
SMPD2O60906 SNORD116-4-201ENST00000384733 96 ntBASIC0.28□□□□□ -2.36
SMPD2O60906 Y_RNA.570-201ENST00000384750 101 ntBASIC0.28□□□□□ -2.36
SMPD2O60906 Y_RNA.646-201ENST00000410980 101 ntBASIC0.28□□□□□ -2.36
SMPD2O60906 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC0.28□□□□□ -2.36
SMPD2O60906 RNU6-1213P-201ENST00000517075 94 ntBASIC0.28□□□□□ -2.36
SMPD2O60906 MIR2909-201ENST00000617113 69 ntBASIC0.28□□□□□ -2.36
SMPD2O60906 RNU6-845P-201ENST00000362578 103 ntBASIC0.27□□□□□ -2.37
SMPD2O60906 RNU4-67P-201ENST00000364569 141 ntBASIC0.27□□□□□ -2.37
SMPD2O60906 SNORA63C-201ENST00000364578 129 ntBASIC0.27□□□□□ -2.37
SMPD2O60906 RNU6-310P-201ENST00000384655 107 ntBASIC0.27□□□□□ -2.37
SMPD2O60906 MTCO2P33-201ENST00000402100 465 ntBASIC0.27□□□□□ -2.37
SMPD2O60906 RNU7-169P-201ENST00000459456 61 ntBASIC0.27□□□□□ -2.37
SMPD2O60906 AC107297.1-201ENST00000459991 176 ntBASIC0.27□□□□□ -2.37
SMPD2O60906 MIR3612-201ENST00000579753 87 ntBASIC0.27□□□□□ -2.37
SMPD2O60906 MIR4423-201ENST00000580922 80 ntBASIC0.27□□□□□ -2.37
SMPD2O60906 AL080274.1-201ENST00000605565 220 ntBASIC0.27□□□□□ -2.37
SMPD2O60906 AL162730.1-201ENST00000605734 292 ntBASIC0.27□□□□□ -2.37
SMPD2O60906 MIR548AY-201ENST00000617669 107 ntBASIC0.27□□□□□ -2.37
SMPD2O60906 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.26□□□□□ -2.37
SMPD2O60906 RNU6-674P-201ENST00000363831 107 ntBASIC0.26□□□□□ -2.37
SMPD2O60906 MIR570-201ENST00000384917 97 ntBASIC0.26□□□□□ -2.37
SMPD2O60906 RNU6-370P-201ENST00000411008 104 ntBASIC0.26□□□□□ -2.37
SMPD2O60906 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.26□□□□□ -2.37
SMPD2O60906 AC002350.1-201ENST00000490759 375 ntBASIC0.26□□□□□ -2.37
SMPD2O60906 AC091951.2-201ENST00000500762 203 ntBASIC0.26□□□□□ -2.37
SMPD2O60906 RNU2-13P-201ENST00000515909 113 ntBASIC0.26□□□□□ -2.37
SMPD2O60906 RNA5SP395-201ENST00000516567 118 ntBASIC0.26□□□□□ -2.37
SMPD2O60906 AC011476.5-201ENST00000615594 130 ntBASIC0.26□□□□□ -2.37
SMPD2O60906 AC092634.7-201ENST00000621022 103 ntBASIC0.26□□□□□ -2.37
SMPD2O60906 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC0.26□□□□□ -2.37
SMPD2O60906 Y_RNA.314-201ENST00000365114 102 ntBASIC0.25□□□□□ -2.37
SMPD2O60906 Y_RNA.412-201ENST00000384001 104 ntBASIC0.25□□□□□ -2.37
SMPD2O60906 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.25□□□□□ -2.37
SMPD2O60906 MTCO3P10-201ENST00000455912 772 ntBASIC0.25□□□□□ -2.37
SMPD2O60906 NDUFA4P2-201ENST00000489989 244 ntBASIC0.25□□□□□ -2.37
SMPD2O60906 RNU6-966P-201ENST00000516479 104 ntBASIC0.25□□□□□ -2.37
SMPD2O60906 MIR4804-201ENST00000581683 73 ntBASIC0.25□□□□□ -2.37
SMPD2O60906 AL355297.3-201ENST00000604082 446 ntBASIC0.25□□□□□ -2.37
SMPD2O60906 AC010205.1-201ENST00000616668 449 ntBASIC0.25□□□□□ -2.37
SMPD2O60906 U6.92-201ENST00000636464 89 ntBASIC0.25□□□□□ -2.37
SMPD2O60906 AC073869.6-201ENST00000640656 341 ntBASIC0.25□□□□□ -2.37
SMPD2O60906 RNU6-490P-201ENST00000362985 107 ntBASIC0.24□□□□□ -2.37
SMPD2O60906 SNORD45.3-201ENST00000363836 72 ntBASIC0.24□□□□□ -2.37
SMPD2O60906 U8.7-201ENST00000364940 136 ntBASIC0.24□□□□□ -2.37
SMPD2O60906 RPL30P15-201ENST00000457129 321 ntBASIC0.24□□□□□ -2.37
SMPD2O60906 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.24□□□□□ -2.37
SMPD2O60906 snoU13.16-201ENST00000459350 104 ntBASIC0.24□□□□□ -2.37
SMPD2O60906 AC108740.1-201ENST00000498629 225 ntBASIC0.24□□□□□ -2.37
SMPD2O60906 RNU7-181P-201ENST00000517234 74 ntBASIC0.24□□□□□ -2.37
SMPD2O60906 VN1R91P-201ENST00000594377 169 ntBASIC0.24□□□□□ -2.37
SMPD2O60906 AL360085.1-201ENST00000604713 532 ntBASIC0.24□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 140.2 ms